RNA–Protein interactions for RNA: ENST00000440223.5

UBE2F-214, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 830 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-214ENST00000440223 CHMP5Q9NZZ3 219 aa18.66■□□□□ 0.58
UBE2F-214ENST00000440223 NYAP2Q9P242 653 aa18.66■□□□□ 0.58
UBE2F-214ENST00000440223 CCDC196A0A1B0GTZ2 297 aa18.65■□□□□ 0.58
UBE2F-214ENST00000440223 FCGRTP55899 365 aa18.65■□□□□ 0.58
UBE2F-214ENST00000440223 PPP2R5BQ15173 497 aa18.65■□□□□ 0.58
UBE2F-214ENST00000440223 CATSPERGQ6ZRH7 1159 aa18.65■□□□□ 0.58
UBE2F-214ENST00000440223 MICU3Q86XE3 530 aa18.65■□□□□ 0.58
UBE2F-214ENST00000440223 SIAH1Q8IUQ4 282 aa18.65■□□□□ 0.58
UBE2F-214ENST00000440223 ZNF654Q8IZM8 581 aa18.65■□□□□ 0.58
UBE2F-214ENST00000440223 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.65■□□□□ 0.58
UBE2F-214ENST00000440223 BRPF3Q9ULD4 1205 aa18.65■□□□□ 0.58
UBE2F-214ENST00000440223 NID2Q14112 1375 aa18.65■□□□□ 0.58
UBE2F-214ENST00000440223 IGKV6D-41A0A0C4DH26 115 aa18.64■□□□□ 0.57
UBE2F-214ENST00000440223 WDR46O15213 610 aaKnown RBP18.64■□□□□ 0.57
UBE2F-214ENST00000440223 FMNL1O95466 1100 aaPredicted RBP18.64■□□□□ 0.57
UBE2F-214ENST00000440223 HOXD10P28358 340 aa18.64■□□□□ 0.57
UBE2F-214ENST00000440223 PSMC4P43686 418 aa18.64■□□□□ 0.57
UBE2F-214ENST00000440223 CCT2P78371 535 aaKnown RBP18.64■□□□□ 0.57
UBE2F-214ENST00000440223 HMGN5P82970 282 aaKnown RBP18.64■□□□□ 0.57
UBE2F-214ENST00000440223 SCRN1Q12765 414 aa18.64■□□□□ 0.57
UBE2F-214ENST00000440223 NKX2-3Q8TAU0 364 aa18.64■□□□□ 0.57
UBE2F-214ENST00000440223 ANKS1AQ92625 1134 aa18.64■□□□□ 0.57
UBE2F-214ENST00000440223 P2RX7Q99572 595 aaKnown RBP18.64■□□□□ 0.57
UBE2F-214ENST00000440223 TANGO6Q9C0B7 1094 aa18.64■□□□□ 0.57
UBE2F-214ENST00000440223 ARHGAP39Q9C0H5 1083 aa18.64■□□□□ 0.57
UBE2F-214ENST00000440223 TTLL1O95922 423 aa18.63■□□□□ 0.57
UBE2F-214ENST00000440223 PDIA4P13667 645 aaKnown RBP18.63■□□□□ 0.57
UBE2F-214ENST00000440223 PRMT2P55345 433 aa18.63■□□□□ 0.57
UBE2F-214ENST00000440223 NUCB2P80303 420 aa18.63■□□□□ 0.57
UBE2F-214ENST00000440223 RTN1Q16799 776 aa18.63■□□□□ 0.57
UBE2F-214ENST00000440223 NUP133Q8WUM0 1156 aa18.63■□□□□ 0.57
UBE2F-214ENST00000440223 CEP95Q96GE4 821 aa18.63■□□□□ 0.57
UBE2F-214ENST00000440223 RBM28Q9NW13 759 aaKnown RBP18.63■□□□□ 0.57
UBE2F-214ENST00000440223 MTMR4Q9NYA4 1195 aa18.63■□□□□ 0.57
UBE2F-214ENST00000440223 MORF4L1Q9UBU8 362 aa18.63■□□□□ 0.57
UBE2F-214ENST00000440223 SYNPO2Q9UMS6 1093 aa18.63■□□□□ 0.57
UBE2F-214ENST00000440223 STX8Q9UNK0 236 aa18.63■□□□□ 0.57
UBE2F-214ENST00000440223 PTPN22Q9Y2R2 807 aa18.63■□□□□ 0.57
UBE2F-214ENST00000440223 PARP14Q460N5 1801 aa18.63■□□□□ 0.57
UBE2F-214ENST00000440223 RAD21O60216 631 aa18.62■□□□□ 0.57
UBE2F-214ENST00000440223 TOP1P11387 765 aaKnown RBP18.62■□□□□ 0.57
UBE2F-214ENST00000440223 PDCP20941 246 aa18.62■□□□□ 0.57
UBE2F-214ENST00000440223 CAP1Q01518 475 aa18.62■□□□□ 0.57
UBE2F-214ENST00000440223 IFFO2Q5TF58 517 aa18.62■□□□□ 0.57
UBE2F-214ENST00000440223 SPICE1Q8N0Z3 855 aa18.62■□□□□ 0.57
UBE2F-214ENST00000440223 FAM184AQ8NB25 1140 aa18.62■□□□□ 0.57
UBE2F-214ENST00000440223 CTCFLQ8NI51 663 aaPredicted RBP18.62■□□□□ 0.57
UBE2F-214ENST00000440223 TRIM47Q96LD4 638 aa18.62■□□□□ 0.57
UBE2F-214ENST00000440223 CLIP2Q9UDT6 1046 aa18.62■□□□□ 0.57
UBE2F-214ENST00000440223 A0A0G2JMZ2 1700 aa18.62■□□□□ 0.57
UBE2F-214ENST00000440223 TNPO2O14787 897 aaKnown RBP18.61■□□□□ 0.57
UBE2F-214ENST00000440223 NMT2O60551 498 aa18.61■□□□□ 0.57
UBE2F-214ENST00000440223 ECM2O94769 699 aaPredicted RBP18.61■□□□□ 0.57
UBE2F-214ENST00000440223 GJB2P29033 226 aa18.61■□□□□ 0.57
UBE2F-214ENST00000440223 KIF5BP33176 963 aa18.61■□□□□ 0.57
UBE2F-214ENST00000440223 ST3GAL1Q11201 340 aa18.61■□□□□ 0.57
UBE2F-214ENST00000440223 LBX2Q6XYB7 198 aa18.61■□□□□ 0.57
UBE2F-214ENST00000440223 GPRC5AQ8NFJ5 357 aa18.61■□□□□ 0.57
UBE2F-214ENST00000440223 PAGR1Q9BTK6 254 aa18.61■□□□□ 0.57
UBE2F-214ENST00000440223 SENP2Q9HC62 589 aa18.61■□□□□ 0.57
UBE2F-214ENST00000440223 HPS5Q9UPZ3 1129 aa18.61■□□□□ 0.57
UBE2F-214ENST00000440223 MYPNQ86TC9 1320 aa18.6■□□□□ 0.57
UBE2F-214ENST00000440223 COG2Q14746 738 aa18.6■□□□□ 0.57
UBE2F-214ENST00000440223 KIAA1755Q5JYT7 1200 aa18.6■□□□□ 0.57
UBE2F-214ENST00000440223 RAB11FIP4Q86YS3 637 aa18.6■□□□□ 0.57
UBE2F-214ENST00000440223 PNMA1Q8ND90 353 aa18.6■□□□□ 0.57
UBE2F-214ENST00000440223 MKL1Q969V6 931 aa18.6■□□□□ 0.57
UBE2F-214ENST00000440223 NCOA5Q9HCD5 579 aaKnown RBP18.6■□□□□ 0.57
UBE2F-214ENST00000440223 IL17RBQ9NRM6 502 aa18.6■□□□□ 0.57
UBE2F-214ENST00000440223 HOXC10Q9NYD6 342 aa18.6■□□□□ 0.57
UBE2F-214ENST00000440223 SRRDQ9UH36 339 aa18.6■□□□□ 0.57
UBE2F-214ENST00000440223 RABGAP1Q9Y3P9 1069 aa18.6■□□□□ 0.57
UBE2F-214ENST00000440223 RLFQ13129 1914 aa18.6■□□□□ 0.57
UBE2F-214ENST00000440223 PTPDC1A2A3K4 754 aa18.59■□□□□ 0.57
UBE2F-214ENST00000440223 SPDYE16A6NNV3 312 aaPredicted RBP18.59■□□□□ 0.57
UBE2F-214ENST00000440223 FLOT1O75955 427 aa18.59■□□□□ 0.57
UBE2F-214ENST00000440223 CTGFP29279 349 aa18.59■□□□□ 0.57
UBE2F-214ENST00000440223 DDIT3P35638 169 aa18.59■□□□□ 0.57
UBE2F-214ENST00000440223 GNAQP50148 359 aa18.59■□□□□ 0.57
UBE2F-214ENST00000440223 ERVK-9P63128 1117 aa18.59■□□□□ 0.57
UBE2F-214ENST00000440223 ERVK-24P63145 666 aa18.59■□□□□ 0.57
UBE2F-214ENST00000440223 CCNA1P78396 465 aa18.59■□□□□ 0.57
UBE2F-214ENST00000440223 RCSD1Q6JBY9 416 aa18.59■□□□□ 0.57
UBE2F-214ENST00000440223 CCAR1Q8IX12 1150 aaKnown RBP18.59■□□□□ 0.57
UBE2F-214ENST00000440223 TRIM22Q8IYM9 498 aa18.59■□□□□ 0.57
UBE2F-214ENST00000440223 NSUN7Q8NE18 718 aaKnown RBP18.59■□□□□ 0.57
UBE2F-214ENST00000440223 COA7Q96BR5 231 aa18.59■□□□□ 0.57
UBE2F-214ENST00000440223 MAP3K14Q99558 947 aa18.59■□□□□ 0.57
UBE2F-214ENST00000440223 TMEM47Q9BQJ4 181 aa18.59■□□□□ 0.57
UBE2F-214ENST00000440223 MYL10Q9BUA6 226 aa18.59■□□□□ 0.57
UBE2F-214ENST00000440223 CCDC85CA6NKD9 419 aa18.58■□□□□ 0.56
UBE2F-214ENST00000440223 F5H6K3 240 aa18.58■□□□□ 0.56
UBE2F-214ENST00000440223 RXRAP19793 462 aa18.58■□□□□ 0.56
UBE2F-214ENST00000440223 KLRC3Q07444 240 aa18.58■□□□□ 0.56
UBE2F-214ENST00000440223 CCDC144CPQ8IYA2 1237 aa18.58■□□□□ 0.56
UBE2F-214ENST00000440223 LRRC47Q8N1G4 583 aaKnown RBP18.58■□□□□ 0.56
UBE2F-214ENST00000440223 MB21D1Q8N884 522 aa18.58■□□□□ 0.56
UBE2F-214ENST00000440223 FANCBQ8NB91 859 aa18.58■□□□□ 0.56
UBE2F-214ENST00000440223 GMCL1P1Q8NEA9 526 aa18.58■□□□□ 0.56
UBE2F-214ENST00000440223 SMARCC2Q8TAQ2 1214 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms