RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 TMEM87BQ96K49 555 aa14.98□□□□□ -0.01
ACTN1-204ENST00000438964 STRBPQ96SI9 672 aaKnown RBP14.98□□□□□ -0.01
ACTN1-204ENST00000438964 UBAC1Q9BSL1 405 aa14.98□□□□□ -0.01
ACTN1-204ENST00000438964 GREM2Q9H772 168 aa14.98□□□□□ -0.01
ACTN1-204ENST00000438964 NHEJ1Q9H9Q4 299 aaPredicted RBP14.98□□□□□ -0.01
ACTN1-204ENST00000438964 SHOX2O60902 331 aaPredicted RBP14.98□□□□□ -0.01
ACTN1-204ENST00000438964 FANCBQ8NB91 859 aa14.98□□□□□ -0.01
ACTN1-204ENST00000438964 RASGRP4Q8TDF6 673 aa14.98□□□□□ -0.01
ACTN1-204ENST00000438964 TRIM47Q96LD4 638 aa14.98□□□□□ -0.01
ACTN1-204ENST00000438964 ZIM3Q96PE6 472 aa14.98□□□□□ -0.01
ACTN1-204ENST00000438964 FOXP1Q9H334 677 aaPredicted RBP14.98□□□□□ -0.01
ACTN1-204ENST00000438964 HAUS4Q9H6D7 363 aa14.98□□□□□ -0.01
ACTN1-204ENST00000438964 GPR108Q9NPR9 543 aa14.98□□□□□ -0.01
ACTN1-204ENST00000438964 PPANQ9NQ55 473 aaKnown RBP14.98□□□□□ -0.01
ACTN1-204ENST00000438964 LMO7Q8WWI1 1683 aa14.97□□□□□ -0.01
ACTN1-204ENST00000438964 ZNF263O14978 683 aa14.97□□□□□ -0.01
ACTN1-204ENST00000438964 NNTQ13423 1086 aa14.97□□□□□ -0.01
ACTN1-204ENST00000438964 E2F5Q15329 346 aa14.97□□□□□ -0.01
ACTN1-204ENST00000438964 GBP6Q6ZN66 633 aa14.97□□□□□ -0.01
ACTN1-204ENST00000438964 ZNF654Q8IZM8 581 aa14.97□□□□□ -0.01
ACTN1-204ENST00000438964 FAM184BQ9ULE4 1060 aa14.97□□□□□ -0.01
ACTN1-204ENST00000438964 NFU1Q9UMS0 254 aa14.97□□□□□ -0.01
ACTN1-204ENST00000438964 KRT86O43790 486 aa14.97□□□□□ -0.01
ACTN1-204ENST00000438964 DEXIO95424 95 aa14.97□□□□□ -0.01
ACTN1-204ENST00000438964 ATP6V1AP38606 617 aa14.97□□□□□ -0.01
ACTN1-204ENST00000438964 HDLBPQ00341 1268 aaKnown RBP14.97□□□□□ -0.01
ACTN1-204ENST00000438964 TUBB2AQ13885 445 aa14.97□□□□□ -0.01
ACTN1-204ENST00000438964 LCORLQ8N3X6 602 aa14.97□□□□□ -0.01
ACTN1-204ENST00000438964 MB21D1Q8N884 522 aa14.97□□□□□ -0.01
ACTN1-204ENST00000438964 AENQ8WTP8 325 aaKnown RBP14.97□□□□□ -0.01
ACTN1-204ENST00000438964 CCDC51Q96ER9 411 aa14.97□□□□□ -0.01
ACTN1-204ENST00000438964 CCDC43Q96MW1 224 aaKnown RBP14.97□□□□□ -0.01
ACTN1-204ENST00000438964 GSDMAQ96QA5 445 aa14.97□□□□□ -0.01
ACTN1-204ENST00000438964 TUBB2BQ9BVA1 445 aa14.97□□□□□ -0.01
ACTN1-204ENST00000438964 LIMA1Q9UHB6 759 aaKnown RBP14.97□□□□□ -0.01
ACTN1-204ENST00000438964 UBR1Q8IWV7 1749 aa14.97□□□□□ -0.01
ACTN1-204ENST00000438964 IPO7O95373 1038 aaKnown RBP14.96□□□□□ -0.01
ACTN1-204ENST00000438964 IL17AQ16552 155 aa14.96□□□□□ -0.01
ACTN1-204ENST00000438964 PACSIN2Q9UNF0 486 aaPredicted RBP14.96□□□□□ -0.01
ACTN1-204ENST00000438964 CEP131Q9UPN4 1083 aa14.96□□□□□ -0.01
ACTN1-204ENST00000438964 ECM29Q5VYK3 1845 aa14.96□□□□□ -0.01
ACTN1-204ENST00000438964 MST1RQ04912 1400 aa14.96□□□□□ -0.01
ACTN1-204ENST00000438964 KAT6BQ8WYB5 2073 aa14.96□□□□□ -0.01
ACTN1-204ENST00000438964 ERICH2A1L162 156 aa14.96□□□□□ -0.01
ACTN1-204ENST00000438964 CCDC172P0C7W6 258 aa14.96□□□□□ -0.01
ACTN1-204ENST00000438964 SPRED3Q2MJR0 410 aa14.96□□□□□ -0.01
ACTN1-204ENST00000438964 SGMS1Q86VZ5 419 aa14.96□□□□□ -0.01
ACTN1-204ENST00000438964 IFNL2Q8IZJ0 200 aa14.96□□□□□ -0.01
ACTN1-204ENST00000438964 CEP89Q96ST8 783 aa14.96□□□□□ -0.01
ACTN1-204ENST00000438964 AATFQ9NY61 560 aaKnown RBP eCLIP14.96□□□□□ -0.01
ACTN1-204ENST00000438964 MYO1AQ9UBC5 1043 aa14.96□□□□□ -0.01
ACTN1-204ENST00000438964 NFAT5O94916 1531 aa14.96□□□□□ -0.02
ACTN1-204ENST00000438964 PDHBP11177 359 aa14.95□□□□□ -0.02
ACTN1-204ENST00000438964 CARSP49589 748 aaKnown RBP14.95□□□□□ -0.02
ACTN1-204ENST00000438964 AKNAD1Q5T1N1 836 aa14.95□□□□□ -0.02
ACTN1-204ENST00000438964 CCDC181Q5TID7 509 aa14.95□□□□□ -0.02
ACTN1-204ENST00000438964 PAPD7Q5XG87 772 aaKnown RBP14.95□□□□□ -0.02
ACTN1-204ENST00000438964 SH3RF1Q7Z6J0 888 aa14.95□□□□□ -0.02
ACTN1-204ENST00000438964 CREG2Q8IUH2 290 aa14.95□□□□□ -0.02
ACTN1-204ENST00000438964 MSL3Q8N5Y2 521 aaKnown RBP14.95□□□□□ -0.02
ACTN1-204ENST00000438964 OR2W6PQ8NHA6 318 aa14.95□□□□□ -0.02
ACTN1-204ENST00000438964 WASF1Q92558 559 aa14.95□□□□□ -0.02
ACTN1-204ENST00000438964 FAM207AQ9NSI2 230 aaPredicted RBP14.95□□□□□ -0.02
ACTN1-204ENST00000438964 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.95□□□□□ -0.02
ACTN1-204ENST00000438964 RPN1P04843 607 aaKnown RBP14.95□□□□□ -0.02
ACTN1-204ENST00000438964 ITGA6P23229 1130 aa14.95□□□□□ -0.02
ACTN1-204ENST00000438964 TTC38Q5R3I4 469 aa14.95□□□□□ -0.02
ACTN1-204ENST00000438964 SPATA4Q8NEY3 305 aa14.95□□□□□ -0.02
ACTN1-204ENST00000438964 RBM12Q9NTZ6 932 aaKnown RBP14.95□□□□□ -0.02
ACTN1-204ENST00000438964 CHADLQ6NUI6 762 aa14.95□□□□□ -0.02
ACTN1-204ENST00000438964 SCLT1Q96NL6 688 aa14.95□□□□□ -0.02
ACTN1-204ENST00000438964 NMT2O60551 498 aa14.94□□□□□ -0.02
ACTN1-204ENST00000438964 HSF2BPO75031 334 aa14.94□□□□□ -0.02
ACTN1-204ENST00000438964 KRT2P35908 639 aa14.94□□□□□ -0.02
ACTN1-204ENST00000438964 CKAP4Q07065 602 aaKnown RBP14.94□□□□□ -0.02
ACTN1-204ENST00000438964 HLFQ16534 295 aa14.94□□□□□ -0.02
ACTN1-204ENST00000438964 DNAAF5Q86Y56 855 aa14.94□□□□□ -0.02
ACTN1-204ENST00000438964 ZNF579Q8NAF0 562 aaKnown RBP14.94□□□□□ -0.02
ACTN1-204ENST00000438964 CABS1Q96KC9 395 aa14.94□□□□□ -0.02
ACTN1-204ENST00000438964 BCCIPQ9P287 314 aaKnown RBP eCLIP14.94□□□□□ -0.02
ACTN1-204ENST00000438964 SALL4Q9UJQ4 1053 aa14.94□□□□□ -0.02
ACTN1-204ENST00000438964 TBC1D2BQ9UPU7 963 aa14.94□□□□□ -0.02
ACTN1-204ENST00000438964 ITIH6Q6UXX5 1313 aa14.94□□□□□ -0.02
ACTN1-204ENST00000438964 GOLGB1Q14789 3259 aaKnown RBP14.94□□□□□ -0.02
ACTN1-204ENST00000438964 E7EVH7 732 aa14.94□□□□□ -0.02
ACTN1-204ENST00000438964 EPHB6O15197 1021 aa14.94□□□□□ -0.02
ACTN1-204ENST00000438964 GLI1P08151 1106 aa14.94□□□□□ -0.02
ACTN1-204ENST00000438964 TBC1D8BQ0IIM8 1120 aa14.94□□□□□ -0.02
ACTN1-204ENST00000438964 KIF5AQ12840 1032 aa14.94□□□□□ -0.02
ACTN1-204ENST00000438964 SWT1Q5T5J6 900 aaKnown RBP14.94□□□□□ -0.02
ACTN1-204ENST00000438964 C2CD5Q86YS7 1000 aa14.94□□□□□ -0.02
ACTN1-204ENST00000438964 SLC24A3Q9HC58 644 aa14.94□□□□□ -0.02
ACTN1-204ENST00000438964 RWDD2AQ9UIY3 292 aa14.94□□□□□ -0.02
ACTN1-204ENST00000438964 SPATA31A3Q5VYP0 1347 aa14.93□□□□□ -0.02
ACTN1-204ENST00000438964 RASSF10A6NK89 507 aa14.93□□□□□ -0.02
ACTN1-204ENST00000438964 GSG1L2A8MUP6 293 aa14.93□□□□□ -0.02
ACTN1-204ENST00000438964 SKAP2O75563 359 aaPredicted RBP14.93□□□□□ -0.02
ACTN1-204ENST00000438964 GSCP56915 257 aaPredicted RBP14.93□□□□□ -0.02
ACTN1-204ENST00000438964 SF3B2Q13435 895 aaKnown RBP14.93□□□□□ -0.02
ACTN1-204ENST00000438964 NAA35Q5VZE5 725 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms