RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 PPP1R13BQ96KQ4 1090 aa12.84□□□□□ -0.35
CLDN4-202ENST00000431918 RPN1P04843 607 aaKnown RBP12.83□□□□□ -0.36
CLDN4-202ENST00000431918 SPAG1Q07617 926 aa12.83□□□□□ -0.36
CLDN4-202ENST00000431918 SPATA1Q5VX52 437 aa12.83□□□□□ -0.36
CLDN4-202ENST00000431918 ZNF384Q8TF68 577 aa12.83□□□□□ -0.36
CLDN4-202ENST00000431918 LRRC4BQ9NT99 713 aa12.83□□□□□ -0.36
CLDN4-202ENST00000431918 CCDC175P0C221 793 aa12.83□□□□□ -0.36
CLDN4-202ENST00000431918 GYS1P13807 737 aa12.83□□□□□ -0.36
CLDN4-202ENST00000431918 SLC1A4P43007 532 aa12.83□□□□□ -0.36
CLDN4-202ENST00000431918 ADCY7P51828 1080 aa12.83□□□□□ -0.36
CLDN4-202ENST00000431918 KRT79Q5XKE5 535 aa12.83□□□□□ -0.36
CLDN4-202ENST00000431918 ENOX1Q8TC92 643 aaKnown RBP12.83□□□□□ -0.36
CLDN4-202ENST00000431918 VEZTQ9HBM0 779 aa12.83□□□□□ -0.36
CLDN4-202ENST00000431918 LRWD1Q9UFC0 647 aa12.83□□□□□ -0.36
CLDN4-202ENST00000431918 CTDP1Q9Y5B0 961 aaPredicted RBP12.83□□□□□ -0.36
CLDN4-202ENST00000431918 ATRNO75882 1429 aa12.83□□□□□ -0.36
CLDN4-202ENST00000431918 ARHGAP6O43182 974 aa12.83□□□□□ -0.36
CLDN4-202ENST00000431918 CCZ1BP86790 482 aa12.83□□□□□ -0.36
CLDN4-202ENST00000431918 CCZ1P86791 482 aaPredicted RBP12.83□□□□□ -0.36
CLDN4-202ENST00000431918 ZYXQ15942 572 aaKnown RBP12.83□□□□□ -0.36
CLDN4-202ENST00000431918 VSTM4Q8IW00 320 aa12.83□□□□□ -0.36
CLDN4-202ENST00000431918 TBCKQ8TEA7 893 aa12.83□□□□□ -0.36
CLDN4-202ENST00000431918 SECISBP2LQ93073 1101 aaKnown RBP12.83□□□□□ -0.36
CLDN4-202ENST00000431918 GSDMAQ96QA5 445 aa12.83□□□□□ -0.36
CLDN4-202ENST00000431918 SRRTQ9BXP5 876 aaKnown RBP12.83□□□□□ -0.36
CLDN4-202ENST00000431918 RNF216Q9NWF9 866 aaPredicted RBP12.83□□□□□ -0.36
CLDN4-202ENST00000431918 SERPINB13Q9UIV8 391 aa12.83□□□□□ -0.36
CLDN4-202ENST00000431918 USH1GQ495M9 461 aa12.82□□□□□ -0.36
CLDN4-202ENST00000431918 NEK8Q86SG6 692 aa12.82□□□□□ -0.36
CLDN4-202ENST00000431918 NLGN1Q8N2Q7 840 aa12.82□□□□□ -0.36
CLDN4-202ENST00000431918 CSGALNACT2Q8N6G5 542 aa12.82□□□□□ -0.36
CLDN4-202ENST00000431918 ZNF579Q8NAF0 562 aaKnown RBP12.82□□□□□ -0.36
CLDN4-202ENST00000431918 CAGE1Q8TC20 777 aa12.82□□□□□ -0.36
CLDN4-202ENST00000431918 GTPBP6O43824 516 aaPredicted RBP12.82□□□□□ -0.36
CLDN4-202ENST00000431918 OR52Z1P0C646 297 aa12.82□□□□□ -0.36
CLDN4-202ENST00000431918 MORC3Q14149 939 aa12.82□□□□□ -0.36
CLDN4-202ENST00000431918 CALCRLQ16602 461 aa12.82□□□□□ -0.36
CLDN4-202ENST00000431918 SBK1Q52WX2 424 aa12.82□□□□□ -0.36
CLDN4-202ENST00000431918 FKBP15Q5T1M5 1219 aa12.82□□□□□ -0.36
CLDN4-202ENST00000431918 C2CD5Q86YS7 1000 aa12.82□□□□□ -0.36
CLDN4-202ENST00000431918 BPIFA3Q9BQP9 254 aa12.82□□□□□ -0.36
CLDN4-202ENST00000431918 LZTS2Q9BRK4 669 aa12.82□□□□□ -0.36
CLDN4-202ENST00000431918 RASA1P20936 1047 aa12.82□□□□□ -0.36
CLDN4-202ENST00000431918 TRAPPC10P48553 1259 aa12.82□□□□□ -0.36
CLDN4-202ENST00000431918 SNX29Q8TEQ0 813 aa12.82□□□□□ -0.36
CLDN4-202ENST00000431918 POLLQ9UGP5 575 aa12.82□□□□□ -0.36
CLDN4-202ENST00000431918 COL14A1Q05707 1796 aaKnown RBP12.82□□□□□ -0.36
CLDN4-202ENST00000431918 ADAMTS7Q9UKP4 1686 aa12.82□□□□□ -0.36
CLDN4-202ENST00000431918 H0YIN7 160 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 TEX33O43247 280 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 ALDH1B1P30837 517 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 KRT9P35527 623 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 CARD6Q9BX69 1037 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 TMEM260Q9NX78 707 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 TBC1D7Q9P0N9 293 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.81□□□□□ -0.36
CLDN4-202ENST00000431918 WNT7AO00755 349 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 LONP1P36776 959 aaKnown RBP12.81□□□□□ -0.36
CLDN4-202ENST00000431918 NCAPHQ15003 741 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 UBE2SQ16763 222 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 TUBGCP6Q96RT7 1819 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 FLT1P17948 1338 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 ADRA2BP18089 450 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 GRM4Q14833 912 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 ZNF569Q5MCW4 686 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 FCHSD1Q86WN1 690 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 OSBPL5Q9H0X9 879 aaPredicted RBP12.81□□□□□ -0.36
CLDN4-202ENST00000431918 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.81□□□□□ -0.36
CLDN4-202ENST00000431918 PPP2R2CQ9Y2T4 447 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 KCNJ18B7U540 433 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 ACTN4O43707 911 aaKnown RBP12.81□□□□□ -0.36
CLDN4-202ENST00000431918 AKR1B1P15121 316 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 ERCC5P28715 1186 aaPredicted RBP12.81□□□□□ -0.36
CLDN4-202ENST00000431918 MRPL12P52815 198 aaKnown RBP12.81□□□□□ -0.36
CLDN4-202ENST00000431918 ATP2C1P98194 919 aaPredicted RBP12.81□□□□□ -0.36
CLDN4-202ENST00000431918 KCNJ12Q14500 433 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 SV2BQ7L1I2 683 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 IL17RBQ9NRM6 502 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 TCEAL9Q9UHQ7 104 aa12.81□□□□□ -0.36
CLDN4-202ENST00000431918 TRIM49BA6NDI0 452 aa12.8□□□□□ -0.36
CLDN4-202ENST00000431918 GDF11O95390 407 aa12.8□□□□□ -0.36
CLDN4-202ENST00000431918 CASP14P31944 242 aa12.8□□□□□ -0.36
CLDN4-202ENST00000431918 DNA2P51530 1060 aa12.8□□□□□ -0.36
CLDN4-202ENST00000431918 ERCC6LQ2NKX8 1250 aa12.8□□□□□ -0.36
CLDN4-202ENST00000431918 CCDC40Q4G0X9 1142 aa12.8□□□□□ -0.36
CLDN4-202ENST00000431918 MMRN2Q9H8L6 949 aa12.8□□□□□ -0.36
CLDN4-202ENST00000431918 PUF60Q9UHX1 559 aaKnown RBP12.8□□□□□ -0.36
CLDN4-202ENST00000431918 GUCA1BQ9UMX6 200 aa12.8□□□□□ -0.36
CLDN4-202ENST00000431918 DAGLAQ9Y4D2 1042 aa12.8□□□□□ -0.36
CLDN4-202ENST00000431918 SNAP25P60880 206 aa12.8□□□□□ -0.36
CLDN4-202ENST00000431918 ETF1P62495 437 aaKnown RBP12.8□□□□□ -0.36
CLDN4-202ENST00000431918 CACNA2D4Q7Z3S7 1137 aa12.8□□□□□ -0.36
CLDN4-202ENST00000431918 CCDC43Q96MW1 224 aaKnown RBP12.8□□□□□ -0.36
CLDN4-202ENST00000431918 SLC39A2Q9NP94 309 aa12.8□□□□□ -0.36
CLDN4-202ENST00000431918 GOLGA6L9A6NEM1 432 aa12.8□□□□□ -0.36
CLDN4-202ENST00000431918 PDE6BP35913 854 aa12.8□□□□□ -0.36
CLDN4-202ENST00000431918 TBC1D8BQ0IIM8 1120 aa12.8□□□□□ -0.36
CLDN4-202ENST00000431918 SPICE1Q8N0Z3 855 aa12.8□□□□□ -0.36
CLDN4-202ENST00000431918 TMEM60Q9H2L4 133 aa12.8□□□□□ -0.36
CLDN4-202ENST00000431918 PLCG1P19174 1290 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms