RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 PARD3BQ8TEW8 1205 aa11.4□□□□□ -0.59
SHPRH-206ENST00000438092 CACYBPQ9HB71 228 aaKnown RBP11.4□□□□□ -0.59
SHPRH-206ENST00000438092 PPP1R12AO14974 1030 aaPredicted RBP11.39□□□□□ -0.59
SHPRH-206ENST00000438092 BUB1BO60566 1050 aaPredicted RBP11.39□□□□□ -0.59
SHPRH-206ENST00000438092 ADD1P35611 737 aaKnown RBP11.39□□□□□ -0.59
SHPRH-206ENST00000438092 PLCB4Q15147 1175 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 POMGNT1Q8WZA1 660 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 INTS4Q96HW7 963 aaKnown RBP11.39□□□□□ -0.59
SHPRH-206ENST00000438092 CSRNP1Q96S65 589 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 SGSM2O43147 1006 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 ATP2B4P23634 1241 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 CRKLP46109 303 aaKnown RBP11.39□□□□□ -0.59
SHPRH-206ENST00000438092 DCAF15Q66K64 600 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 TTBK2Q6IQ55 1244 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 PALM2Q8IXS6 379 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 CLIC6Q96NY7 704 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 LZTS2Q9BRK4 669 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 IRAK4Q9NWZ3 460 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 A0A0D9SFI3 127 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 MARK3P27448 753 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 OSTNP61366 133 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 DMP1Q13316 513 aaPredicted RBP11.39□□□□□ -0.59
SHPRH-206ENST00000438092 RPS6KA1Q15418 735 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 SH2D4BQ5SQS7 431 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 FAM196AQ6ZSG2 479 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 RNASELQ05823 741 aaKnown RBP11.39□□□□□ -0.59
SHPRH-206ENST00000438092 RPS6KA2Q15349 733 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 SND1Q7KZF4 910 aaKnown RBP eCLIP11.39□□□□□ -0.59
SHPRH-206ENST00000438092 KRT12Q99456 494 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 MRPL11Q9Y3B7 192 aaKnown RBP11.39□□□□□ -0.59
SHPRH-206ENST00000438092 TBX22Q9Y458 520 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 PPP1R2P41236 205 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 CACNB1Q02641 598 aaPredicted RBP11.39□□□□□ -0.59
SHPRH-206ENST00000438092 PTH1RQ03431 593 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 ME3Q16798 604 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 BLIDQ8IZY5 108 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 LRRC43Q8N309 656 aa11.39□□□□□ -0.59
SHPRH-206ENST00000438092 TMOD1P28289 359 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 SLFN13Q68D06 897 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 ARMCX5Q6P1M9 558 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 LLPHQ9BRT6 129 aaKnown RBP11.38□□□□□ -0.59
SHPRH-206ENST00000438092 PALD1Q9ULE6 856 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 XRCC5P13010 732 aaKnown RBP11.38□□□□□ -0.59
SHPRH-206ENST00000438092 DYNLL1P63167 89 aaKnown RBP11.38□□□□□ -0.59
SHPRH-206ENST00000438092 LACTBP83111 547 aaPredicted RBP11.38□□□□□ -0.59
SHPRH-206ENST00000438092 FAM178BQ8IXR5 827 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 AFAP1L2Q8N4X5 818 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 RASGRP4Q8TDF6 673 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 PUS3Q9BZE2 481 aaKnown RBP11.38□□□□□ -0.59
SHPRH-206ENST00000438092 PPP1R12CQ9BZL4 782 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 SMYD2Q9NRG4 433 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 TMEM191BP0C7N4 346 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 TRIM14Q14142 442 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 NAA35Q5VZE5 725 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 KRBA2Q6ZNG9 492 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 IFT20Q8IY31 132 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 GABPB2Q8TAK5 448 aaPredicted RBP11.38□□□□□ -0.59
SHPRH-206ENST00000438092 AFAP1L1Q8TED9 768 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 ESYT2A0FGR8 921 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 PTPN21Q16825 1174 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 TEKT3Q9BXF9 490 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 PHKA1P46020 1223 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 ERCC6LQ2NKX8 1250 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 SMC5Q8IY18 1101 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 NUP58Q9BVL2 599 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 IFIH1Q9BYX4 1025 aaKnown RBP11.38□□□□□ -0.59
SHPRH-206ENST00000438092 LRFN2Q9ULH4 789 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 BNIP3LO60238 219 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 PHKG2P15735 406 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 TMTC4Q5T4D3 741 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 GJA10Q969M2 543 aa11.38□□□□□ -0.59
SHPRH-206ENST00000438092 LOC102724428A0A0B4J2F2 783 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 I3L4J1 428 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 RXRBP28702 533 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 SIK1P57059 783 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 ATP11AP98196 1134 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 ZBTB38Q8NAP3 1195 aaPredicted RBP11.37□□□□□ -0.59
SHPRH-206ENST00000438092 EDC4Q6P2E9 1401 aaKnown RBP11.37□□□□□ -0.59
SHPRH-206ENST00000438092 ZNF804BA4D1E1 1349 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 KCNK3O14649 394 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 ERFEQ4G0M1 354 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 ATP8A2Q9NTI2 1148 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 PRKAG2Q9UGJ0 569 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 NUB1Q9Y5A7 615 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 PARD3Q8TEW0 1356 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 TNKSO95271 1327 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 GSTA1P08263 222 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 GSTA2P09210 222 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 SRGAP1Q7Z6B7 1085 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 ZBTB33Q86T24 672 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 MCUR1Q96AQ8 359 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 SPATA17Q96L03 361 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 DESI2Q9BSY9 194 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 SEC31BQ9NQW1 1179 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 HAUS2Q9NVX0 235 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 RAB20Q9NX57 234 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 STK24Q9Y6E0 443 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 ARHGEF10O15013 1369 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 SARNPP82979 210 aaKnown RBP11.37□□□□□ -0.59
SHPRH-206ENST00000438092 TESK2Q96S53 571 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms