RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 FPGSQ05932 587 aa16.02■□□□□ 0.16
CDC42EP1-204ENST00000434728 ZNF792Q3KQV3 632 aa16.02■□□□□ 0.16
CDC42EP1-204ENST00000434728 CPXCR1Q8N123 301 aa16.02■□□□□ 0.16
CDC42EP1-204ENST00000434728 MAFAQ8NHW3 353 aaPredicted RBP16.02■□□□□ 0.16
CDC42EP1-204ENST00000434728 VTI1AQ96AJ9 217 aa16.02■□□□□ 0.16
CDC42EP1-204ENST00000434728 LENG1Q96BZ8 264 aaPredicted RBP16.02■□□□□ 0.16
CDC42EP1-204ENST00000434728 STARD7Q9NQZ5 370 aa16.02■□□□□ 0.16
CDC42EP1-204ENST00000434728 ZNF214Q9UL59 606 aaPredicted RBP16.02■□□□□ 0.16
CDC42EP1-204ENST00000434728 FAM184BQ9ULE4 1060 aa16.02■□□□□ 0.16
CDC42EP1-204ENST00000434728 ADAMTS5Q9UNA0 930 aa16.02■□□□□ 0.16
CDC42EP1-204ENST00000434728 MYH4Q9Y623 1939 aa16.02■□□□□ 0.15
CDC42EP1-204ENST00000434728 PRPF38AQ8NAV1 312 aaKnown RBP16.01■□□□□ 0.15
CDC42EP1-204ENST00000434728 KIFC2Q96AC6 838 aa16.01■□□□□ 0.15
CDC42EP1-204ENST00000434728 COL25A1Q9BXS0 654 aaPredicted RBP16.01■□□□□ 0.15
CDC42EP1-204ENST00000434728 SEMA6BQ9H3T3 888 aa16.01■□□□□ 0.15
CDC42EP1-204ENST00000434728 SPC25Q9HBM1 224 aa16.01■□□□□ 0.15
CDC42EP1-204ENST00000434728 ROBO3Q96MS0 1386 aa16■□□□□ 0.15
CDC42EP1-204ENST00000434728 F5H6K3 240 aa16■□□□□ 0.15
CDC42EP1-204ENST00000434728 SMARCA5O60264 1052 aaPredicted RBP16■□□□□ 0.15
CDC42EP1-204ENST00000434728 FOSL2P15408 326 aa16■□□□□ 0.15
CDC42EP1-204ENST00000434728 KLRC3Q07444 240 aa16■□□□□ 0.15
CDC42EP1-204ENST00000434728 ZNF444Q8N0Y2 327 aaPredicted RBP16■□□□□ 0.15
CDC42EP1-204ENST00000434728 ANKRD35Q8N283 1001 aa16■□□□□ 0.15
CDC42EP1-204ENST00000434728 MSL3Q8N5Y2 521 aaKnown RBP16■□□□□ 0.15
CDC42EP1-204ENST00000434728 MYLIPQ8WY64 445 aa16■□□□□ 0.15
CDC42EP1-204ENST00000434728 TSEN34Q9BSV6 310 aaKnown RBP16■□□□□ 0.15
CDC42EP1-204ENST00000434728 ECHDC1Q9NTX5 307 aa16■□□□□ 0.15
CDC42EP1-204ENST00000434728 NYAP2Q9P242 653 aa16■□□□□ 0.15
CDC42EP1-204ENST00000434728 CLIP2Q9UDT6 1046 aa16■□□□□ 0.15
CDC42EP1-204ENST00000434728 SYNGAP1Q96PV0 1343 aa15.99■□□□□ 0.15
CDC42EP1-204ENST00000434728 SYNRGQ9UMZ2 1314 aa15.99■□□□□ 0.15
CDC42EP1-204ENST00000434728 NDUFB10O96000 172 aa15.99■□□□□ 0.15
CDC42EP1-204ENST00000434728 C6orf222P0C671 652 aaPredicted RBP15.99■□□□□ 0.15
CDC42EP1-204ENST00000434728 ZNF865P0CJ78 1059 aaPredicted RBP15.99■□□□□ 0.15
CDC42EP1-204ENST00000434728 RASA1P20936 1047 aa15.99■□□□□ 0.15
CDC42EP1-204ENST00000434728 ACLYP53396 1101 aa15.99■□□□□ 0.15
CDC42EP1-204ENST00000434728 IKQ13123 557 aaPredicted RBP15.99■□□□□ 0.15
CDC42EP1-204ENST00000434728 LRRFIP1Q32MZ4 808 aaKnown RBP15.99■□□□□ 0.15
CDC42EP1-204ENST00000434728 GLT1D1Q96MS3 346 aa15.99■□□□□ 0.15
CDC42EP1-204ENST00000434728 STRBPQ96SI9 672 aaKnown RBP15.99■□□□□ 0.15
CDC42EP1-204ENST00000434728 RCAN3Q9UKA8 241 aa15.99■□□□□ 0.15
CDC42EP1-204ENST00000434728 MROH7Q68CQ1 1323 aa15.98■□□□□ 0.15
CDC42EP1-204ENST00000434728 MOXD2PA6NHM9 499 aa15.98■□□□□ 0.15
CDC42EP1-204ENST00000434728 KIAA0355O15063 1070 aa15.98■□□□□ 0.15
CDC42EP1-204ENST00000434728 GNAT2P19087 354 aa15.98■□□□□ 0.15
CDC42EP1-204ENST00000434728 SBK1Q52WX2 424 aa15.98■□□□□ 0.15
CDC42EP1-204ENST00000434728 GIMAP6Q6P9H5 292 aa15.98■□□□□ 0.15
CDC42EP1-204ENST00000434728 CCDC174Q6PII3 467 aa15.98■□□□□ 0.15
CDC42EP1-204ENST00000434728 KBTBD3Q8NAB2 608 aa15.98■□□□□ 0.15
CDC42EP1-204ENST00000434728 REPS2Q8NFH8 660 aa15.98■□□□□ 0.15
CDC42EP1-204ENST00000434728 APPBP2Q92624 585 aa15.98■□□□□ 0.15
CDC42EP1-204ENST00000434728 RAVER2Q9HCJ3 691 aaKnown RBP15.98■□□□□ 0.15
CDC42EP1-204ENST00000434728 FBXO40Q9UH90 709 aa15.98■□□□□ 0.15
CDC42EP1-204ENST00000434728 EYSQ5T1H1 3165 aa15.98■□□□□ 0.15
CDC42EP1-204ENST00000434728 GREB1LQ9C091 1923 aaPredicted RBP15.98■□□□□ 0.15
CDC42EP1-204ENST00000434728 MCM3APO60318 1980 aa15.97■□□□□ 0.15
CDC42EP1-204ENST00000434728 GSG1L2A8MUP6 293 aa15.97■□□□□ 0.15
CDC42EP1-204ENST00000434728 ADAMTS4O75173 837 aa15.97■□□□□ 0.15
CDC42EP1-204ENST00000434728 PRDM1O75626 825 aa15.97■□□□□ 0.15
CDC42EP1-204ENST00000434728 NEFLP07196 543 aa15.97■□□□□ 0.15
CDC42EP1-204ENST00000434728 ZFYP08048 801 aaPredicted RBP15.97■□□□□ 0.15
CDC42EP1-204ENST00000434728 KCNA10Q16322 511 aa15.97■□□□□ 0.15
CDC42EP1-204ENST00000434728 NOL8Q76FK4 1167 aaKnown RBP15.97■□□□□ 0.15
CDC42EP1-204ENST00000434728 PCSK9Q8NBP7 692 aaKnown RBP15.97■□□□□ 0.15
CDC42EP1-204ENST00000434728 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.97■□□□□ 0.15
CDC42EP1-204ENST00000434728 NACAP1Q9BZK3 213 aa15.97■□□□□ 0.15
CDC42EP1-204ENST00000434728 HOMER2Q9NSB8 354 aa15.97■□□□□ 0.15
CDC42EP1-204ENST00000434728 FEM1BQ9UK73 627 aa15.97■□□□□ 0.15
CDC42EP1-204ENST00000434728 TMEM265A0A087WTH1 108 aa15.96■□□□□ 0.15
CDC42EP1-204ENST00000434728 RNF113AO15541 343 aaKnown RBP15.96■□□□□ 0.15
CDC42EP1-204ENST00000434728 GPAA1O43292 621 aa15.96■□□□□ 0.15
CDC42EP1-204ENST00000434728 DUSP11O75319 330 aaKnown RBP15.96■□□□□ 0.15
CDC42EP1-204ENST00000434728 TTLL1O95922 423 aa15.96■□□□□ 0.15
CDC42EP1-204ENST00000434728 SLC3A2P08195 630 aaKnown RBP15.96■□□□□ 0.15
CDC42EP1-204ENST00000434728 TSPY3P0CV98 308 aa15.96■□□□□ 0.15
CDC42EP1-204ENST00000434728 TSPY8P0CW00 308 aa15.96■□□□□ 0.15
CDC42EP1-204ENST00000434728 ITGB8P26012 769 aa15.96■□□□□ 0.15
CDC42EP1-204ENST00000434728 ACVR2BQ13705 512 aa15.96■□□□□ 0.15
CDC42EP1-204ENST00000434728 ANKRD33Q7Z3H0 272 aa15.96■□□□□ 0.15
CDC42EP1-204ENST00000434728 LRRC47Q8N1G4 583 aaKnown RBP15.96■□□□□ 0.15
CDC42EP1-204ENST00000434728 OSBP2Q969R2 916 aa15.96■□□□□ 0.15
CDC42EP1-204ENST00000434728 TOX2Q96NM4 488 aa15.96■□□□□ 0.15
CDC42EP1-204ENST00000434728 TTYH1Q9H313 450 aaPredicted RBP15.96■□□□□ 0.15
CDC42EP1-204ENST00000434728 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.96■□□□□ 0.15
CDC42EP1-204ENST00000434728 RIPK3Q9Y572 518 aa15.96■□□□□ 0.15
CDC42EP1-204ENST00000434728 PRUNE2Q8WUY3 3088 aa15.96■□□□□ 0.15
CDC42EP1-204ENST00000434728 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.95■□□□□ 0.14
CDC42EP1-204ENST00000434728 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.95■□□□□ 0.14
CDC42EP1-204ENST00000434728 TLR3O15455 904 aaKnown RBP15.95■□□□□ 0.14
CDC42EP1-204ENST00000434728 SNAI1O95863 264 aaPredicted RBP15.95■□□□□ 0.14
CDC42EP1-204ENST00000434728 DNAJB2P25686 324 aa15.95■□□□□ 0.14
CDC42EP1-204ENST00000434728 PDE4BQ07343 736 aa15.95■□□□□ 0.14
CDC42EP1-204ENST00000434728 FAAP100Q0VG06 881 aa15.95■□□□□ 0.14
CDC42EP1-204ENST00000434728 GNASQ5JWF2 1037 aa15.95■□□□□ 0.14
CDC42EP1-204ENST00000434728 TSHZ3Q63HK5 1081 aa15.95■□□□□ 0.14
CDC42EP1-204ENST00000434728 MAMDC4Q6UXC1 1216 aa15.95■□□□□ 0.14
CDC42EP1-204ENST00000434728 CCDC129Q6ZRS4 1044 aa15.95■□□□□ 0.14
CDC42EP1-204ENST00000434728 ZNF467Q7Z7K2 595 aaPredicted RBP15.95■□□□□ 0.14
CDC42EP1-204ENST00000434728 CHST13Q8NET6 341 aa15.95■□□□□ 0.14
CDC42EP1-204ENST00000434728 CEP95Q96GE4 821 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms