RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 CDCA7Q9BWT1 371 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-205ENST00000438362 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.44□□□□□ -1.22
CSDE1-205ENST00000438362 SMCO2A6NFE2 343 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 ATP2C2O75185 946 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 TADA3O75528 432 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 OR52Z1P0C646 297 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 TCP1P17987 556 aaKnown RBP7.44□□□□□ -1.22
CSDE1-205ENST00000438362 RPL13P26373 211 aaKnown RBP7.44□□□□□ -1.22
CSDE1-205ENST00000438362 ACTN2P35609 894 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 GALNT17Q6IS24 598 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 METTL16Q86W50 562 aaKnown RBP7.44□□□□□ -1.22
CSDE1-205ENST00000438362 CCDC155Q8N6L0 562 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 RGS22Q8NE09 1264 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 NGLY1Q96IV0 654 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 NUCKS1Q9H1E3 243 aaKnown RBP7.44□□□□□ -1.22
CSDE1-205ENST00000438362 EHMT1Q9H9B1 1298 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 NLRC4Q9NPP4 1024 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 TUBE1Q9UJT0 475 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.44□□□□□ -1.22
CSDE1-205ENST00000438362 SOS2Q07890 1332 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-205ENST00000438362 FOXN1O15353 648 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 POTEJP0CG39 1038 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 HNRNPH2P55795 449 aaKnown RBP7.44□□□□□ -1.22
CSDE1-205ENST00000438362 TRIM28Q13263 835 aaKnown RBP7.44□□□□□ -1.22
CSDE1-205ENST00000438362 KRT31Q15323 416 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 HERC4Q5GLZ8 1057 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-205ENST00000438362 CCDC121Q6ZUS5 278 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 NAP1L4Q99733 375 aaKnown RBP7.44□□□□□ -1.22
CSDE1-205ENST00000438362 RABEP2Q9H5N1 569 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 GPCPD1Q9NPB8 672 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 ATP8A2Q9NTI2 1148 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 FAN1Q9Y2M0 1017 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 RTCBQ9Y3I0 505 aaKnown RBP7.44□□□□□ -1.22
CSDE1-205ENST00000438362 HYOU1Q9Y4L1 999 aa7.44□□□□□ -1.22
CSDE1-205ENST00000438362 SPDYE3A6NKU9 549 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 B4DLN1 442 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 ERVV-1B6SEH8 477 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 NDUFA10O95299 355 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 CDC25AP30304 524 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 HLFQ16534 295 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 DCAF17Q5H9S7 520 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-205ENST00000438362 HS2ST1Q7LGA3 356 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 MAPKAPK5Q8IW41 473 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 SYNE4Q8N205 404 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 RETREG2Q8NC44 543 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 MTA3Q9BTC8 594 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 RASAL2Q9UJF2 1139 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 A0A0G2JLW4 131 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 KLRF2D3W0D1 207 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 PRR29P0C7W0 189 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 INPP5BP32019 993 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 ADCY7P51828 1080 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 DYNLL1P63167 89 aaKnown RBP7.43□□□□□ -1.22
CSDE1-205ENST00000438362 ST5P78524 1137 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 KLHL30Q0D2K2 578 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 ASIC2Q16515 512 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 SFMBT2Q5VUG0 894 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 CERS3Q8IU89 383 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 GPATCH11Q8N954 259 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 TGFBRAP1Q8WUH2 860 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 CTNNBL1Q8WYA6 563 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-205ENST00000438362 PIGBQ92521 554 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 DHTKD1Q96HY7 919 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-205ENST00000438362 CNOT6LQ96LI5 555 aaKnown RBP7.43□□□□□ -1.22
CSDE1-205ENST00000438362 FAM204AQ9H8W3 233 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 MAGEF1Q9HAY2 307 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 CPDO75976 1380 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 KRT13P13646 458 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 CASP1P29466 404 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 TECP42680 631 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 ANTXR2P58335 489 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 CASP8Q14790 479 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 CPLX4Q7Z7G2 160 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 NEK8Q86SG6 692 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 CCDC26Q8TAB7 109 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 WDR24Q96S15 920 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 PLVAPQ9BX97 442 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 EPC1Q9H2F5 836 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 CUEDC2Q9H467 287 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 ABCB6Q9NP58 842 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 ADGRG1Q9Y653 693 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 SPATA31D1Q6ZQQ2 1576 aa7.43□□□□□ -1.22
CSDE1-205ENST00000438362 SNAP23O00161 211 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 HPDP32754 393 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-205ENST00000438362 RCAN1P53805 252 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 TRAF1Q13077 416 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 DIP2AQ14689 1571 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 RASGRP4Q8TDF6 673 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 OXER1Q8TDS5 423 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 UBLCP1Q8WVY7 318 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-205ENST00000438362 LRRC45Q96CN5 670 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 DNAJC5Q9H3Z4 198 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 ADAM21Q9UKJ8 722 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 ZBTB12Q9Y330 459 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-205ENST00000438362 CDHR2Q9BYE9 1310 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 CYP2D7A0A087X1C5 515 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 TLDC2A0PJX2 215 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 TEX33O43247 280 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 FAM13AO94988 1023 aa7.42□□□□□ -1.22
CSDE1-205ENST00000438362 PLEKHA8P1O95397 391 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms