RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 LDLRAD1Q5T700 205 aa6.95□□□□□ -1.3
PTPN4-205ENST00000433888 CEP128Q6ZU80 1094 aa6.95□□□□□ -1.3
PTPN4-205ENST00000433888 NT5C1AQ9BXI3 368 aa6.95□□□□□ -1.3
PTPN4-205ENST00000433888 GGT7Q9UJ14 662 aa6.95□□□□□ -1.3
PTPN4-205ENST00000433888 CNOT6Q9ULM6 557 aaKnown RBP6.95□□□□□ -1.3
PTPN4-205ENST00000433888 KCTD3Q9Y597 815 aa6.95□□□□□ -1.3
PTPN4-205ENST00000433888 NCANO14594 1321 aa6.95□□□□□ -1.3
PTPN4-205ENST00000433888 FKTNO75072 461 aa6.94□□□□□ -1.3
PTPN4-205ENST00000433888 CLEC3AO75596 197 aa6.94□□□□□ -1.3
PTPN4-205ENST00000433888 SRSF3P84103 164 aaKnown RBP6.94□□□□□ -1.3
PTPN4-205ENST00000433888 SLC14A2Q15849 920 aa6.94□□□□□ -1.3
PTPN4-205ENST00000433888 GK5Q6ZS86 529 aa6.94□□□□□ -1.3
PTPN4-205ENST00000433888 HS2ST1Q7LGA3 356 aa6.94□□□□□ -1.3
PTPN4-205ENST00000433888 TNFRSF10DQ9UBN6 386 aa6.94□□□□□ -1.3
PTPN4-205ENST00000433888 B8ZZF3 427 aa6.93□□□□□ -1.3
PTPN4-205ENST00000433888 CTSKP43235 329 aa6.93□□□□□ -1.3
PTPN4-205ENST00000433888 ERVFRD-1P60508 538 aa6.93□□□□□ -1.3
PTPN4-205ENST00000433888 KIR3DS1Q14943 382 aa6.93□□□□□ -1.3
PTPN4-205ENST00000433888 ZNF385BQ569K4 471 aa6.93□□□□□ -1.3
PTPN4-205ENST00000433888 LCE5AQ5TCM9 118 aa6.93□□□□□ -1.3
PTPN4-205ENST00000433888 PANK1Q8TE04 598 aa6.93□□□□□ -1.3
PTPN4-205ENST00000433888 EAF1Q96JC9 268 aaPredicted RBP6.93□□□□□ -1.3
PTPN4-205ENST00000433888 FCRL2Q96LA5 508 aaPredicted RBP6.93□□□□□ -1.3
PTPN4-205ENST00000433888 CNTD2Q9H8S5 307 aa6.93□□□□□ -1.3
PTPN4-205ENST00000433888 EPB41L4AQ9HCS5 686 aaPredicted RBP6.93□□□□□ -1.3
PTPN4-205ENST00000433888 PARD6AQ9NPB6 346 aa6.93□□□□□ -1.3
PTPN4-205ENST00000433888 CHST7Q9NS84 486 aa6.93□□□□□ -1.3
PTPN4-205ENST00000433888 SSU72P8A0A1W2PR75 194 aa6.92□□□□□ -1.3
PTPN4-205ENST00000433888 ZNF205O95201 554 aa6.92□□□□□ -1.3
PTPN4-205ENST00000433888 SDHBP21912 280 aa6.92□□□□□ -1.3
PTPN4-205ENST00000433888 VIPR1P32241 457 aa6.92□□□□□ -1.3
PTPN4-205ENST00000433888 ZNF165P49910 485 aa6.92□□□□□ -1.3
PTPN4-205ENST00000433888 RTP1P59025 263 aa6.92□□□□□ -1.3
PTPN4-205ENST00000433888 APOBRQ0VD83 1088 aa6.92□□□□□ -1.3
PTPN4-205ENST00000433888 LRRFIP1Q32MZ4 808 aaKnown RBP6.92□□□□□ -1.3
PTPN4-205ENST00000433888 HSF5Q4G112 596 aaPredicted RBP6.92□□□□□ -1.3
PTPN4-205ENST00000433888 TMEM52Q8NDY8 209 aa6.92□□□□□ -1.3
PTPN4-205ENST00000433888 GIPC2Q8TF65 315 aa6.92□□□□□ -1.3
PTPN4-205ENST00000433888 NKD1Q969G9 470 aa6.92□□□□□ -1.3
PTPN4-205ENST00000433888 KCNC2Q96PR1 638 aa6.92□□□□□ -1.3
PTPN4-205ENST00000433888 SLC9A7Q96T83 725 aa6.92□□□□□ -1.3
PTPN4-205ENST00000433888 BCL2L13Q9BXK5 485 aa6.92□□□□□ -1.3
PTPN4-205ENST00000433888 KLHL14Q9P2G3 628 aa6.92□□□□□ -1.3
PTPN4-205ENST00000433888 BMP8BP34820 402 aa6.91□□□□□ -1.3
PTPN4-205ENST00000433888 EPHB3P54753 998 aa6.91□□□□□ -1.3
PTPN4-205ENST00000433888 CTSWP56202 376 aa6.91□□□□□ -1.3
PTPN4-205ENST00000433888 AUHQ13825 339 aaKnown RBP6.91□□□□□ -1.3
PTPN4-205ENST00000433888 INTS3Q68E01 1043 aaKnown RBP6.91□□□□□ -1.3
PTPN4-205ENST00000433888 SLCO6A1Q86UG4 719 aa6.91□□□□□ -1.3
PTPN4-205ENST00000433888 MARCH10Q8NA82 808 aaPredicted RBP6.91□□□□□ -1.3
PTPN4-205ENST00000433888 DACT3Q96B18 629 aaPredicted RBP6.91□□□□□ -1.3
PTPN4-205ENST00000433888 SLC6A18Q96N87 628 aa6.91□□□□□ -1.3
PTPN4-205ENST00000433888 KRTAP9-3Q9BYQ3 159 aa6.91□□□□□ -1.3
PTPN4-205ENST00000433888 ERVK13-1Q9NX77 482 aa6.91□□□□□ -1.3
PTPN4-205ENST00000433888 GFOD1Q9NXC2 390 aa6.91□□□□□ -1.3
PTPN4-205ENST00000433888 PRR13Q9NZ81 148 aa6.91□□□□□ -1.3
PTPN4-205ENST00000433888 IRS4O14654 1257 aaPredicted RBP6.9□□□□□ -1.3
PTPN4-205ENST00000433888 N4BP3O15049 544 aa6.9□□□□□ -1.3
PTPN4-205ENST00000433888 TRIM13O60858 407 aa6.9□□□□□ -1.3
PTPN4-205ENST00000433888 ACRP10323 421 aa6.9□□□□□ -1.3
PTPN4-205ENST00000433888 BMP7P18075 431 aa6.9□□□□□ -1.3
PTPN4-205ENST00000433888 MCM4P33991 863 aa6.9□□□□□ -1.3
PTPN4-205ENST00000433888 ZNF326Q5BKZ1 582 aaKnown RBP6.9□□□□□ -1.3
PTPN4-205ENST00000433888 TCERG1LQ5VWI1 586 aa6.9□□□□□ -1.3
PTPN4-205ENST00000433888 GALNT18Q6P9A2 607 aa6.9□□□□□ -1.3
PTPN4-205ENST00000433888 SIGLEC10Q96LC7 697 aa6.9□□□□□ -1.3
PTPN4-205ENST00000433888 SIRT5Q9NXA8 310 aa6.9□□□□□ -1.3
PTPN4-205ENST00000433888 GPR55Q9Y2T6 319 aaPredicted RBP6.9□□□□□ -1.3
PTPN4-205ENST00000433888 A0A0G2JLL6 359 aaPredicted RBP6.89□□□□□ -1.31
PTPN4-205ENST00000433888 WTIPA6NIX2 430 aaPredicted RBP6.89□□□□□ -1.31
PTPN4-205ENST00000433888 SHOXO15266 292 aa6.89□□□□□ -1.31
PTPN4-205ENST00000433888 VAV1P15498 845 aa6.89□□□□□ -1.31
PTPN4-205ENST00000433888 PI3P19957 117 aa6.89□□□□□ -1.31
PTPN4-205ENST00000433888 BUD31P41223 144 aaPredicted RBP6.89□□□□□ -1.31
PTPN4-205ENST00000433888 TMEFF1Q8IYR6 380 aa6.89□□□□□ -1.31
PTPN4-205ENST00000433888 MKRN2Q9H000 416 aaKnown RBP6.89□□□□□ -1.31
PTPN4-205ENST00000433888 SUCOQ9UBS9 1254 aaKnown RBP6.89□□□□□ -1.31
PTPN4-205ENST00000433888 ACSL6Q9UKU0 697 aa6.89□□□□□ -1.31
PTPN4-205ENST00000433888 PCDHB12Q9Y5F1 795 aa6.89□□□□□ -1.31
PTPN4-205ENST00000433888 C9IYK1 514 aa6.88□□□□□ -1.31
PTPN4-205ENST00000433888 MEIS1O00470 390 aa6.88□□□□□ -1.31
PTPN4-205ENST00000433888 ABLIM1O14639 778 aa6.88□□□□□ -1.31
PTPN4-205ENST00000433888 CDR1P51861 262 aa6.88□□□□□ -1.31
PTPN4-205ENST00000433888 RTP2Q5QGT7 225 aa6.88□□□□□ -1.31
PTPN4-205ENST00000433888 TMEM151BQ8IW70 566 aa6.88□□□□□ -1.31
PTPN4-205ENST00000433888 FBXL21Q9UKT6 434 aa6.88□□□□□ -1.31
PTPN4-205ENST00000433888 ZNRF3Q9ULT6 936 aa6.88□□□□□ -1.31
PTPN4-205ENST00000433888 IRAK3Q9Y616 596 aa6.88□□□□□ -1.31
PTPN4-205ENST00000433888 A0A1W2PQ45 241 aaPredicted RBP6.87□□□□□ -1.31
PTPN4-205ENST00000433888 A0A1W2PQY0 241 aa6.87□□□□□ -1.31
PTPN4-205ENST00000433888 RFXAPO00287 272 aa6.87□□□□□ -1.31
PTPN4-205ENST00000433888 ENDOUP21128 410 aaKnown RBP6.87□□□□□ -1.31
PTPN4-205ENST00000433888 LAPTM5Q13571 262 aa6.87□□□□□ -1.31
PTPN4-205ENST00000433888 C7orf61Q8IZ16 206 aa6.87□□□□□ -1.31
PTPN4-205ENST00000433888 ZCCHC4Q9H5U6 513 aa6.87□□□□□ -1.31
PTPN4-205ENST00000433888 TNFRSF12AQ9NP84 129 aa6.87□□□□□ -1.31
PTPN4-205ENST00000433888 AP5S1Q9NUS5 200 aa6.87□□□□□ -1.31
PTPN4-205ENST00000433888 MPOP05164 745 aa6.86□□□□□ -1.31
PTPN4-205ENST00000433888 PRKCAP17252 672 aa6.86□□□□□ -1.31
PTPN4-205ENST00000433888 CBX2Q14781 532 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms