RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 RPSAP08865 295 aaKnown RBP20.21■□□□□ 0.83
KCNC4-204ENST00000438661 PAK1Q13153 545 aa20.21■□□□□ 0.83
KCNC4-204ENST00000438661 ZNF174Q15697 407 aa20.21■□□□□ 0.83
KCNC4-204ENST00000438661 CCDC96Q2M329 555 aa20.21■□□□□ 0.83
KCNC4-204ENST00000438661 CCDC181Q5TID7 509 aa20.21■□□□□ 0.83
KCNC4-204ENST00000438661 MICALCLQ6ZW33 695 aa20.21■□□□□ 0.83
KCNC4-204ENST00000438661 KRT26Q7Z3Y9 468 aa20.21■□□□□ 0.83
KCNC4-204ENST00000438661 IGDCC4Q8TDY8 1250 aa20.21■□□□□ 0.83
KCNC4-204ENST00000438661 CCDC43Q96MW1 224 aaKnown RBP20.21■□□□□ 0.83
KCNC4-204ENST00000438661 GSDMAQ96QA5 445 aa20.21■□□□□ 0.83
KCNC4-204ENST00000438661 LY9Q9HBG7 655 aa20.21■□□□□ 0.83
KCNC4-204ENST00000438661 LIMA1Q9UHB6 759 aaKnown RBP20.21■□□□□ 0.83
KCNC4-204ENST00000438661 GDAQ9Y2T3 454 aa20.21■□□□□ 0.83
KCNC4-204ENST00000438661 CCDC189A1A4V9 331 aa20.2■□□□□ 0.82
KCNC4-204ENST00000438661 GUCY2FP51841 1108 aa20.2■□□□□ 0.82
KCNC4-204ENST00000438661 KRT83P78385 493 aa20.2■□□□□ 0.82
KCNC4-204ENST00000438661 DDR1Q08345 913 aa20.2■□□□□ 0.82
KCNC4-204ENST00000438661 LRCH2Q5VUJ6 765 aa20.2■□□□□ 0.82
KCNC4-204ENST00000438661 ZNF473Q8WTR7 871 aaKnown RBP20.2■□□□□ 0.82
KCNC4-204ENST00000438661 MCM8Q9UJA3 840 aa20.2■□□□□ 0.82
KCNC4-204ENST00000438661 CEP131Q9UPN4 1083 aa20.2■□□□□ 0.82
KCNC4-204ENST00000438661 C1orf167Q5SNV9 1468 aa20.2■□□□□ 0.82
KCNC4-204ENST00000438661 CCDC57Q2TAC2 916 aa20.2■□□□□ 0.82
KCNC4-204ENST00000438661 BACH1O14867 736 aa20.19■□□□□ 0.82
KCNC4-204ENST00000438661 TRIM21P19474 475 aaKnown RBP20.19■□□□□ 0.82
KCNC4-204ENST00000438661 CCT8L2Q96SF2 557 aa20.19■□□□□ 0.82
KCNC4-204ENST00000438661 SLC40A1Q9NP59 571 aa20.19■□□□□ 0.82
KCNC4-204ENST00000438661 ZSWIM5Q9P217 1185 aa20.19■□□□□ 0.82
KCNC4-204ENST00000438661 TRIM75PA6NK02 468 aa20.19■□□□□ 0.82
KCNC4-204ENST00000438661 SEMA3EO15041 775 aa20.19■□□□□ 0.82
KCNC4-204ENST00000438661 FMNL1O95466 1100 aaPredicted RBP20.19■□□□□ 0.82
KCNC4-204ENST00000438661 ZFYP08048 801 aaPredicted RBP20.19■□□□□ 0.82
KCNC4-204ENST00000438661 KLK7P49862 253 aa20.19■□□□□ 0.82
KCNC4-204ENST00000438661 TRIM14Q14142 442 aa20.19■□□□□ 0.82
KCNC4-204ENST00000438661 NFRKBQ6P4R8 1299 aa20.19■□□□□ 0.82
KCNC4-204ENST00000438661 ZNF579Q8NAF0 562 aaKnown RBP20.19■□□□□ 0.82
KCNC4-204ENST00000438661 SPATA4Q8NEY3 305 aa20.19■□□□□ 0.82
KCNC4-204ENST00000438661 CIAO1O76071 339 aa20.19■□□□□ 0.82
KCNC4-204ENST00000438661 SATB1Q01826 763 aa20.19■□□□□ 0.82
KCNC4-204ENST00000438661 KIF5AQ12840 1032 aa20.19■□□□□ 0.82
KCNC4-204ENST00000438661 SF3A3Q12874 501 aaKnown RBP eCLIP20.19■□□□□ 0.82
KCNC4-204ENST00000438661 EHBP1Q8NDI1 1231 aa20.19■□□□□ 0.82
KCNC4-204ENST00000438661 EPN3Q9H201 632 aa20.19■□□□□ 0.82
KCNC4-204ENST00000438661 LRWD1Q9UFC0 647 aa20.19■□□□□ 0.82
KCNC4-204ENST00000438661 ZSCAN5CA6NGD5 496 aaPredicted RBP20.18■□□□□ 0.82
KCNC4-204ENST00000438661 SKAP2O75563 359 aaPredicted RBP20.18■□□□□ 0.82
KCNC4-204ENST00000438661 EARS2Q5JPH6 523 aaKnown RBP20.18■□□□□ 0.82
KCNC4-204ENST00000438661 CREG2Q8IUH2 290 aa20.18■□□□□ 0.82
KCNC4-204ENST00000438661 WASF1Q92558 559 aa20.18■□□□□ 0.82
KCNC4-204ENST00000438661 CARD10Q9BWT7 1032 aa20.18■□□□□ 0.82
KCNC4-204ENST00000438661 NHEJ1Q9H9Q4 299 aaPredicted RBP20.18■□□□□ 0.82
KCNC4-204ENST00000438661 MLXIPQ9HAP2 919 aa20.18■□□□□ 0.82
KCNC4-204ENST00000438661 WNT7AO00755 349 aa20.18■□□□□ 0.82
KCNC4-204ENST00000438661 EPHB4P54760 987 aa20.18■□□□□ 0.82
KCNC4-204ENST00000438661 CFAP58Q5T655 872 aa20.18■□□□□ 0.82
KCNC4-204ENST00000438661 ANKRD13CQ8N6S4 541 aa20.18■□□□□ 0.82
KCNC4-204ENST00000438661 ZNHIT6Q9NWK9 470 aaKnown RBP20.18■□□□□ 0.82
KCNC4-204ENST00000438661 PRDM1O75626 825 aa20.17■□□□□ 0.82
KCNC4-204ENST00000438661 PARP1P09874 1014 aaKnown RBP20.17■□□□□ 0.82
KCNC4-204ENST00000438661 CLNS1AP54105 237 aaKnown RBP20.17■□□□□ 0.82
KCNC4-204ENST00000438661 SKOR1P84550 965 aa20.17■□□□□ 0.82
KCNC4-204ENST00000438661 KCTD19Q17RG1 926 aaPredicted RBP20.17■□□□□ 0.82
KCNC4-204ENST00000438661 FOXP1Q9H334 677 aaPredicted RBP20.17■□□□□ 0.82
KCNC4-204ENST00000438661 NFU1Q9UMS0 254 aa20.17■□□□□ 0.82
KCNC4-204ENST00000438661 NWD2Q9ULI1 1742 aa20.17■□□□□ 0.82
KCNC4-204ENST00000438661 NCK2O43639 380 aa20.17■□□□□ 0.82
KCNC4-204ENST00000438661 FAM153BP0C7A2 387 aa20.17■□□□□ 0.82
KCNC4-204ENST00000438661 CYLC1P35663 651 aaPredicted RBP20.17■□□□□ 0.82
KCNC4-204ENST00000438661 SPAG1Q07617 926 aa20.17■□□□□ 0.82
KCNC4-204ENST00000438661 FAM153CQ494X1 144 aa20.17■□□□□ 0.82
KCNC4-204ENST00000438661 PREPLQ4J6C6 727 aaPredicted RBP20.17■□□□□ 0.82
KCNC4-204ENST00000438661 MB21D1Q8N884 522 aa20.17■□□□□ 0.82
KCNC4-204ENST00000438661 FAM89AQ96GI7 184 aa20.17■□□□□ 0.82
KCNC4-204ENST00000438661 VCPKMTQ9H867 229 aa20.17■□□□□ 0.82
KCNC4-204ENST00000438661 FAM153AQ9UHL3 310 aa20.17■□□□□ 0.82
KCNC4-204ENST00000438661 GOLGA6L7A0A1B0GV03 622 aa20.16■□□□□ 0.82
KCNC4-204ENST00000438661 LRRC10BA6NIK2 292 aa20.16■□□□□ 0.82
KCNC4-204ENST00000438661 PPP1R12BO60237 982 aaPredicted RBP20.16■□□□□ 0.82
KCNC4-204ENST00000438661 MOCS3O95396 460 aa20.16■□□□□ 0.82
KCNC4-204ENST00000438661 RTN1Q16799 776 aa20.16■□□□□ 0.82
KCNC4-204ENST00000438661 NLRP14Q86W24 1093 aa20.16■□□□□ 0.82
KCNC4-204ENST00000438661 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.16■□□□□ 0.82
KCNC4-204ENST00000438661 A1CFQ9NQ94 594 aaKnown RBP20.16■□□□□ 0.82
KCNC4-204ENST00000438661 STIM2Q9P246 746 aa20.16■□□□□ 0.82
KCNC4-204ENST00000438661 DDX20Q9UHI6 824 aaKnown RBP20.16■□□□□ 0.82
KCNC4-204ENST00000438661 CAPN6Q9Y6Q1 641 aa20.16■□□□□ 0.82
KCNC4-204ENST00000438661 B4DLN1 442 aa20.16■□□□□ 0.82
KCNC4-204ENST00000438661 NR1D1P20393 614 aa20.16■□□□□ 0.82
KCNC4-204ENST00000438661 PDE6BP35913 854 aa20.16■□□□□ 0.82
KCNC4-204ENST00000438661 RNASE9P60153 205 aaKnown RBP20.16■□□□□ 0.82
KCNC4-204ENST00000438661 CCDC121Q6ZUS5 278 aa20.16■□□□□ 0.82
KCNC4-204ENST00000438661 TICAM2Q86XR7 235 aa20.16■□□□□ 0.82
KCNC4-204ENST00000438661 STAG1Q8WVM7 1258 aa20.16■□□□□ 0.82
KCNC4-204ENST00000438661 SMTNP53814 917 aa20.16■□□□□ 0.82
KCNC4-204ENST00000438661 NAA25Q14CX7 972 aa20.16■□□□□ 0.82
KCNC4-204ENST00000438661 NAIF1Q69YI7 327 aaPredicted RBP20.16■□□□□ 0.82
KCNC4-204ENST00000438661 C8orf74Q6P047 294 aa20.16■□□□□ 0.82
KCNC4-204ENST00000438661 MAATS1Q7Z4T9 603 aa20.16■□□□□ 0.82
KCNC4-204ENST00000438661 MYCBPAPQ8TBZ2 947 aa20.16■□□□□ 0.82
KCNC4-204ENST00000438661 TMEM87BQ96K49 555 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms