RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 MROH8Q9H579 483 aa20.08■□□□□ 0.8
UBE3D-204ENST00000430071 ZNF287Q9HBT7 754 aa20.08■□□□□ 0.8
UBE3D-204ENST00000430071 PFASO15067 1338 aa20.07■□□□□ 0.8
UBE3D-204ENST00000430071 PGK2P07205 417 aa20.07■□□□□ 0.8
UBE3D-204ENST00000430071 HAND2P61296 217 aa20.07■□□□□ 0.8
UBE3D-204ENST00000430071 NECAB2Q7Z6G3 386 aa20.07■□□□□ 0.8
UBE3D-204ENST00000430071 IL25Q9H293 177 aa20.07■□□□□ 0.8
UBE3D-204ENST00000430071 ANAPC4Q9UJX5 808 aa20.07■□□□□ 0.8
UBE3D-204ENST00000430071 LCTP09848 1927 aa20.06■□□□□ 0.8
UBE3D-204ENST00000430071 CCDC171Q6TFL3 1326 aa20.06■□□□□ 0.8
UBE3D-204ENST00000430071 CYBAP13498 195 aa20.06■□□□□ 0.8
UBE3D-204ENST00000430071 SLC4A3P48751 1232 aa20.06■□□□□ 0.8
UBE3D-204ENST00000430071 ANO1Q5XXA6 986 aa20.06■□□□□ 0.8
UBE3D-204ENST00000430071 SLFN13Q68D06 897 aa20.06■□□□□ 0.8
UBE3D-204ENST00000430071 ANKLE1Q8NAG6 615 aa20.06■□□□□ 0.8
UBE3D-204ENST00000430071 KIFC2Q96AC6 838 aa20.06■□□□□ 0.8
UBE3D-204ENST00000430071 TSPY2A6NKD2 308 aa20.05■□□□□ 0.8
UBE3D-204ENST00000430071 RANBP6O60518 1105 aaKnown RBP20.05■□□□□ 0.8
UBE3D-204ENST00000430071 SLC25A27O95847 323 aa20.05■□□□□ 0.8
UBE3D-204ENST00000430071 SLC3A2P08195 630 aaKnown RBP20.05■□□□□ 0.8
UBE3D-204ENST00000430071 FGRP09769 529 aa20.05■□□□□ 0.8
UBE3D-204ENST00000430071 FCER1AP12319 257 aa20.05■□□□□ 0.8
UBE3D-204ENST00000430071 CNGA1P29973 690 aa20.05■□□□□ 0.8
UBE3D-204ENST00000430071 CPXCR1Q8N123 301 aa20.05■□□□□ 0.8
UBE3D-204ENST00000430071 GMCL1P1Q8NEA9 526 aa20.05■□□□□ 0.8
UBE3D-204ENST00000430071 MAML3Q96JK9 1138 aa20.05■□□□□ 0.8
UBE3D-204ENST00000430071 MMP19Q99542 508 aa20.05■□□□□ 0.8
UBE3D-204ENST00000430071 RAVER2Q9HCJ3 691 aaKnown RBP20.05■□□□□ 0.8
UBE3D-204ENST00000430071 MCCP23508 829 aa20.04■□□□□ 0.8
UBE3D-204ENST00000430071 RRP12Q5JTH9 1297 aaKnown RBP20.04■□□□□ 0.8
UBE3D-204ENST00000430071 OLFML2BQ68BL8 750 aa20.04■□□□□ 0.8
UBE3D-204ENST00000430071 SNRNP48Q6IEG0 339 aaKnown RBP20.04■□□□□ 0.8
UBE3D-204ENST00000430071 CHRDL2Q6WN34 429 aa20.04■□□□□ 0.8
UBE3D-204ENST00000430071 PRPF38AQ8NAV1 312 aaKnown RBP20.04■□□□□ 0.8
UBE3D-204ENST00000430071 MTMR7Q9Y216 660 aa20.04■□□□□ 0.8
UBE3D-204ENST00000430071 MYH6P13533 1939 aa20.03■□□□□ 0.8
UBE3D-204ENST00000430071 TMEM232C9JQI7 657 aa20.03■□□□□ 0.8
UBE3D-204ENST00000430071 ORC4O43929 436 aa20.03■□□□□ 0.8
UBE3D-204ENST00000430071 EVI5O60447 810 aa20.03■□□□□ 0.8
UBE3D-204ENST00000430071 SNAP25P60880 206 aa20.03■□□□□ 0.8
UBE3D-204ENST00000430071 TBC1D10CQ8IV04 446 aa20.03■□□□□ 0.8
UBE3D-204ENST00000430071 ABRAQ8N0Z2 381 aa20.03■□□□□ 0.8
UBE3D-204ENST00000430071 C11orf49Q9H6J7 331 aa20.03■□□□□ 0.8
UBE3D-204ENST00000430071 DDX20Q9UHI6 824 aaKnown RBP20.03■□□□□ 0.8
UBE3D-204ENST00000430071 STX8Q9UNK0 236 aa20.03■□□□□ 0.8
UBE3D-204ENST00000430071 COL6A1P12109 1028 aa20.02■□□□□ 0.8
UBE3D-204ENST00000430071 BMP3P12645 472 aa20.02■□□□□ 0.8
UBE3D-204ENST00000430071 TAL1P17542 331 aaPredicted RBP20.02■□□□□ 0.8
UBE3D-204ENST00000430071 CAPN2P17655 700 aa20.02■□□□□ 0.8
UBE3D-204ENST00000430071 ZNF792Q3KQV3 632 aa20.02■□□□□ 0.8
UBE3D-204ENST00000430071 KCTD1Q719H9 257 aa20.02■□□□□ 0.8
UBE3D-204ENST00000430071 SLC38A10Q9HBR0 1119 aa20.02■□□□□ 0.8
UBE3D-204ENST00000430071 TOMM22Q9NS69 142 aa20.02■□□□□ 0.8
UBE3D-204ENST00000430071 FEM1BQ9UK73 627 aa20.02■□□□□ 0.8
UBE3D-204ENST00000430071 NOVP48745 357 aa20.01■□□□□ 0.79
UBE3D-204ENST00000430071 C7orf61Q8IZ16 206 aa20.01■□□□□ 0.79
UBE3D-204ENST00000430071 TEX13BQ9BXU2 312 aa20.01■□□□□ 0.79
UBE3D-204ENST00000430071 RBM27Q9P2N5 1060 aaKnown RBP20.01■□□□□ 0.79
UBE3D-204ENST00000430071 ISY1Q9ULR0 285 aaKnown RBP20.01■□□□□ 0.79
UBE3D-204ENST00000430071 ZMYND8Q9ULU4 1186 aaPredicted RBP20.01■□□□□ 0.79
UBE3D-204ENST00000430071 PRO3102Q9H379 93 aa20■□□□□ 0.79
UBE3D-204ENST00000430071 SYNPO2Q9UMS6 1093 aa20■□□□□ 0.79
UBE3D-204ENST00000430071 NR2E3Q9Y5X4 410 aa20■□□□□ 0.79
UBE3D-204ENST00000430071 SZT2Q5T011 3432 aa20■□□□□ 0.79
UBE3D-204ENST00000430071 ZNF536O15090 1300 aa20■□□□□ 0.79
UBE3D-204ENST00000430071 ZMYM6O95789 1325 aa20■□□□□ 0.79
UBE3D-204ENST00000430071 RAD50Q92878 1312 aa20■□□□□ 0.79
UBE3D-204ENST00000430071 SGSM2O43147 1006 aa19.99■□□□□ 0.79
UBE3D-204ENST00000430071 ZBED4O75132 1171 aa19.99■□□□□ 0.79
UBE3D-204ENST00000430071 CDC45O75419 566 aa19.99■□□□□ 0.79
UBE3D-204ENST00000430071 MFAP1P55081 439 aaKnown RBP19.99■□□□□ 0.79
UBE3D-204ENST00000430071 KCTD2Q14681 263 aa19.99■□□□□ 0.79
UBE3D-204ENST00000430071 LRRC26Q2I0M4 334 aa19.99■□□□□ 0.79
UBE3D-204ENST00000430071 TTBK2Q6IQ55 1244 aa19.99■□□□□ 0.79
UBE3D-204ENST00000430071 RUFY2Q8WXA3 655 aa19.99■□□□□ 0.79
UBE3D-204ENST00000430071 GMCL1Q96IK5 515 aa19.99■□□□□ 0.79
UBE3D-204ENST00000430071 NEDD4P46934 1319 aa19.99■□□□□ 0.79
UBE3D-204ENST00000430071 ATP2A1O14983 1001 aa19.98■□□□□ 0.79
UBE3D-204ENST00000430071 SYN1P17600 705 aa19.98■□□□□ 0.79
UBE3D-204ENST00000430071 SLC1A4P43007 532 aa19.98■□□□□ 0.79
UBE3D-204ENST00000430071 FXR1P51114 621 aaKnown RBP eCLIP19.98■□□□□ 0.79
UBE3D-204ENST00000430071 GJC2Q5T442 439 aaPredicted RBP19.98■□□□□ 0.79
UBE3D-204ENST00000430071 RCSD1Q6JBY9 416 aa19.98■□□□□ 0.79
UBE3D-204ENST00000430071 FGD4Q96M96 766 aa19.98■□□□□ 0.79
UBE3D-204ENST00000430071 AGBL1Q96MI9 1066 aa19.98■□□□□ 0.79
UBE3D-204ENST00000430071 TMEM47Q9BQJ4 181 aa19.98■□□□□ 0.79
UBE3D-204ENST00000430071 TINF2Q9BSI4 451 aa19.98■□□□□ 0.79
UBE3D-204ENST00000430071 ESYT1Q9BSJ8 1104 aa19.98■□□□□ 0.79
UBE3D-204ENST00000430071 BAZ2BQ9UIF8 2168 aaKnown RBP19.98■□□□□ 0.79
UBE3D-204ENST00000430071 DNAJC25-GNG10A0A024R161 153 aa19.97■□□□□ 0.79
UBE3D-204ENST00000430071 STAT2P52630 851 aa19.97■□□□□ 0.79
UBE3D-204ENST00000430071 AKNAD1Q5T1N1 836 aa19.97■□□□□ 0.79
UBE3D-204ENST00000430071 STAG1Q8WVM7 1258 aa19.97■□□□□ 0.79
UBE3D-204ENST00000430071 LENG1Q96BZ8 264 aaPredicted RBP19.97■□□□□ 0.79
UBE3D-204ENST00000430071 SENP6Q9GZR1 1112 aaPredicted RBP19.97■□□□□ 0.79
UBE3D-204ENST00000430071 HOMER2Q9NSB8 354 aa19.97■□□□□ 0.79
UBE3D-204ENST00000430071 SLC5A4Q9NY91 659 aa19.97■□□□□ 0.79
UBE3D-204ENST00000430071 SEPT4O43236 478 aa19.96■□□□□ 0.79
UBE3D-204ENST00000430071 SLC16A2P36021 539 aa19.96■□□□□ 0.79
UBE3D-204ENST00000430071 ZKSCAN3Q9BRR0 538 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms