RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 EPB41L2O43491 1005 aaKnown RBP18.14■□□□□ 0.49
TREX1-201ENST00000433541 CNMDO75829 334 aa18.14■□□□□ 0.49
TREX1-201ENST00000433541 PARP1P09874 1014 aaKnown RBP18.14■□□□□ 0.49
TREX1-201ENST00000433541 PSMA5P28066 241 aa18.14■□□□□ 0.49
TREX1-201ENST00000433541 GPATCH4Q5T3I0 446 aaKnown RBP18.14■□□□□ 0.49
TREX1-201ENST00000433541 BLOC1S2Q6QNY1 142 aa18.14■□□□□ 0.49
TREX1-201ENST00000433541 NUP133Q8WUM0 1156 aa18.14■□□□□ 0.49
TREX1-201ENST00000433541 ANKS1AQ92625 1134 aa18.14■□□□□ 0.49
TREX1-201ENST00000433541 TCEANC2Q96MN5 208 aa18.14■□□□□ 0.49
TREX1-201ENST00000433541 PORCNQ9H237 461 aa18.14■□□□□ 0.49
TREX1-201ENST00000433541 NAP1L2Q9ULW6 460 aaPredicted RBP18.14■□□□□ 0.49
TREX1-201ENST00000433541 CASTP20810 708 aaKnown RBP18.13■□□□□ 0.49
TREX1-201ENST00000433541 CTGFP29279 349 aa18.13■□□□□ 0.49
TREX1-201ENST00000433541 ZNF543Q08ER8 600 aa18.13■□□□□ 0.49
TREX1-201ENST00000433541 TMEM132BQ14DG7 1078 aa18.13■□□□□ 0.49
TREX1-201ENST00000433541 TSGA10IPQ3SY00 556 aa18.13■□□□□ 0.49
TREX1-201ENST00000433541 ASPRV1Q53RT3 343 aa18.13■□□□□ 0.49
TREX1-201ENST00000433541 SYDE2Q5VT97 1194 aa18.13■□□□□ 0.49
TREX1-201ENST00000433541 SNRNP48Q6IEG0 339 aaKnown RBP18.13■□□□□ 0.49
TREX1-201ENST00000433541 TTBK2Q6IQ55 1244 aa18.13■□□□□ 0.49
TREX1-201ENST00000433541 CCDC174Q6PII3 467 aa18.13■□□□□ 0.49
TREX1-201ENST00000433541 FBXO46Q6PJ61 603 aaPredicted RBP18.13■□□□□ 0.49
TREX1-201ENST00000433541 SYNE3Q6ZMZ3 975 aa18.13■□□□□ 0.49
TREX1-201ENST00000433541 DHX32Q7L7V1 743 aaKnown RBP18.13■□□□□ 0.49
TREX1-201ENST00000433541 TMTC2Q8N394 836 aa18.13■□□□□ 0.49
TREX1-201ENST00000433541 MOV10L1Q9BXT6 1211 aaKnown RBP18.13■□□□□ 0.49
TREX1-201ENST00000433541 ZNFX1Q9P2E3 1918 aaKnown RBP18.12■□□□□ 0.49
TREX1-201ENST00000433541 SH2B2O14492 632 aaPredicted RBP18.12■□□□□ 0.49
TREX1-201ENST00000433541 FDX1P10109 184 aa18.12■□□□□ 0.49
TREX1-201ENST00000433541 STAT3P40763 770 aa18.12■□□□□ 0.49
TREX1-201ENST00000433541 SNAP25P60880 206 aa18.12■□□□□ 0.49
TREX1-201ENST00000433541 CAP1Q01518 475 aa18.12■□□□□ 0.49
TREX1-201ENST00000433541 PRKCZQ05513 592 aa18.12■□□□□ 0.49
TREX1-201ENST00000433541 POTEEQ6S8J3 1075 aa18.12■□□□□ 0.49
TREX1-201ENST00000433541 PLEKHH3Q7Z736 793 aa18.12■□□□□ 0.49
TREX1-201ENST00000433541 IGDCC4Q8TDY8 1250 aa18.12■□□□□ 0.49
TREX1-201ENST00000433541 TEX13BQ9BXU2 312 aa18.12■□□□□ 0.49
TREX1-201ENST00000433541 LY9Q9HBG7 655 aa18.12■□□□□ 0.49
TREX1-201ENST00000433541 SENP2Q9HC62 589 aa18.12■□□□□ 0.49
TREX1-201ENST00000433541 RAVER2Q9HCJ3 691 aaKnown RBP18.12■□□□□ 0.49
TREX1-201ENST00000433541 GPHNQ9NQX3 736 aaPredicted RBP18.12■□□□□ 0.49
TREX1-201ENST00000433541 SRRDQ9UH36 339 aa18.12■□□□□ 0.49
TREX1-201ENST00000433541 PRR12Q9ULL5 1215 aa18.12■□□□□ 0.49
TREX1-201ENST00000433541 PTPN22Q9Y2R2 807 aa18.12■□□□□ 0.49
TREX1-201ENST00000433541 CPA1P15085 419 aa18.11■□□□□ 0.49
TREX1-201ENST00000433541 ERCC3P19447 782 aa18.11■□□□□ 0.49
TREX1-201ENST00000433541 PRMT2P55345 433 aa18.11■□□□□ 0.49
TREX1-201ENST00000433541 GPR142Q7Z601 462 aa18.11■□□□□ 0.49
TREX1-201ENST00000433541 CTCFLQ8NI51 663 aaPredicted RBP18.11■□□□□ 0.49
TREX1-201ENST00000433541 NUDT12Q9BQG2 462 aa18.11■□□□□ 0.49
TREX1-201ENST00000433541 MTA3Q9BTC8 594 aa18.11■□□□□ 0.49
TREX1-201ENST00000433541 UBA5Q9GZZ9 404 aa18.11■□□□□ 0.49
TREX1-201ENST00000433541 HOMER2Q9NSB8 354 aa18.11■□□□□ 0.49
TREX1-201ENST00000433541 BIN2Q9UBW5 565 aaPredicted RBP18.11■□□□□ 0.49
TREX1-201ENST00000433541 SLC12A7Q9Y666 1083 aa18.11■□□□□ 0.49
TREX1-201ENST00000433541 PTCH2Q9Y6C5 1203 aa18.11■□□□□ 0.49
TREX1-201ENST00000433541 PLA2G6O60733 806 aa18.1■□□□□ 0.49
TREX1-201ENST00000433541 SLC25A27O95847 323 aa18.1■□□□□ 0.49
TREX1-201ENST00000433541 COPB2P35606 906 aa18.1■□□□□ 0.49
TREX1-201ENST00000433541 FLT3LGP49771 235 aa18.1■□□□□ 0.49
TREX1-201ENST00000433541 SLC9C1Q4G0N8 1177 aa18.1■□□□□ 0.49
TREX1-201ENST00000433541 ZNF654Q8IZM8 581 aa18.1■□□□□ 0.49
TREX1-201ENST00000433541 SOCS4Q8WXH5 440 aa18.1■□□□□ 0.49
TREX1-201ENST00000433541 MYL10Q9BUA6 226 aa18.1■□□□□ 0.49
TREX1-201ENST00000433541 MROH8Q9H579 483 aa18.1■□□□□ 0.49
TREX1-201ENST00000433541 SLC38A10Q9HBR0 1119 aa18.1■□□□□ 0.49
TREX1-201ENST00000433541 VAT1LQ9HCJ6 419 aa18.1■□□□□ 0.49
TREX1-201ENST00000433541 GABRQQ9UN88 632 aa18.1■□□□□ 0.49
TREX1-201ENST00000433541 ADAMTS5Q9UNA0 930 aa18.1■□□□□ 0.49
TREX1-201ENST00000433541 WDR19Q8NEZ3 1342 aa18.09■□□□□ 0.49
TREX1-201ENST00000433541 BAZ2BQ9UIF8 2168 aaKnown RBP18.09■□□□□ 0.49
TREX1-201ENST00000433541 KLRF2D3W0D1 207 aa18.09■□□□□ 0.49
TREX1-201ENST00000433541 DDAH1O94760 285 aa18.09■□□□□ 0.49
TREX1-201ENST00000433541 SNHG28P0DPA3 235 aa18.09■□□□□ 0.49
TREX1-201ENST00000433541 KIF5BP33176 963 aa18.09■□□□□ 0.49
TREX1-201ENST00000433541 COL9A3Q14050 684 aaPredicted RBP18.09■□□□□ 0.49
TREX1-201ENST00000433541 C8orf34Q49A92 452 aa18.09■□□□□ 0.49
TREX1-201ENST00000433541 RAB11FIP4Q86YS3 637 aa18.09■□□□□ 0.49
TREX1-201ENST00000433541 CCDC144CPQ8IYA2 1237 aa18.09■□□□□ 0.49
TREX1-201ENST00000433541 SHCBP1Q8NEM2 672 aa18.09■□□□□ 0.49
TREX1-201ENST00000433541 KCNB2Q92953 911 aa18.09■□□□□ 0.49
TREX1-201ENST00000433541 CPVLQ9H3G5 476 aa18.09■□□□□ 0.49
TREX1-201ENST00000433541 ZNF214Q9UL59 606 aaPredicted RBP18.09■□□□□ 0.49
TREX1-201ENST00000433541 CCPG1Q9ULG6 757 aa18.09■□□□□ 0.49
TREX1-201ENST00000433541 CYP46A1Q9Y6A2 500 aa18.09■□□□□ 0.49
TREX1-201ENST00000433541 PLXNA1Q9UIW2 1896 aa18.08■□□□□ 0.49
TREX1-201ENST00000433541 SEC24BO95487 1268 aa18.08■□□□□ 0.48
TREX1-201ENST00000433541 CALM1P0DP23 149 aa18.08■□□□□ 0.48
TREX1-201ENST00000433541 CALM2P0DP24 149 aa18.08■□□□□ 0.48
TREX1-201ENST00000433541 CALM3P0DP25 149 aa18.08■□□□□ 0.48
TREX1-201ENST00000433541 FCER1AP12319 257 aa18.08■□□□□ 0.48
TREX1-201ENST00000433541 ALAS1P13196 640 aa18.08■□□□□ 0.48
TREX1-201ENST00000433541 CYP2B6P20813 491 aa18.08■□□□□ 0.48
TREX1-201ENST00000433541 LIFRP42702 1097 aa18.08■□□□□ 0.48
TREX1-201ENST00000433541 OAZ1P54368 228 aa18.08■□□□□ 0.48
TREX1-201ENST00000433541 KCTD2Q14681 263 aa18.08■□□□□ 0.48
TREX1-201ENST00000433541 GRM4Q14833 912 aa18.08■□□□□ 0.48
TREX1-201ENST00000433541 Q6ZUG5 572 aa18.08■□□□□ 0.48
TREX1-201ENST00000433541 MICU3Q86XE3 530 aa18.08■□□□□ 0.48
TREX1-201ENST00000433541 RIOX2Q8IUF8 465 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms