RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 RXRBP28702 533 aa15.24■□□□□ 0.03
PCNX3-202ENST00000439247 IL6STP40189 918 aaPredicted RBP15.24■□□□□ 0.03
PCNX3-202ENST00000439247 LIFRP42702 1097 aa15.24■□□□□ 0.03
PCNX3-202ENST00000439247 TUBB2AQ13885 445 aa15.24■□□□□ 0.03
PCNX3-202ENST00000439247 KCNJ12Q14500 433 aa15.24■□□□□ 0.03
PCNX3-202ENST00000439247 MAGEB6Q8N7X4 407 aa15.24■□□□□ 0.03
PCNX3-202ENST00000439247 TUBB2BQ9BVA1 445 aa15.24■□□□□ 0.03
PCNX3-202ENST00000439247 LRRC4BQ9NT99 713 aa15.24■□□□□ 0.03
PCNX3-202ENST00000439247 CCNL1Q9UK58 526 aaPredicted RBP15.24■□□□□ 0.03
PCNX3-202ENST00000439247 SAMM50Q9Y512 469 aa15.24■□□□□ 0.03
PCNX3-202ENST00000439247 SAR1BQ9Y6B6 198 aa15.24■□□□□ 0.03
PCNX3-202ENST00000439247 TCRBV5S4A2TA0A5A2 114 aa15.24■□□□□ 0.03
PCNX3-202ENST00000439247 ADAMTS3O15072 1205 aa15.24■□□□□ 0.03
PCNX3-202ENST00000439247 WTAPQ15007 396 aa15.24■□□□□ 0.03
PCNX3-202ENST00000439247 AATFQ9NY61 560 aaKnown RBP eCLIP15.24■□□□□ 0.03
PCNX3-202ENST00000439247 RIC1Q4ADV7 1423 aa15.24■□□□□ 0.03
PCNX3-202ENST00000439247 DEXIO95424 95 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 PPARDQ03181 441 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 TCP11X2Q5H9J9 407 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 SMCR8Q8TEV9 937 aaPredicted RBP15.23■□□□□ 0.03
PCNX3-202ENST00000439247 NELFBQ8WX92 580 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 WASF1Q92558 559 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 CNNM1Q9NRU3 951 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 SMARCAL1Q9NZC9 954 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 KLK7P49862 253 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 WDR59Q6PJI9 974 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 MFSD6Q6ZSS7 791 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 JAKMIP2Q96AA8 810 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 CCDC51Q96ER9 411 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 CRACR2AQ9BSW2 395 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 RIPOR2Q9Y4F9 1068 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 MACROD2A1Z1Q3 448 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 ITGA6P23229 1130 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 IRAK1P51617 712 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 PMS1P54277 932 aaKnown RBP15.23■□□□□ 0.03
PCNX3-202ENST00000439247 CYP27A1Q02318 531 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 TTF1Q15361 905 aaPredicted RBP15.23■□□□□ 0.03
PCNX3-202ENST00000439247 AKNAD1Q5T1N1 836 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 FAM196AQ6ZSG2 479 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 MIGA1Q8NAN2 632 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 FANCBQ8NB91 859 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 TTLL11Q8NHH1 800 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 CAGE1Q8TC20 777 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 PSMB7Q99436 277 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 LIMA1Q9UHB6 759 aaKnown RBP15.23■□□□□ 0.03
PCNX3-202ENST00000439247 ITIH6Q6UXX5 1313 aa15.23■□□□□ 0.03
PCNX3-202ENST00000439247 COL5A3P25940 1745 aaPredicted RBP15.22■□□□□ 0.03
PCNX3-202ENST00000439247 MATR3P43243 847 aaKnown RBP eCLIP15.22■□□□□ 0.03
PCNX3-202ENST00000439247 SLC7A5Q01650 507 aa15.22■□□□□ 0.03
PCNX3-202ENST00000439247 EFCAB13Q8IY85 973 aa15.22■□□□□ 0.03
PCNX3-202ENST00000439247 GSDMAQ96QA5 445 aa15.22■□□□□ 0.03
PCNX3-202ENST00000439247 CEP131Q9UPN4 1083 aa15.22■□□□□ 0.03
PCNX3-202ENST00000439247 GIGYF2Q6Y7W6 1299 aaKnown RBP15.22■□□□□ 0.03
PCNX3-202ENST00000439247 IRF2BP1Q8IU81 584 aa15.22■□□□□ 0.03
PCNX3-202ENST00000439247 ZNF654Q8IZM8 581 aa15.22■□□□□ 0.03
PCNX3-202ENST00000439247 ISCA1Q9BUE6 129 aa15.22■□□□□ 0.03
PCNX3-202ENST00000439247 AGPAT5Q9NUQ2 364 aa15.22■□□□□ 0.03
PCNX3-202ENST00000439247 GOLGA6CA6NDK9 693 aa15.21■□□□□ 0.03
PCNX3-202ENST00000439247 GSG1L2A8MUP6 293 aa15.21■□□□□ 0.03
PCNX3-202ENST00000439247 GOLGA6DP0CG33 693 aa15.21■□□□□ 0.03
PCNX3-202ENST00000439247 PTGDRQ13258 359 aa15.21■□□□□ 0.03
PCNX3-202ENST00000439247 UBE3CQ15386 1083 aa15.21■□□□□ 0.03
PCNX3-202ENST00000439247 VIPAS39Q9H9C1 493 aa15.21■□□□□ 0.03
PCNX3-202ENST00000439247 GOLGA6AQ9NYA3 693 aa15.21■□□□□ 0.03
PCNX3-202ENST00000439247 EHD2Q9NZN4 543 aa15.21■□□□□ 0.03
PCNX3-202ENST00000439247 MYO1AQ9UBC5 1043 aa15.21■□□□□ 0.03
PCNX3-202ENST00000439247 FAM169AQ9Y6X4 670 aa15.21■□□□□ 0.03
PCNX3-202ENST00000439247 PATL2C9JE40 543 aaKnown RBP15.21■□□□□ 0.03
PCNX3-202ENST00000439247 PSMD14O00487 310 aa15.21■□□□□ 0.03
PCNX3-202ENST00000439247 NPM3O75607 178 aaKnown RBP15.21■□□□□ 0.03
PCNX3-202ENST00000439247 PLEKHA8P1O95397 391 aa15.21■□□□□ 0.03
PCNX3-202ENST00000439247 PRCPP42785 496 aa15.21■□□□□ 0.03
PCNX3-202ENST00000439247 PAK1Q13153 545 aa15.21■□□□□ 0.03
PCNX3-202ENST00000439247 LCORLQ8N3X6 602 aa15.21■□□□□ 0.03
PCNX3-202ENST00000439247 CTCFLQ8NI51 663 aaPredicted RBP15.21■□□□□ 0.03
PCNX3-202ENST00000439247 FAM76AQ8TAV0 307 aa15.21■□□□□ 0.03
PCNX3-202ENST00000439247 JADE2Q9NQC1 790 aa15.21■□□□□ 0.03
PCNX3-202ENST00000439247 TDO2P48775 406 aa15.21■□□□□ 0.02
PCNX3-202ENST00000439247 PKN1Q16512 942 aa15.21■□□□□ 0.02
PCNX3-202ENST00000439247 IL17AQ16552 155 aa15.21■□□□□ 0.02
PCNX3-202ENST00000439247 CCNI2Q6ZMN8 369 aaPredicted RBP15.21■□□□□ 0.02
PCNX3-202ENST00000439247 KIAA1328Q86T90 577 aa15.21■□□□□ 0.02
PCNX3-202ENST00000439247 BCAS4Q8TDM0 211 aa15.21■□□□□ 0.02
PCNX3-202ENST00000439247 DMGDHQ9UI17 866 aaKnown RBP15.21■□□□□ 0.02
PCNX3-202ENST00000439247 V9GY48 417 aaPredicted RBP15.21■□□□□ 0.02
PCNX3-202ENST00000439247 NKRFO15226 690 aaKnown RBP eCLIP15.2■□□□□ 0.02
PCNX3-202ENST00000439247 ERLIN2O94905 339 aa15.2■□□□□ 0.02
PCNX3-202ENST00000439247 VEGFAP15692 232 aaPredicted RBP15.2■□□□□ 0.02
PCNX3-202ENST00000439247 SND1Q7KZF4 910 aaKnown RBP eCLIP15.2■□□□□ 0.02
PCNX3-202ENST00000439247 PLIN2Q99541 437 aa15.2■□□□□ 0.02
PCNX3-202ENST00000439247 DEF6Q9H4E7 631 aa15.2■□□□□ 0.02
PCNX3-202ENST00000439247 A0A087WUV0 522 aaPredicted RBP15.2■□□□□ 0.02
PCNX3-202ENST00000439247 GOLGA6BA6NDN3 693 aa15.2■□□□□ 0.02
PCNX3-202ENST00000439247 LRRC10BA6NIK2 292 aa15.2■□□□□ 0.02
PCNX3-202ENST00000439247 TUBB4BP68371 445 aa15.2■□□□□ 0.02
PCNX3-202ENST00000439247 MINDY4BA8MYZ0 360 aa15.19■□□□□ 0.02
PCNX3-202ENST00000439247 GNPATO15228 680 aa15.19■□□□□ 0.02
PCNX3-202ENST00000439247 CAMTA2O94983 1202 aa15.19■□□□□ 0.02
PCNX3-202ENST00000439247 KRT26Q7Z3Y9 468 aa15.19■□□□□ 0.02
PCNX3-202ENST00000439247 OR8K1Q8NGG5 319 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms