RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 MCM5P33992 734 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 CBX3Q13185 183 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 MTMR3Q13615 1198 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 ITGA7Q13683 1181 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 CCDC122Q5T0U0 273 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 TMEM53Q6P2H8 277 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 CORO6Q6QEF8 472 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 MAELQ96JY0 434 aaKnown RBP5.94□□□□□ -1.46
PTPN4-203ENST00000430976 PPP1R36Q96LQ0 422 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 IRX2Q9BZI1 471 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-203ENST00000430976 AFF4Q9UHB7 1163 aaKnown RBP5.94□□□□□ -1.46
PTPN4-203ENST00000430976 CAPN11Q9UMQ6 739 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 WDR37Q9Y2I8 494 aa5.94□□□□□ -1.46
PTPN4-203ENST00000430976 GNAT3A8MTJ3 354 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 GNPATO15228 680 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 CASTP20810 708 aaKnown RBP5.93□□□□□ -1.46
PTPN4-203ENST00000430976 PMS2P54278 862 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 PCSK7Q16549 785 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 SLC44A4Q53GD3 710 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 MCTP1Q6DN14 999 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 CCDC170Q8IYT3 715 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 LINC00469Q8N7U9 141 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 DNAJB8Q8NHS0 232 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 JAKMIP1Q96N16 626 aaKnown RBP5.93□□□□□ -1.46
PTPN4-203ENST00000430976 FAM126AQ9BYI3 521 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-203ENST00000430976 ARNT2Q9HBZ2 717 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 CCDC169A6NNP5 214 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 COBLO75128 1261 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 PNMA6AP0CW24 399 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-203ENST00000430976 NCAM1P13591 858 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 GRK2P25098 689 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 MLH1P40692 756 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 SEC13P55735 322 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 POLE2P56282 527 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 NLRP12P59046 1061 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 KLHL30Q0D2K2 578 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 RTL10Q7L3V2 364 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 BRSK1Q8TDC3 778 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 SNX6Q9UNH7 406 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 PCDHGB3Q9Y5G1 929 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 K7ELQ4 463 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-203ENST00000430976 ALDH1L1O75891 902 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 URI1O94763 535 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-203ENST00000430976 SSBP05455 408 aaKnown RBP eCLIP5.93□□□□□ -1.46
PTPN4-203ENST00000430976 SRGNP10124 158 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 MYBL1P10243 752 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 TMEM11P17152 192 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 ALAS2P22557 587 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 RENBPP51606 427 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 CD83Q01151 205 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 KLC1Q07866 573 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 G3BP1Q13283 466 aaKnown RBP eCLIP5.93□□□□□ -1.46
PTPN4-203ENST00000430976 SEPT6Q14141 434 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 NBPF14Q5TI25 921 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 SH3TC2Q8TF17 1288 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 SGCDQ92629 289 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 CASP10Q92851 521 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 CNKSR1Q969H4 720 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 NCLNQ969V3 563 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 PGBD4Q96DM1 585 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 TESK2Q96S53 571 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 UTP14AQ9BVJ6 771 aaKnown RBP5.93□□□□□ -1.46
PTPN4-203ENST00000430976 TRIM8Q9BZR9 551 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 EXOC7Q9UPT5 735 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 JAG2Q9Y219 1238 aa5.93□□□□□ -1.46
PTPN4-203ENST00000430976 F5H423 210 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-203ENST00000430976 PRPF3O43395 683 aaKnown RBP5.92□□□□□ -1.46
PTPN4-203ENST00000430976 EFR3AQ14156 821 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 CFAP161Q6P656 301 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 MILR1Q7Z6M3 343 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 KRT77Q7Z794 578 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 TADA2BQ86TJ2 420 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 IFNL1Q8IU54 200 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 CNDP2Q96KP4 475 aaKnown RBP5.92□□□□□ -1.46
PTPN4-203ENST00000430976 ADNPQ9H2P0 1102 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 KANSL2Q9H9L4 492 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 HACD3Q9P035 362 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 AKAP7Q9P0M2 348 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-203ENST00000430976 FAM184BQ9ULE4 1060 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 MAP3K13O43283 966 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 SIN3BO75182 1162 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 CLTAP09496 248 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 C6orf183Q5T699 404 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 ELMSAN1Q6PJG2 1045 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 ITPRIPQ8IWB1 547 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 SLC7A3Q8WY07 619 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 CUL5Q93034 780 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 RILPL2Q969X0 211 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 RPGRIP1Q96KN7 1286 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 ALPK1Q96QP1 1244 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 PIH1D1Q9NWS0 290 aaKnown RBP5.92□□□□□ -1.46
PTPN4-203ENST00000430976 GTF2A1LQ9UNN4 478 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 TARSL2A2RTX5 802 aaKnown RBP5.92□□□□□ -1.46
PTPN4-203ENST00000430976 SPECC1L-ADORA2AF8WAN1 911 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 RASGRP1O95267 797 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 PRKACAP17612 351 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 YY1P25490 414 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 MAPK1P28482 360 aa5.92□□□□□ -1.46
PTPN4-203ENST00000430976 PBLDP30039 288 aaPredicted RBP5.92□□□□□ -1.46
PTPN4-203ENST00000430976 CASP2P42575 452 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms