RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 CHRDL2Q6WN34 429 aa10.79□□□□□ -0.68
HDAC9-211ENST00000430454 CHST13Q8NET6 341 aa10.79□□□□□ -0.68
HDAC9-211ENST00000430454 NPLOC4Q8TAT6 608 aa10.79□□□□□ -0.68
HDAC9-211ENST00000430454 MAML3Q96JK9 1138 aa10.79□□□□□ -0.68
HDAC9-211ENST00000430454 OSBPL3Q9H4L5 887 aa10.79□□□□□ -0.68
HDAC9-211ENST00000430454 FBXO28Q9NVF7 368 aa10.79□□□□□ -0.68
HDAC9-211ENST00000430454 FLRT1Q9NZU1 646 aa10.79□□□□□ -0.68
HDAC9-211ENST00000430454 ZNF214Q9UL59 606 aaPredicted RBP10.79□□□□□ -0.68
HDAC9-211ENST00000430454 ZMYM6O95789 1325 aa10.79□□□□□ -0.68
HDAC9-211ENST00000430454 PLXNB2O15031 1838 aa10.79□□□□□ -0.68
HDAC9-211ENST00000430454 ZNF236Q9UL36 1845 aa10.79□□□□□ -0.68
HDAC9-211ENST00000430454 PLA2G6O60733 806 aa10.78□□□□□ -0.68
HDAC9-211ENST00000430454 COBLO75128 1261 aa10.78□□□□□ -0.68
HDAC9-211ENST00000430454 CYBAP13498 195 aa10.78□□□□□ -0.68
HDAC9-211ENST00000430454 SLC4A3P48751 1232 aa10.78□□□□□ -0.68
HDAC9-211ENST00000430454 TKFCQ3LXA3 575 aa10.78□□□□□ -0.68
HDAC9-211ENST00000430454 RCSD1Q6JBY9 416 aa10.78□□□□□ -0.68
HDAC9-211ENST00000430454 CCDC129Q6ZRS4 1044 aa10.78□□□□□ -0.68
HDAC9-211ENST00000430454 MFSD6Q6ZSS7 791 aa10.78□□□□□ -0.68
HDAC9-211ENST00000430454 C7orf61Q8IZ16 206 aa10.78□□□□□ -0.68
HDAC9-211ENST00000430454 CPXCR1Q8N123 301 aa10.78□□□□□ -0.68
HDAC9-211ENST00000430454 LRRC47Q8N1G4 583 aaKnown RBP10.78□□□□□ -0.68
HDAC9-211ENST00000430454 ANKRD35Q8N283 1001 aa10.78□□□□□ -0.68
HDAC9-211ENST00000430454 EXOC6Q8TAG9 804 aa10.78□□□□□ -0.68
HDAC9-211ENST00000430454 DIS3LQ8TF46 1054 aaKnown RBP10.78□□□□□ -0.68
HDAC9-211ENST00000430454 DCAF4Q8WV16 495 aa10.78□□□□□ -0.68
HDAC9-211ENST00000430454 STAG1Q8WVM7 1258 aa10.78□□□□□ -0.68
HDAC9-211ENST00000430454 NUP88Q99567 741 aaPredicted RBP10.78□□□□□ -0.68
HDAC9-211ENST00000430454 TINF2Q9BSI4 451 aa10.78□□□□□ -0.68
HDAC9-211ENST00000430454 SLC38A10Q9HBR0 1119 aa10.78□□□□□ -0.68
HDAC9-211ENST00000430454 PRKAG2Q9UGJ0 569 aa10.78□□□□□ -0.68
HDAC9-211ENST00000430454 CTNNA3Q9UI47 895 aa10.78□□□□□ -0.68
HDAC9-211ENST00000430454 CCDC171Q6TFL3 1326 aa10.78□□□□□ -0.68
HDAC9-211ENST00000430454 A0A0G2JMZ2 1700 aa10.78□□□□□ -0.68
HDAC9-211ENST00000430454 TMEM232C9JQI7 657 aa10.77□□□□□ -0.69
HDAC9-211ENST00000430454 ZNF213O14771 459 aa10.77□□□□□ -0.69
HDAC9-211ENST00000430454 FGAP02671 866 aa10.77□□□□□ -0.69
HDAC9-211ENST00000430454 RARBP10826 455 aa10.77□□□□□ -0.69
HDAC9-211ENST00000430454 SDSP20132 328 aa10.77□□□□□ -0.69
HDAC9-211ENST00000430454 CTDSPL2Q05D32 466 aa10.77□□□□□ -0.69
HDAC9-211ENST00000430454 NMIQ13287 307 aaPredicted RBP10.77□□□□□ -0.69
HDAC9-211ENST00000430454 ZNF792Q3KQV3 632 aa10.77□□□□□ -0.69
HDAC9-211ENST00000430454 RRP12Q5JTH9 1297 aaKnown RBP10.77□□□□□ -0.69
HDAC9-211ENST00000430454 ZNF467Q7Z7K2 595 aaPredicted RBP10.77□□□□□ -0.69
HDAC9-211ENST00000430454 RNF180Q86T96 592 aa10.77□□□□□ -0.69
HDAC9-211ENST00000430454 TTC14Q96N46 770 aa10.77□□□□□ -0.69
HDAC9-211ENST00000430454 TCP11L1Q9NUJ3 509 aa10.77□□□□□ -0.69
HDAC9-211ENST00000430454 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.77□□□□□ -0.69
HDAC9-211ENST00000430454 CEP290O15078 2479 aa10.77□□□□□ -0.69
HDAC9-211ENST00000430454 A0A0D9SFI3 127 aa10.76□□□□□ -0.69
HDAC9-211ENST00000430454 FGRP09769 529 aa10.76□□□□□ -0.69
HDAC9-211ENST00000430454 HSPD1P10809 573 aaKnown RBP10.76□□□□□ -0.69
HDAC9-211ENST00000430454 TOP1P11387 765 aaKnown RBP10.76□□□□□ -0.69
HDAC9-211ENST00000430454 COL6A1P12109 1028 aa10.76□□□□□ -0.69
HDAC9-211ENST00000430454 AKR1A1P14550 325 aa10.76□□□□□ -0.69
HDAC9-211ENST00000430454 MCCP23508 829 aa10.76□□□□□ -0.69
HDAC9-211ENST00000430454 PLEKHM2Q8IWE5 1019 aa10.76□□□□□ -0.69
HDAC9-211ENST00000430454 REPS2Q8NFH8 660 aa10.76□□□□□ -0.69
HDAC9-211ENST00000430454 ESR2Q92731 530 aa10.76□□□□□ -0.69
HDAC9-211ENST00000430454 FAM227BQ96M60 508 aa10.76□□□□□ -0.69
HDAC9-211ENST00000430454 LBHD1Q9BQE6 289 aaPredicted RBP10.76□□□□□ -0.69
HDAC9-211ENST00000430454 SENP6Q9GZR1 1112 aaPredicted RBP10.76□□□□□ -0.69
HDAC9-211ENST00000430454 ACAD9Q9H845 621 aa10.76□□□□□ -0.69
HDAC9-211ENST00000430454 SPC25Q9HBM1 224 aa10.76□□□□□ -0.69
HDAC9-211ENST00000430454 SUPT16HQ9Y5B9 1047 aaKnown RBP10.76□□□□□ -0.69
HDAC9-211ENST00000430454 SYNGAP1Q96PV0 1343 aa10.76□□□□□ -0.69
HDAC9-211ENST00000430454 IGHA2P01877 340 aa10.75□□□□□ -0.69
HDAC9-211ENST00000430454 IGHDP01880 384 aa10.75□□□□□ -0.69
HDAC9-211ENST00000430454 MYCNP04198 464 aaPredicted RBP10.75□□□□□ -0.69
HDAC9-211ENST00000430454 PGK2P07205 417 aa10.75□□□□□ -0.69
HDAC9-211ENST00000430454 BMP8BP34820 402 aa10.75□□□□□ -0.69
HDAC9-211ENST00000430454 MNX1P50219 401 aaPredicted RBP10.75□□□□□ -0.69
HDAC9-211ENST00000430454 IMMTQ16891 758 aaKnown RBP10.75□□□□□ -0.69
HDAC9-211ENST00000430454 CCDC96Q2M329 555 aa10.75□□□□□ -0.69
HDAC9-211ENST00000430454 AKNAD1Q5T1N1 836 aa10.75□□□□□ -0.69
HDAC9-211ENST00000430454 VPS53Q5VIR6 699 aa10.75□□□□□ -0.69
HDAC9-211ENST00000430454 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.75□□□□□ -0.69
HDAC9-211ENST00000430454 IQCA1Q86XH1 822 aa10.75□□□□□ -0.69
HDAC9-211ENST00000430454 RUFY2Q8WXA3 655 aa10.75□□□□□ -0.69
HDAC9-211ENST00000430454 MPHOSPH6Q99547 160 aaKnown RBP10.75□□□□□ -0.69
HDAC9-211ENST00000430454 RAVER2Q9HCJ3 691 aaKnown RBP10.75□□□□□ -0.69
HDAC9-211ENST00000430454 XPNPEP3Q9NQH7 507 aa10.75□□□□□ -0.69
HDAC9-211ENST00000430454 RBM27Q9P2N5 1060 aaKnown RBP10.75□□□□□ -0.69
HDAC9-211ENST00000430454 FAM184BQ9ULE4 1060 aa10.75□□□□□ -0.69
HDAC9-211ENST00000430454 GREB1LQ9C091 1923 aaPredicted RBP10.75□□□□□ -0.69
HDAC9-211ENST00000430454 PFASO15067 1338 aa10.75□□□□□ -0.69
HDAC9-211ENST00000430454 RLFQ13129 1914 aa10.74□□□□□ -0.69
HDAC9-211ENST00000430454 TPRNQ4KMQ1 711 aa10.74□□□□□ -0.69
HDAC9-211ENST00000430454 CWC27Q6UX04 472 aaKnown RBP10.74□□□□□ -0.69
HDAC9-211ENST00000430454 MAMDC4Q6UXC1 1216 aa10.74□□□□□ -0.69
HDAC9-211ENST00000430454 TRPV1Q8NER1 839 aa10.74□□□□□ -0.69
HDAC9-211ENST00000430454 ABHD16BQ9H3Z7 469 aa10.74□□□□□ -0.69
HDAC9-211ENST00000430454 CNNM2Q9H8M5 875 aa10.74□□□□□ -0.69
HDAC9-211ENST00000430454 ZMYND8Q9ULU4 1186 aaPredicted RBP10.74□□□□□ -0.69
HDAC9-211ENST00000430454 ASB14A6NK59 587 aa10.73□□□□□ -0.69
HDAC9-211ENST00000430454 B4DLN1 442 aa10.73□□□□□ -0.69
HDAC9-211ENST00000430454 POTEB2H3BUK9 544 aa10.73□□□□□ -0.69
HDAC9-211ENST00000430454 TULP1O00294 542 aaPredicted RBP10.73□□□□□ -0.69
HDAC9-211ENST00000430454 FOXP2O15409 715 aa10.73□□□□□ -0.69
HDAC9-211ENST00000430454 NOVP48745 357 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms