RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 PPFIBP1Q86W92 1011 aa5.59□□□□□ -1.52
CLK1-204ENST00000432425 SEC16BQ96JE7 1060 aa5.59□□□□□ -1.52
CLK1-204ENST00000432425 DIRC2Q96SL1 478 aa5.59□□□□□ -1.52
CLK1-204ENST00000432425 RNF32Q9H0A6 362 aa5.59□□□□□ -1.52
CLK1-204ENST00000432425 NSUN3Q9H649 340 aaKnown RBP5.59□□□□□ -1.52
CLK1-204ENST00000432425 FAM86C1Q9NVL1 165 aa5.59□□□□□ -1.52
CLK1-204ENST00000432425 ERCC5P28715 1186 aaPredicted RBP5.58□□□□□ -1.52
CLK1-204ENST00000432425 GIPRP48546 466 aa5.58□□□□□ -1.52
CLK1-204ENST00000432425 NOL9Q5SY16 702 aaKnown RBP5.58□□□□□ -1.52
CLK1-204ENST00000432425 DCAF15Q66K64 600 aa5.58□□□□□ -1.52
CLK1-204ENST00000432425 LINC01599Q8WXQ3 324 aa5.58□□□□□ -1.52
CLK1-204ENST00000432425 MAP6Q96JE9 813 aa5.58□□□□□ -1.52
CLK1-204ENST00000432425 GPR160Q9UJ42 338 aa5.58□□□□□ -1.52
CLK1-204ENST00000432425 ZNF281Q9Y2X9 895 aa5.58□□□□□ -1.52
CLK1-204ENST00000432425 TMEM82A0PJX8 343 aa5.57□□□□□ -1.52
CLK1-204ENST00000432425 GSNP06396 782 aa5.57□□□□□ -1.52
CLK1-204ENST00000432425 TCF3P15923 654 aa5.57□□□□□ -1.52
CLK1-204ENST00000432425 BMP8BP34820 402 aa5.57□□□□□ -1.52
CLK1-204ENST00000432425 KIR2DL1P43626 348 aaPredicted RBP5.57□□□□□ -1.52
CLK1-204ENST00000432425 KIR2DL2P43627 348 aaPredicted RBP5.57□□□□□ -1.52
CLK1-204ENST00000432425 SLC14A2Q15849 920 aa5.57□□□□□ -1.52
CLK1-204ENST00000432425 AXDND1Q5T1B0 1012 aaPredicted RBP5.57□□□□□ -1.52
CLK1-204ENST00000432425 CWF19L1Q69YN2 538 aaKnown RBP5.57□□□□□ -1.52
CLK1-204ENST00000432425 C19orf47Q8N9M1 422 aaKnown RBP5.57□□□□□ -1.52
CLK1-204ENST00000432425 G6PC3Q9BUM1 346 aa5.57□□□□□ -1.52
CLK1-204ENST00000432425 SLC6A17Q9H1V8 727 aa5.57□□□□□ -1.52
CLK1-204ENST00000432425 EPB41L4BQ9H329 900 aa5.57□□□□□ -1.52
CLK1-204ENST00000432425 SP110Q9HB58 689 aa5.57□□□□□ -1.52
CLK1-204ENST00000432425 CAPN10Q9HC96 672 aa5.57□□□□□ -1.52
CLK1-204ENST00000432425 CWC22Q9HCG8 908 aaKnown RBP5.57□□□□□ -1.52
CLK1-204ENST00000432425 EBF1Q9UH73 591 aa5.57□□□□□ -1.52
CLK1-204ENST00000432425 ZNF214Q9UL59 606 aaPredicted RBP5.57□□□□□ -1.52
CLK1-204ENST00000432425 STRIP2Q9ULQ0 834 aa5.57□□□□□ -1.52
CLK1-204ENST00000432425 USP2O75604 605 aaPredicted RBP5.56□□□□□ -1.52
CLK1-204ENST00000432425 ITGA4P13612 1032 aa5.56□□□□□ -1.52
CLK1-204ENST00000432425 CTSKP43235 329 aa5.56□□□□□ -1.52
CLK1-204ENST00000432425 SNX17Q15036 470 aa5.56□□□□□ -1.52
CLK1-204ENST00000432425 PPP2R5EQ16537 467 aa5.56□□□□□ -1.52
CLK1-204ENST00000432425 TIGD5Q53EQ6 642 aa5.56□□□□□ -1.52
CLK1-204ENST00000432425 ANKRD39Q53RE8 183 aa5.56□□□□□ -1.52
CLK1-204ENST00000432425 CRTC3Q6UUV7 619 aa5.56□□□□□ -1.52
CLK1-204ENST00000432425 FBXO15Q8NCQ5 510 aaPredicted RBP5.56□□□□□ -1.52
CLK1-204ENST00000432425 FCRL2Q96LA5 508 aaPredicted RBP5.56□□□□□ -1.52
CLK1-204ENST00000432425 CDADC1Q9BWV3 514 aa5.56□□□□□ -1.52
CLK1-204ENST00000432425 PHAXQ9H814 394 aaKnown RBP5.56□□□□□ -1.52
CLK1-204ENST00000432425 GP6Q9HCN6 339 aa5.56□□□□□ -1.52
CLK1-204ENST00000432425 DCP1AQ9NPI6 582 aaPredicted RBP5.56□□□□□ -1.52
CLK1-204ENST00000432425 LTBP3Q9NS15 1303 aa5.56□□□□□ -1.52
CLK1-204ENST00000432425 SHOXO15266 292 aa5.56□□□□□ -1.52
CLK1-204ENST00000432425 ZNF205O95201 554 aa5.56□□□□□ -1.52
CLK1-204ENST00000432425 VAV1P15498 845 aa5.56□□□□□ -1.52
CLK1-204ENST00000432425 CD247P20963 164 aa5.56□□□□□ -1.52
CLK1-204ENST00000432425 RBM25P49756 843 aaKnown RBP5.56□□□□□ -1.52
CLK1-204ENST00000432425 MESP2Q0VG99 397 aa5.56□□□□□ -1.52
CLK1-204ENST00000432425 TCEAL1Q15170 157 aa5.56□□□□□ -1.52
CLK1-204ENST00000432425 GNPTABQ3T906 1256 aa5.56□□□□□ -1.52
CLK1-204ENST00000432425 ZPBP2Q6X784 338 aa5.56□□□□□ -1.52
CLK1-204ENST00000432425 CEP128Q6ZU80 1094 aa5.56□□□□□ -1.52
CLK1-204ENST00000432425 ZNF428Q96B54 188 aa5.56□□□□□ -1.52
CLK1-204ENST00000432425 SHDQ96IW2 340 aa5.56□□□□□ -1.52
CLK1-204ENST00000432425 PPP1R16BQ96T49 567 aa5.56□□□□□ -1.52
CLK1-204ENST00000432425 A0A1W2PQH9 124 aa5.55□□□□□ -1.52
CLK1-204ENST00000432425 PSPNO60542 156 aa5.55□□□□□ -1.52
CLK1-204ENST00000432425 ZNF124Q15973 351 aa5.55□□□□□ -1.52
CLK1-204ENST00000432425 VPS37DQ86XT2 251 aa5.55□□□□□ -1.52
CLK1-204ENST00000432425 IRF2BP1Q8IU81 584 aa5.55□□□□□ -1.52
CLK1-204ENST00000432425 BRF1Q92994 677 aa5.55□□□□□ -1.52
CLK1-204ENST00000432425 HHIPL1Q96JK4 782 aa5.55□□□□□ -1.52
CLK1-204ENST00000432425 TNFRSF10DQ9UBN6 386 aa5.55□□□□□ -1.52
CLK1-204ENST00000432425 YBX2Q9Y2T7 364 aaKnown RBP5.55□□□□□ -1.52
CLK1-204ENST00000432425 SF3B6Q9Y3B4 125 aaKnown RBP5.55□□□□□ -1.52
CLK1-204ENST00000432425 ZNF451Q9Y4E5 1061 aa5.55□□□□□ -1.52
CLK1-204ENST00000432425 FHOD1Q9Y613 1164 aa5.55□□□□□ -1.52
CLK1-204ENST00000432425 H0Y8X5 98 aa5.54□□□□□ -1.52
CLK1-204ENST00000432425 NRDCO43847 1150 aa5.54□□□□□ -1.52
CLK1-204ENST00000432425 PDE6BP35913 854 aa5.54□□□□□ -1.52
CLK1-204ENST00000432425 ZNF445P59923 1031 aa5.54□□□□□ -1.52
CLK1-204ENST00000432425 SLC7A5Q01650 507 aa5.54□□□□□ -1.52
CLK1-204ENST00000432425 GNL2Q13823 731 aaKnown RBP5.54□□□□□ -1.52
CLK1-204ENST00000432425 HEATR6Q6AI08 1181 aaKnown RBP5.54□□□□□ -1.52
CLK1-204ENST00000432425 SYDE1Q6ZW31 735 aaPredicted RBP5.54□□□□□ -1.52
CLK1-204ENST00000432425 FIBCD1Q8N539 461 aa5.54□□□□□ -1.52
CLK1-204ENST00000432425 NAT16Q8N8M0 369 aa5.54□□□□□ -1.52
CLK1-204ENST00000432425 BHLHE22Q8NFJ8 381 aaPredicted RBP5.54□□□□□ -1.52
CLK1-204ENST00000432425 ANAPC16Q96DE5 110 aa5.54□□□□□ -1.52
CLK1-204ENST00000432425 INTS4Q96HW7 963 aaKnown RBP5.54□□□□□ -1.52
CLK1-204ENST00000432425 KRTAP4-11Q9BYQ6 195 aa5.54□□□□□ -1.52
CLK1-204ENST00000432425 GBP3Q9H0R5 595 aa5.54□□□□□ -1.52
CLK1-204ENST00000432425 PCDHB10Q9UN67 800 aa5.54□□□□□ -1.52
CLK1-204ENST00000432425 GPR55Q9Y2T6 319 aaPredicted RBP5.54□□□□□ -1.52
CLK1-204ENST00000432425 GSTM1P09488 218 aa5.53□□□□□ -1.52
CLK1-204ENST00000432425 ATF4P18848 351 aaPredicted RBP5.53□□□□□ -1.52
CLK1-204ENST00000432425 RTP1P59025 263 aa5.53□□□□□ -1.52
CLK1-204ENST00000432425 HAUS7Q99871 368 aa5.53□□□□□ -1.52
CLK1-204ENST00000432425 NOL6Q9H6R4 1146 aaKnown RBP5.53□□□□□ -1.52
CLK1-204ENST00000432425 AP5S1Q9NUS5 200 aa5.53□□□□□ -1.52
CLK1-204ENST00000432425 PODXL2Q9NZ53 605 aa5.53□□□□□ -1.52
CLK1-204ENST00000432425 TAF6LQ9Y6J9 622 aa5.53□□□□□ -1.52
CLK1-204ENST00000432425 FADS2P1A8MWK0 482 aa5.53□□□□□ -1.52
CLK1-204ENST00000432425 NOP2P46087 812 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms