RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 PES1O00541 588 aaKnown RBP12.89□□□□□ -0.35
SMPD4-205ENST00000431183 TXKP42681 527 aa12.89□□□□□ -0.35
SMPD4-205ENST00000431183 PTGDRQ13258 359 aa12.89□□□□□ -0.35
SMPD4-205ENST00000431183 WRNIP1Q96S55 665 aa12.89□□□□□ -0.35
SMPD4-205ENST00000431183 LMOD1P29536 600 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-205ENST00000431183 SPP2Q13103 211 aa12.89□□□□□ -0.35
SMPD4-205ENST00000431183 LINC00301Q8NCQ3 95 aa12.89□□□□□ -0.35
SMPD4-205ENST00000431183 CNNM3Q8NE01 707 aa12.89□□□□□ -0.35
SMPD4-205ENST00000431183 NOL7Q9UMY1 257 aaKnown RBP12.89□□□□□ -0.35
SMPD4-205ENST00000431183 PCDHA1Q9Y5I3 950 aa12.89□□□□□ -0.35
SMPD4-205ENST00000431183 DDAH1O94760 285 aa12.89□□□□□ -0.35
SMPD4-205ENST00000431183 ADGRF4Q8IZF3 695 aa12.89□□□□□ -0.35
SMPD4-205ENST00000431183 SHISA4Q96DD7 197 aa12.89□□□□□ -0.35
SMPD4-205ENST00000431183 RNF26Q9BY78 433 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-205ENST00000431183 CNTNAP5Q8WYK1 1306 aa12.88□□□□□ -0.35
SMPD4-205ENST00000431183 PNOCQ13519 176 aa12.88□□□□□ -0.35
SMPD4-205ENST00000431183 TTC38Q5R3I4 469 aa12.88□□□□□ -0.35
SMPD4-205ENST00000431183 BLIDQ8IZY5 108 aa12.88□□□□□ -0.35
SMPD4-205ENST00000431183 BLZF1Q9H2G9 400 aa12.88□□□□□ -0.35
SMPD4-205ENST00000431183 A0A1W2PRG0 241 aa12.88□□□□□ -0.35
SMPD4-205ENST00000431183 PFKFB1P16118 471 aa12.88□□□□□ -0.35
SMPD4-205ENST00000431183 ZNF76P36508 570 aa12.88□□□□□ -0.35
SMPD4-205ENST00000431183 SLC35G1Q2M3R5 365 aa12.88□□□□□ -0.35
SMPD4-205ENST00000431183 BCORQ6W2J9 1755 aa12.88□□□□□ -0.35
SMPD4-205ENST00000431183 NDUFB10O96000 172 aa12.88□□□□□ -0.35
SMPD4-205ENST00000431183 VIL1P09327 827 aaKnown RBP12.88□□□□□ -0.35
SMPD4-205ENST00000431183 FAM163AQ96GL9 167 aaPredicted RBP12.87□□□□□ -0.35
SMPD4-205ENST00000431183 KANSL2Q9H9L4 492 aa12.87□□□□□ -0.35
SMPD4-205ENST00000431183 ADM5C9JUS6 153 aa12.87□□□□□ -0.35
SMPD4-205ENST00000431183 DDX39AO00148 427 aaKnown RBP12.87□□□□□ -0.35
SMPD4-205ENST00000431183 LRSAM1Q6UWE0 723 aa12.87□□□□□ -0.35
SMPD4-205ENST00000431183 BRAPQ7Z569 592 aa12.87□□□□□ -0.35
SMPD4-205ENST00000431183 PSMD1Q99460 953 aa12.87□□□□□ -0.35
SMPD4-205ENST00000431183 CSRNP2Q9H175 543 aa12.87□□□□□ -0.35
SMPD4-205ENST00000431183 DHX36Q9H2U1 1008 aaKnown RBP12.87□□□□□ -0.35
SMPD4-205ENST00000431183 ZHX2Q9Y6X8 837 aa12.87□□□□□ -0.35
SMPD4-205ENST00000431183 LAMB2P55268 1798 aa12.87□□□□□ -0.35
SMPD4-205ENST00000431183 PRPF3O43395 683 aaKnown RBP12.87□□□□□ -0.35
SMPD4-205ENST00000431183 CHMP2AO43633 222 aa12.87□□□□□ -0.35
SMPD4-205ENST00000431183 ZNF202O95125 648 aa12.87□□□□□ -0.35
SMPD4-205ENST00000431183 CCDC192P0DO97 292 aa12.87□□□□□ -0.35
SMPD4-205ENST00000431183 YBX3P16989 372 aaKnown RBP eCLIP12.87□□□□□ -0.355e-7■□□□□ 9.7
SMPD4-205ENST00000431183 GNAQP50148 359 aa12.87□□□□□ -0.35
SMPD4-205ENST00000431183 TOB1P50616 345 aaPredicted RBP12.87□□□□□ -0.35
SMPD4-205ENST00000431183 STX17P56962 302 aa12.87□□□□□ -0.35
SMPD4-205ENST00000431183 JMYQ8N9B5 988 aa12.87□□□□□ -0.35
SMPD4-205ENST00000431183 IL17RAQ96F46 866 aa12.87□□□□□ -0.35
SMPD4-205ENST00000431183 GOLGA6L19H0YKK7 550 aa12.86□□□□□ -0.35
SMPD4-205ENST00000431183 KCNG4Q8TDN1 519 aa12.86□□□□□ -0.35
SMPD4-205ENST00000431183 CNKSR2Q8WXI2 1034 aa12.86□□□□□ -0.35
SMPD4-205ENST00000431183 BBXQ8WY36 941 aaPredicted RBP12.86□□□□□ -0.35
SMPD4-205ENST00000431183 MAP7D2Q96T17 732 aa12.86□□□□□ -0.35
SMPD4-205ENST00000431183 BMP2KQ9NSY1 1161 aaPredicted RBP12.86□□□□□ -0.35
SMPD4-205ENST00000431183 FLOT1O75955 427 aa12.86□□□□□ -0.35
SMPD4-205ENST00000431183 TECP42680 631 aa12.86□□□□□ -0.35
SMPD4-205ENST00000431183 EVCP57679 992 aa12.86□□□□□ -0.35
SMPD4-205ENST00000431183 TYRO3Q06418 890 aa12.86□□□□□ -0.35
SMPD4-205ENST00000431183 NSMFQ6X4W1 530 aa12.86□□□□□ -0.35
SMPD4-205ENST00000431183 SMYD4Q8IYR2 804 aaPredicted RBP12.86□□□□□ -0.35
SMPD4-205ENST00000431183 TBC1D5Q92609 795 aa12.86□□□□□ -0.35
SMPD4-205ENST00000431183 ZBTB21Q9ULJ3 1066 aa12.86□□□□□ -0.35
SMPD4-205ENST00000431183 PDS5AQ29RF7 1337 aaKnown RBP12.86□□□□□ -0.35
SMPD4-205ENST00000431183 GRM4Q14833 912 aa12.86□□□□□ -0.35
SMPD4-205ENST00000431183 TBCKQ8TEA7 893 aa12.86□□□□□ -0.35
SMPD4-205ENST00000431183 ALAS1P13196 640 aa12.85□□□□□ -0.35
SMPD4-205ENST00000431183 MTMR2Q13614 643 aa12.85□□□□□ -0.35
SMPD4-205ENST00000431183 CDC37Q16543 378 aaPredicted RBP12.85□□□□□ -0.35
SMPD4-205ENST00000431183 PFKFB3Q16875 520 aaPredicted RBP12.85□□□□□ -0.35
SMPD4-205ENST00000431183 QRICH1Q2TAL8 776 aa12.85□□□□□ -0.35
SMPD4-205ENST00000431183 FOXP4Q8IVH2 680 aaPredicted RBP12.85□□□□□ -0.35
SMPD4-205ENST00000431183 REXO1Q8N1G1 1221 aaKnown RBP12.85□□□□□ -0.35
SMPD4-205ENST00000431183 KRI1Q8N9T8 703 aaKnown RBP12.85□□□□□ -0.35
SMPD4-205ENST00000431183 TRIM5Q9C035 493 aa12.85□□□□□ -0.35
SMPD4-205ENST00000431183 C6orf50Q9HD87 102 aa12.85□□□□□ -0.35
SMPD4-205ENST00000431183 RTEL1Q9NZ71 1219 aa12.85□□□□□ -0.35
SMPD4-205ENST00000431183 SERTAD1Q9UHV2 236 aa12.85□□□□□ -0.35
SMPD4-205ENST00000431183 CD2APQ9Y5K6 639 aa12.85□□□□□ -0.35
SMPD4-205ENST00000431183 ZNF165P49910 485 aa12.85□□□□□ -0.35
SMPD4-205ENST00000431183 CHMP4BP1P59074 171 aa12.85□□□□□ -0.35
SMPD4-205ENST00000431183 PSTPIP2Q9H939 334 aa12.85□□□□□ -0.35
SMPD4-205ENST00000431183 ARHGEF10LQ9HCE6 1279 aa12.85□□□□□ -0.35
SMPD4-205ENST00000431183 KCNH3Q9ULD8 1083 aa12.85□□□□□ -0.35
SMPD4-205ENST00000431183 SUGT1Q9Y2Z0 365 aa12.85□□□□□ -0.35
SMPD4-205ENST00000431183 BMP3P12645 472 aa12.85□□□□□ -0.35
SMPD4-205ENST00000431183 HMGCS2P54868 508 aa12.85□□□□□ -0.35
SMPD4-205ENST00000431183 KARSQ15046 597 aaKnown RBP12.85□□□□□ -0.35
SMPD4-205ENST00000431183 LONRF3Q496Y0 759 aa12.85□□□□□ -0.35
SMPD4-205ENST00000431183 PPP1R9BQ96SB3 815 aa12.85□□□□□ -0.35
SMPD4-205ENST00000431183 SWAP70Q9UH65 585 aa12.85□□□□□ -0.35
SMPD4-205ENST00000431183 RCOR1Q9UKL0 485 aa12.85□□□□□ -0.35
SMPD4-205ENST00000431183 TUBGCP6Q96RT7 1819 aa12.84□□□□□ -0.35
SMPD4-205ENST00000431183 GPIHBP1Q8IV16 184 aa12.84□□□□□ -0.35
SMPD4-205ENST00000431183 SULF1Q8IWU6 871 aa12.84□□□□□ -0.35
SMPD4-205ENST00000431183 JMJD4Q9H9V9 463 aa12.84□□□□□ -0.35
SMPD4-205ENST00000431183 PICK1Q9NRD5 415 aa12.84□□□□□ -0.35
SMPD4-205ENST00000431183 TDP2O95551 362 aa12.84□□□□□ -0.35
SMPD4-205ENST00000431183 LMNB1P20700 586 aa12.84□□□□□ -0.35
SMPD4-205ENST00000431183 RILPL1Q5EBL4 403 aa12.84□□□□□ -0.35
SMPD4-205ENST00000431183 TMEM179Q6ZVK1 233 aa12.84□□□□□ -0.35
SMPD4-205ENST00000431183 PAXIP1Q6ZW49 1069 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms