RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 ANO10Q9NW15 660 aa17.16■□□□□ 0.34
LINC00163-202ENST00000439088 GOLGB1Q14789 3259 aaKnown RBP17.16■□□□□ 0.34
LINC00163-202ENST00000439088 CCDC194A0A1B0GVG4 234 aa17.15■□□□□ 0.34
LINC00163-202ENST00000439088 WNT7AO00755 349 aa17.15■□□□□ 0.34
LINC00163-202ENST00000439088 GRIN1Q05586 938 aa17.15■□□□□ 0.34
LINC00163-202ENST00000439088 SIAH1Q8IUQ4 282 aa17.15■□□□□ 0.34
LINC00163-202ENST00000439088 ZBED3Q96IU2 234 aaPredicted RBP17.15■□□□□ 0.34
LINC00163-202ENST00000439088 CBX8Q9HC52 389 aa17.15■□□□□ 0.34
LINC00163-202ENST00000439088 ESYT2A0FGR8 921 aa17.15■□□□□ 0.34
LINC00163-202ENST00000439088 SMCO2A6NFE2 343 aa17.15■□□□□ 0.34
LINC00163-202ENST00000439088 ZNF165P49910 485 aa17.15■□□□□ 0.34
LINC00163-202ENST00000439088 ATP2C1P98194 919 aaPredicted RBP17.15■□□□□ 0.34
LINC00163-202ENST00000439088 SEPT2Q15019 361 aa17.15■□□□□ 0.34
LINC00163-202ENST00000439088 RBM26Q5T8P6 1007 aaKnown RBP17.15■□□□□ 0.34
LINC00163-202ENST00000439088 CSRNP2Q9H175 543 aa17.15■□□□□ 0.34
LINC00163-202ENST00000439088 DNAJC25Q9H1X3 360 aa17.15■□□□□ 0.34
LINC00163-202ENST00000439088 BCS1LQ9Y276 419 aa17.15■□□□□ 0.34
LINC00163-202ENST00000439088 MYH4Q9Y623 1939 aa17.14■□□□□ 0.34
LINC00163-202ENST00000439088 PTGDRQ13258 359 aa17.14■□□□□ 0.33
LINC00163-202ENST00000439088 SPECC1Q5M775 1068 aa17.14■□□□□ 0.33
LINC00163-202ENST00000439088 DCAF4Q8WV16 495 aa17.14■□□□□ 0.33
LINC00163-202ENST00000439088 LTBP3Q9NS15 1303 aa17.14■□□□□ 0.33
LINC00163-202ENST00000439088 PNMA6FA0A0J9YX94 578 aa17.14■□□□□ 0.33
LINC00163-202ENST00000439088 MYO1BO43795 1136 aa17.14■□□□□ 0.33
LINC00163-202ENST00000439088 PTGER2P43116 358 aa17.14■□□□□ 0.33
LINC00163-202ENST00000439088 CNTNAP1P78357 1384 aa17.14■□□□□ 0.33
LINC00163-202ENST00000439088 ICA1Q05084 483 aa17.14■□□□□ 0.33
LINC00163-202ENST00000439088 SHROOM1Q2M3G4 852 aaPredicted RBP17.14■□□□□ 0.33
LINC00163-202ENST00000439088 LONRF3Q496Y0 759 aa17.14■□□□□ 0.33
LINC00163-202ENST00000439088 KRBA2Q6ZNG9 492 aa17.14■□□□□ 0.33
LINC00163-202ENST00000439088 FAM83AQ86UY5 434 aa17.14■□□□□ 0.33
LINC00163-202ENST00000439088 ADGRF4Q8IZF3 695 aa17.14■□□□□ 0.33
LINC00163-202ENST00000439088 UPF1Q92900 1129 aaKnown RBP eCLIP17.14■□□□□ 0.33
LINC00163-202ENST00000439088 JMJD4Q9H9V9 463 aa17.14■□□□□ 0.33
LINC00163-202ENST00000439088 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.14■□□□□ 0.33
LINC00163-202ENST00000439088 USP25Q9UHP3 1055 aa17.14■□□□□ 0.33
LINC00163-202ENST00000439088 GDF11O95390 407 aa17.13■□□□□ 0.33
LINC00163-202ENST00000439088 CCDC96Q2M329 555 aa17.13■□□□□ 0.33
LINC00163-202ENST00000439088 TTBK2Q6IQ55 1244 aa17.13■□□□□ 0.33
LINC00163-202ENST00000439088 KRT25Q7Z3Z0 450 aa17.13■□□□□ 0.33
LINC00163-202ENST00000439088 LUZP1Q86V48 1076 aa17.13■□□□□ 0.33
LINC00163-202ENST00000439088 RASGRP4Q8TDF6 673 aa17.13■□□□□ 0.33
LINC00163-202ENST00000439088 MCM7P33993 719 aa17.12■□□□□ 0.33
LINC00163-202ENST00000439088 SLFN13Q68D06 897 aa17.12■□□□□ 0.33
LINC00163-202ENST00000439088 CNNM3Q8NE01 707 aa17.12■□□□□ 0.33
LINC00163-202ENST00000439088 GMCL1P1Q8NEA9 526 aa17.12■□□□□ 0.33
LINC00163-202ENST00000439088 ERCC4Q92889 916 aaPredicted RBP17.12■□□□□ 0.33
LINC00163-202ENST00000439088 MTMR8Q96EF0 704 aa17.12■□□□□ 0.33
LINC00163-202ENST00000439088 TBC1D12O60347 775 aa17.12■□□□□ 0.33
LINC00163-202ENST00000439088 GH2P01242 217 aa17.12■□□□□ 0.33
LINC00163-202ENST00000439088 RPS12P25398 132 aaKnown RBP17.12■□□□□ 0.33
LINC00163-202ENST00000439088 RRP1BQ14684 758 aaKnown RBP17.12■□□□□ 0.33
LINC00163-202ENST00000439088 ZRSR1Q15695 479 aaKnown RBP17.12■□□□□ 0.33
LINC00163-202ENST00000439088 HS1BP3Q53T59 392 aa17.12■□□□□ 0.33
LINC00163-202ENST00000439088 ARL6IP4Q66PJ3 421 aaKnown RBP17.12■□□□□ 0.33
LINC00163-202ENST00000439088 KCTD1Q719H9 257 aa17.12■□□□□ 0.33
LINC00163-202ENST00000439088 C4orf32Q8N8J7 132 aa17.12■□□□□ 0.33
LINC00163-202ENST00000439088 VEZTQ9HBM0 779 aa17.12■□□□□ 0.33
LINC00163-202ENST00000439088 MYOZ2Q9NPC6 264 aa17.12■□□□□ 0.33
LINC00163-202ENST00000439088 HOOK1Q9UJC3 728 aaKnown RBP17.12■□□□□ 0.33
LINC00163-202ENST00000439088 SYNPO2Q9UMS6 1093 aa17.12■□□□□ 0.33
LINC00163-202ENST00000439088 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.11■□□□□ 0.33
LINC00163-202ENST00000439088 WNT10BO00744 389 aa17.11■□□□□ 0.33
LINC00163-202ENST00000439088 ADCY5O95622 1261 aa17.11■□□□□ 0.33
LINC00163-202ENST00000439088 SLC1A4P43007 532 aa17.11■□□□□ 0.33
LINC00163-202ENST00000439088 ZNF280AP59817 542 aaPredicted RBP17.11■□□□□ 0.33
LINC00163-202ENST00000439088 JAG1P78504 1218 aa17.11■□□□□ 0.33
LINC00163-202ENST00000439088 PPP1R18Q6NYC8 613 aa17.11■□□□□ 0.33
LINC00163-202ENST00000439088 NAT10Q9H0A0 1025 aaKnown RBP17.11■□□□□ 0.33
LINC00163-202ENST00000439088 TUBE1Q9UJT0 475 aa17.11■□□□□ 0.33
LINC00163-202ENST00000439088 F5H6K3 240 aa17.11■□□□□ 0.33
LINC00163-202ENST00000439088 POLR2DO15514 142 aaKnown RBP17.11■□□□□ 0.33
LINC00163-202ENST00000439088 MDM2Q00987 491 aaPredicted RBP17.11■□□□□ 0.33
LINC00163-202ENST00000439088 KLRC3Q07444 240 aa17.11■□□□□ 0.33
LINC00163-202ENST00000439088 IQCB1Q15051 598 aa17.11■□□□□ 0.33
LINC00163-202ENST00000439088 C11orf57Q6ZUT1 292 aaPredicted RBP17.11■□□□□ 0.33
LINC00163-202ENST00000439088 PSDA5PKW4 1024 aaPredicted RBP17.1■□□□□ 0.33
LINC00163-202ENST00000439088 ZBTB5O15062 677 aa17.1■□□□□ 0.33
LINC00163-202ENST00000439088 SLC16A2P36021 539 aa17.1■□□□□ 0.33
LINC00163-202ENST00000439088 NLRP12P59046 1061 aa17.1■□□□□ 0.33
LINC00163-202ENST00000439088 NONOQ15233 471 aaKnown RBP eCLIP17.1■□□□□ 0.33
LINC00163-202ENST00000439088 INF2Q27J81 1249 aa17.1■□□□□ 0.33
LINC00163-202ENST00000439088 KANK3Q6NY19 840 aa17.1■□□□□ 0.33
LINC00163-202ENST00000439088 USP49Q70CQ1 688 aa17.1■□□□□ 0.33
LINC00163-202ENST00000439088 CEP57L1Q8IYX8 460 aa17.1■□□□□ 0.33
LINC00163-202ENST00000439088 COA7Q96BR5 231 aa17.1■□□□□ 0.33
LINC00163-202ENST00000439088 GMCL1Q96IK5 515 aa17.1■□□□□ 0.33
LINC00163-202ENST00000439088 VWA3AA6NCI4 1184 aa17.09■□□□□ 0.33
LINC00163-202ENST00000439088 USP17L10C9JJH3 530 aa17.09■□□□□ 0.33
LINC00163-202ENST00000439088 NBPF9Q3BBW0 867 aa17.09■□□□□ 0.33
LINC00163-202ENST00000439088 EPSTI1Q96J88 318 aa17.09■□□□□ 0.33
LINC00163-202ENST00000439088 ADCY7P51828 1080 aa17.09■□□□□ 0.33
LINC00163-202ENST00000439088 REXO1Q8N1G1 1221 aaKnown RBP17.09■□□□□ 0.33
LINC00163-202ENST00000439088 SYMPKQ92797 1274 aaKnown RBP17.09■□□□□ 0.33
LINC00163-202ENST00000439088 TMEM39BQ9GZU3 492 aa17.09■□□□□ 0.33
LINC00163-202ENST00000439088 PGAP2Q9UHJ9 254 aa17.09■□□□□ 0.33
LINC00163-202ENST00000439088 SERTAD1Q9UHV2 236 aa17.09■□□□□ 0.33
LINC00163-202ENST00000439088 FZD9O00144 591 aa17.08■□□□□ 0.33
LINC00163-202ENST00000439088 LAD1O00515 517 aa17.08■□□□□ 0.33
LINC00163-202ENST00000439088 AP5Z1O43299 807 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms