RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 BOLA2Q9H3K6 86 aa9.33□□□□□ -0.92
VPS50-204ENST00000438395 DCP1AQ9NPI6 582 aaPredicted RBP9.33□□□□□ -0.92
VPS50-204ENST00000438395 ATP8A2Q9NTI2 1148 aa9.33□□□□□ -0.92
VPS50-204ENST00000438395 ZBTB40Q9NUA8 1239 aa9.33□□□□□ -0.92
VPS50-204ENST00000438395 PRKAG2Q9UGJ0 569 aa9.33□□□□□ -0.92
VPS50-204ENST00000438395 RCAN3Q9UKA8 241 aa9.33□□□□□ -0.92
VPS50-204ENST00000438395 ADGRG1Q9Y653 693 aa9.33□□□□□ -0.92
VPS50-204ENST00000438395 SIPA1L1O43166 1804 aa9.33□□□□□ -0.92
VPS50-204ENST00000438395 CUL9Q8IWT3 2517 aa9.32□□□□□ -0.92
VPS50-204ENST00000438395 STRNO43815 780 aa9.32□□□□□ -0.92
VPS50-204ENST00000438395 CYP2D6P10635 497 aa9.32□□□□□ -0.92
VPS50-204ENST00000438395 ATP5JP18859 108 aa9.32□□□□□ -0.92
VPS50-204ENST00000438395 GABPAQ06546 454 aa9.32□□□□□ -0.92
VPS50-204ENST00000438395 GRB14Q14449 540 aa9.32□□□□□ -0.92
VPS50-204ENST00000438395 NCAPG2Q86XI2 1143 aa9.32□□□□□ -0.92
VPS50-204ENST00000438395 SLC44A5Q8NCS7 719 aa9.32□□□□□ -0.92
VPS50-204ENST00000438395 LBHD1Q9BQE6 289 aaPredicted RBP9.32□□□□□ -0.92
VPS50-204ENST00000438395 UBE2OQ9C0C9 1292 aaKnown RBP9.32□□□□□ -0.92
VPS50-204ENST00000438395 PRO3102Q9H379 93 aa9.32□□□□□ -0.92
VPS50-204ENST00000438395 BTBD7Q9P203 1132 aa9.32□□□□□ -0.92
VPS50-204ENST00000438395 TCRBV5S4A2TA0A5A2 114 aa9.31□□□□□ -0.92
VPS50-204ENST00000438395 KBTBD13C9JR72 458 aa9.31□□□□□ -0.92
VPS50-204ENST00000438395 WDR46O15213 610 aaKnown RBP9.31□□□□□ -0.92
VPS50-204ENST00000438395 CNMDO75829 334 aa9.31□□□□□ -0.92
VPS50-204ENST00000438395 HOXC6P09630 235 aa9.31□□□□□ -0.92
VPS50-204ENST00000438395 FECHP22830 423 aa9.31□□□□□ -0.92
VPS50-204ENST00000438395 ADORA2AP29274 412 aa9.31□□□□□ -0.92
VPS50-204ENST00000438395 CYP2C19P33261 490 aa9.31□□□□□ -0.92
VPS50-204ENST00000438395 ADD2P35612 726 aa9.31□□□□□ -0.92
VPS50-204ENST00000438395 MAGEA10P43363 369 aaPredicted RBP9.31□□□□□ -0.92
VPS50-204ENST00000438395 LRRFIP1Q32MZ4 808 aaKnown RBP9.31□□□□□ -0.92
VPS50-204ENST00000438395 TJAP1Q5JTD0 557 aa9.31□□□□□ -0.92
VPS50-204ENST00000438395 SPICE1Q8N0Z3 855 aa9.31□□□□□ -0.92
VPS50-204ENST00000438395 SHCBP1Q8NEM2 672 aa9.31□□□□□ -0.92
VPS50-204ENST00000438395 DYNLL2Q96FJ2 89 aa9.31□□□□□ -0.92
VPS50-204ENST00000438395 MTRQ99707 1265 aa9.31□□□□□ -0.92
VPS50-204ENST00000438395 HAUS7Q99871 368 aa9.31□□□□□ -0.92
VPS50-204ENST00000438395 GDF15Q99988 308 aa9.31□□□□□ -0.92
VPS50-204ENST00000438395 MOV10L1Q9BXT6 1211 aaKnown RBP9.31□□□□□ -0.92
VPS50-204ENST00000438395 SPATC1LQ9H0A9 340 aa9.31□□□□□ -0.92
VPS50-204ENST00000438395 MROH8Q9H579 483 aa9.31□□□□□ -0.92
VPS50-204ENST00000438395 GOPCQ9HD26 462 aa9.31□□□□□ -0.92
VPS50-204ENST00000438395 DDX20Q9UHI6 824 aaKnown RBP9.31□□□□□ -0.92
VPS50-204ENST00000438395 CTDP1Q9Y5B0 961 aaPredicted RBP9.31□□□□□ -0.92
VPS50-204ENST00000438395 SLC4A4Q9Y6R1 1079 aa9.31□□□□□ -0.92
VPS50-204ENST00000438395 FOCADQ5VW36 1801 aa9.31□□□□□ -0.92
VPS50-204ENST00000438395 PFASO15067 1338 aa9.31□□□□□ -0.92
VPS50-204ENST00000438395 USP17L12C9JPN9 530 aa9.3□□□□□ -0.92
VPS50-204ENST00000438395 USP17L21D6R901 530 aa9.3□□□□□ -0.92
VPS50-204ENST00000438395 DNM1LO00429 736 aa9.3□□□□□ -0.92
VPS50-204ENST00000438395 PRKAB2O43741 272 aa9.3□□□□□ -0.92
VPS50-204ENST00000438395 FCER1AP12319 257 aa9.3□□□□□ -0.92
VPS50-204ENST00000438395 AKR1B1P15121 316 aa9.3□□□□□ -0.92
VPS50-204ENST00000438395 ERCC3P19447 782 aa9.3□□□□□ -0.92
VPS50-204ENST00000438395 GUCY1A2P33402 732 aa9.3□□□□□ -0.92
VPS50-204ENST00000438395 BMP8BP34820 402 aa9.3□□□□□ -0.92
VPS50-204ENST00000438395 UBE3CQ15386 1083 aa9.3□□□□□ -0.92
VPS50-204ENST00000438395 OLFML2BQ68BL8 750 aa9.3□□□□□ -0.92
VPS50-204ENST00000438395 CLEC10AQ8IUN9 316 aa9.3□□□□□ -0.92
VPS50-204ENST00000438395 TDHQ8IZJ6 230 aa9.3□□□□□ -0.92
VPS50-204ENST00000438395 ARRDC4Q8NCT1 418 aa9.3□□□□□ -0.92
VPS50-204ENST00000438395 ZNF516Q92618 1163 aa9.3□□□□□ -0.92
VPS50-204ENST00000438395 SENP6Q9GZR1 1112 aaPredicted RBP9.3□□□□□ -0.92
VPS50-204ENST00000438395 VCPKMTQ9H867 229 aa9.3□□□□□ -0.92
VPS50-204ENST00000438395 KANSL2Q9H9L4 492 aa9.3□□□□□ -0.92
VPS50-204ENST00000438395 ZNF287Q9HBT7 754 aa9.3□□□□□ -0.92
VPS50-204ENST00000438395 ARPP21Q9UBL0 812 aaPredicted RBP9.3□□□□□ -0.92
VPS50-204ENST00000438395 TMX2Q9Y320 296 aa9.3□□□□□ -0.92
VPS50-204ENST00000438395 NAV1Q8NEY1 1877 aa9.3□□□□□ -0.92
VPS50-204ENST00000438395 DOCK3Q8IZD9 2030 aa9.29□□□□□ -0.92
VPS50-204ENST00000438395 MYH1P12882 1939 aa9.29□□□□□ -0.92
VPS50-204ENST00000438395 CYP2D7A0A087X1C5 515 aa9.29□□□□□ -0.92
VPS50-204ENST00000438395 A0A1W2PRG0 241 aa9.29□□□□□ -0.92
VPS50-204ENST00000438395 SLC25A27O95847 323 aa9.29□□□□□ -0.92
VPS50-204ENST00000438395 COL6A1P12109 1028 aa9.29□□□□□ -0.92
VPS50-204ENST00000438395 COPB2P35606 906 aa9.29□□□□□ -0.92
VPS50-204ENST00000438395 CDK8P49336 464 aa9.29□□□□□ -0.92
VPS50-204ENST00000438395 KCTD2Q14681 263 aa9.29□□□□□ -0.92
VPS50-204ENST00000438395 LRRC26Q2I0M4 334 aa9.29□□□□□ -0.92
VPS50-204ENST00000438395 C12orf60Q5U649 245 aa9.29□□□□□ -0.92
VPS50-204ENST00000438395 C16orf86Q6ZW13 317 aa9.29□□□□□ -0.92
VPS50-204ENST00000438395 SIRT2Q8IXJ6 389 aa9.29□□□□□ -0.92
VPS50-204ENST00000438395 ABRAQ8N0Z2 381 aa9.29□□□□□ -0.92
VPS50-204ENST00000438395 ATG4CQ96DT6 458 aa9.29□□□□□ -0.92
VPS50-204ENST00000438395 MKNK2Q9HBH9 465 aa9.29□□□□□ -0.92
VPS50-204ENST00000438395 ECHDC1Q9NTX5 307 aa9.29□□□□□ -0.92
VPS50-204ENST00000438395 FLRT1Q9NZU1 646 aa9.29□□□□□ -0.92
VPS50-204ENST00000438395 ISY1Q9ULR0 285 aaKnown RBP9.29□□□□□ -0.92
VPS50-204ENST00000438395 DDX60LQ5H9U9 1706 aaKnown RBP9.28□□□□□ -0.92
VPS50-204ENST00000438395 CDK5RAP2Q96SN8 1893 aa9.28□□□□□ -0.92
VPS50-204ENST00000438395 RCCD1A6NED2 376 aa9.28□□□□□ -0.92
VPS50-204ENST00000438395 SOX1O00570 391 aaPredicted RBP9.28□□□□□ -0.92
VPS50-204ENST00000438395 SEPT4O43236 478 aa9.28□□□□□ -0.92
VPS50-204ENST00000438395 APPP05067 770 aa9.28□□□□□ -0.92
VPS50-204ENST00000438395 CYBAP13498 195 aa9.28□□□□□ -0.92
VPS50-204ENST00000438395 TDO2P48775 406 aa9.28□□□□□ -0.92
VPS50-204ENST00000438395 MDM2Q00987 491 aaPredicted RBP9.28□□□□□ -0.92
VPS50-204ENST00000438395 DEFB123Q8N688 67 aa9.28□□□□□ -0.92
VPS50-204ENST00000438395 SLC17A8Q8NDX2 589 aa9.28□□□□□ -0.92
VPS50-204ENST00000438395 NPLOC4Q8TAT6 608 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms