RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 PLCD4Q9BRC7 762 aa6.02□□□□□ -1.45
HMGB1P31-201ENST00000437242 SUPT16HQ9Y5B9 1047 aaKnown RBP6.02□□□□□ -1.45
HMGB1P31-201ENST00000437242 ROBO2Q9HCK4 1378 aa6.02□□□□□ -1.45
HMGB1P31-201ENST00000437242 SIGLEC6O43699 453 aa6.01□□□□□ -1.45
HMGB1P31-201ENST00000437242 CLEC3AO75596 197 aa6.01□□□□□ -1.45
HMGB1P31-201ENST00000437242 SYN1P17600 705 aa6.01□□□□□ -1.45
HMGB1P31-201ENST00000437242 ENDOUP21128 410 aaKnown RBP6.01□□□□□ -1.45
HMGB1P31-201ENST00000437242 GALNT18Q6P9A2 607 aa6.01□□□□□ -1.45
HMGB1P31-201ENST00000437242 PANK1Q8TE04 598 aa6.01□□□□□ -1.45
HMGB1P31-201ENST00000437242 ZNF512BQ96KM6 892 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P31-201ENST00000437242 PRDM14Q9GZV8 571 aa6.01□□□□□ -1.45
HMGB1P31-201ENST00000437242 CNTD2Q9H8S5 307 aa6.01□□□□□ -1.45
HMGB1P31-201ENST00000437242 RTEL1Q9NZ71 1219 aa6.01□□□□□ -1.45
HMGB1P31-201ENST00000437242 TNFRSF10DQ9UBN6 386 aa6.01□□□□□ -1.45
HMGB1P31-201ENST00000437242 GPR55Q9Y2T6 319 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P31-201ENST00000437242 ATE1O95260 518 aa6□□□□□ -1.45
HMGB1P31-201ENST00000437242 MPOP05164 745 aa6□□□□□ -1.45
HMGB1P31-201ENST00000437242 EIF4A3P38919 411 aaKnown RBP6□□□□□ -1.45
HMGB1P31-201ENST00000437242 ARL4AP40617 200 aa6□□□□□ -1.45
HMGB1P31-201ENST00000437242 ERVFRD-1P60508 538 aa6□□□□□ -1.45
HMGB1P31-201ENST00000437242 YBX1P67809 324 aaKnown RBP6□□□□□ -1.45
HMGB1P31-201ENST00000437242 TMEM62Q0P6H9 643 aa6□□□□□ -1.45
HMGB1P31-201ENST00000437242 CDCP2Q5VXM1 449 aa6□□□□□ -1.45
HMGB1P31-201ENST00000437242 FBXL19Q6PCT2 694 aa6□□□□□ -1.45
HMGB1P31-201ENST00000437242 ERMP1Q7Z2K6 904 aa6□□□□□ -1.45
HMGB1P31-201ENST00000437242 DACT3Q96B18 629 aaPredicted RBP6□□□□□ -1.45
HMGB1P31-201ENST00000437242 KCNQ5Q9NR82 932 aa6□□□□□ -1.45
HMGB1P31-201ENST00000437242 CHST7Q9NS84 486 aa6□□□□□ -1.45
HMGB1P31-201ENST00000437242 WTIPA6NIX2 430 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P31-201ENST00000437242 FADS2P1A8MWK0 482 aa5.99□□□□□ -1.45
HMGB1P31-201ENST00000437242 CCNFP41002 786 aa5.99□□□□□ -1.45
HMGB1P31-201ENST00000437242 CDR1P51861 262 aa5.99□□□□□ -1.45
HMGB1P31-201ENST00000437242 TAGLNQ01995 201 aaKnown RBP5.99□□□□□ -1.45
HMGB1P31-201ENST00000437242 LAPTM5Q13571 262 aa5.99□□□□□ -1.45
HMGB1P31-201ENST00000437242 HSF5Q4G112 596 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P31-201ENST00000437242 NLRC3Q7RTR2 1065 aa5.99□□□□□ -1.45
HMGB1P31-201ENST00000437242 MZB1Q8WU39 189 aa5.99□□□□□ -1.45
HMGB1P31-201ENST00000437242 MKRN2Q9H000 416 aaKnown RBP5.99□□□□□ -1.45
HMGB1P31-201ENST00000437242 CNNM2Q9H8M5 875 aa5.99□□□□□ -1.45
HMGB1P31-201ENST00000437242 COPRSQ9NQ92 184 aa5.99□□□□□ -1.45
HMGB1P31-201ENST00000437242 MEIS1O00470 390 aa5.98□□□□□ -1.45
HMGB1P31-201ENST00000437242 IRS4O14654 1257 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P31-201ENST00000437242 RAB3GAP1Q15042 981 aa5.98□□□□□ -1.45
HMGB1P31-201ENST00000437242 CNKSR3Q6P9H4 555 aa5.98□□□□□ -1.45
HMGB1P31-201ENST00000437242 TMC6Q7Z403 805 aa5.98□□□□□ -1.45
HMGB1P31-201ENST00000437242 SP8Q8IXZ3 490 aa5.98□□□□□ -1.45
HMGB1P31-201ENST00000437242 ATG4CQ96DT6 458 aa5.98□□□□□ -1.45
HMGB1P31-201ENST00000437242 CDADC1Q9BWV3 514 aa5.98□□□□□ -1.45
HMGB1P31-201ENST00000437242 XYLT2Q9H1B5 865 aa5.98□□□□□ -1.45
HMGB1P31-201ENST00000437242 MINPP1Q9UNW1 487 aa5.98□□□□□ -1.45
HMGB1P31-201ENST00000437242 PCDHB12Q9Y5F1 795 aa5.98□□□□□ -1.45
HMGB1P31-201ENST00000437242 ADAMTS20P59510 1910 aa5.97□□□□□ -1.45
HMGB1P31-201ENST00000437242 OTOL1A6NHN0 477 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P31-201ENST00000437242 GREM1O60565 184 aa5.97□□□□□ -1.45
HMGB1P31-201ENST00000437242 PRKCAP17252 672 aa5.97□□□□□ -1.45
HMGB1P31-201ENST00000437242 CRKP46108 304 aa5.97□□□□□ -1.45
HMGB1P31-201ENST00000437242 KIR3DS1Q14943 382 aa5.97□□□□□ -1.45
HMGB1P31-201ENST00000437242 ERICH6BQ5W0A0 696 aa5.97□□□□□ -1.45
HMGB1P31-201ENST00000437242 GK5Q6ZS86 529 aa5.97□□□□□ -1.45
HMGB1P31-201ENST00000437242 NUP43Q8NFH3 380 aa5.97□□□□□ -1.45
HMGB1P31-201ENST00000437242 CXorf38Q8TB03 319 aa5.97□□□□□ -1.45
HMGB1P31-201ENST00000437242 EHMT1Q9H9B1 1298 aa5.97□□□□□ -1.45
HMGB1P31-201ENST00000437242 EPB41L4AQ9HCS5 686 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P31-201ENST00000437242 ERVK13-1Q9NX77 482 aa5.97□□□□□ -1.45
HMGB1P31-201ENST00000437242 GFOD1Q9NXC2 390 aa5.97□□□□□ -1.45
HMGB1P31-201ENST00000437242 FBXL21Q9UKT6 434 aa5.97□□□□□ -1.45
HMGB1P31-201ENST00000437242 NUDT19A8MXV4 375 aa5.96□□□□□ -1.46
HMGB1P31-201ENST00000437242 ZNF205O95201 554 aa5.96□□□□□ -1.46
HMGB1P31-201ENST00000437242 MCM4P33991 863 aa5.96□□□□□ -1.46
HMGB1P31-201ENST00000437242 BMP8BP34820 402 aa5.96□□□□□ -1.46
HMGB1P31-201ENST00000437242 CYP4F8P98187 520 aa5.96□□□□□ -1.46
HMGB1P31-201ENST00000437242 VMACQ2NL98 169 aa5.96□□□□□ -1.46
HMGB1P31-201ENST00000437242 SEZ6Q53EL9 994 aa5.96□□□□□ -1.46
HMGB1P31-201ENST00000437242 SLCO6A1Q86UG4 719 aa5.96□□□□□ -1.46
HMGB1P31-201ENST00000437242 FEZF2Q8TBJ5 459 aa5.96□□□□□ -1.46
HMGB1P31-201ENST00000437242 ZNF296Q8WUU4 475 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P31-201ENST00000437242 SLC6A18Q96N87 628 aa5.96□□□□□ -1.46
HMGB1P31-201ENST00000437242 KLHL14Q9P2G3 628 aa5.96□□□□□ -1.46
HMGB1P31-201ENST00000437242 A0A1W2PQ45 241 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P31-201ENST00000437242 A0A1W2PQY0 241 aa5.95□□□□□ -1.46
HMGB1P31-201ENST00000437242 NME1P15531 152 aaKnown RBP5.95□□□□□ -1.46
HMGB1P31-201ENST00000437242 ERCC3P19447 782 aa5.95□□□□□ -1.46
HMGB1P31-201ENST00000437242 CLCQ05315 142 aa5.95□□□□□ -1.46
HMGB1P31-201ENST00000437242 APOBRQ0VD83 1088 aa5.95□□□□□ -1.46
HMGB1P31-201ENST00000437242 LRRFIP1Q32MZ4 808 aaKnown RBP5.95□□□□□ -1.46
HMGB1P31-201ENST00000437242 CRTC3Q6UUV7 619 aa5.95□□□□□ -1.46
HMGB1P31-201ENST00000437242 HS2ST1Q7LGA3 356 aa5.95□□□□□ -1.46
HMGB1P31-201ENST00000437242 LDHDQ86WU2 507 aa5.95□□□□□ -1.46
HMGB1P31-201ENST00000437242 FAM129CQ86XR2 697 aa5.95□□□□□ -1.46
HMGB1P31-201ENST00000437242 TMEFF1Q8IYR6 380 aa5.95□□□□□ -1.46
HMGB1P31-201ENST00000437242 REXO1Q8N1G1 1221 aaKnown RBP5.95□□□□□ -1.46
HMGB1P31-201ENST00000437242 DSCC1Q9BVC3 393 aa5.95□□□□□ -1.46
HMGB1P31-201ENST00000437242 TNFRSF12AQ9NP84 129 aa5.95□□□□□ -1.46
HMGB1P31-201ENST00000437242 UBP1Q9NZI7 540 aa5.95□□□□□ -1.46
HMGB1P31-201ENST00000437242 GGT7Q9UJ14 662 aa5.95□□□□□ -1.46
HMGB1P31-201ENST00000437242 TNFRSF10CO14798 259 aa5.94□□□□□ -1.46
HMGB1P31-201ENST00000437242 CTSKP43235 329 aa5.94□□□□□ -1.46
HMGB1P31-201ENST00000437242 ZNF165P49910 485 aa5.94□□□□□ -1.46
HMGB1P31-201ENST00000437242 IGDCC3Q8IVU1 814 aa5.94□□□□□ -1.46
HMGB1P31-201ENST00000437242 TMEM192Q8IY95 271 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms