RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 C16orf45Q96MC5 204 aaPredicted RBP19.05■□□□□ 0.64
SMARCA4-203ENST00000429416 IFFO1Q0D2I5 559 aa19.05■□□□□ 0.64
SMARCA4-203ENST00000429416 KIAA0753Q2KHM9 967 aa19.05■□□□□ 0.64
SMARCA4-203ENST00000429416 FAM84BQ96KN1 310 aaPredicted RBP19.05■□□□□ 0.64
SMARCA4-203ENST00000429416 MTFR1LQ9H019 292 aa19.05■□□□□ 0.64
SMARCA4-203ENST00000429416 TBC1D8BQ0IIM8 1120 aa19.05■□□□□ 0.64
SMARCA4-203ENST00000429416 USP17L10C9JJH3 530 aa19.04■□□□□ 0.64
SMARCA4-203ENST00000429416 FAM83BQ5T0W9 1011 aa19.04■□□□□ 0.64
SMARCA4-203ENST00000429416 APOA5Q6Q788 366 aa19.04■□□□□ 0.64
SMARCA4-203ENST00000429416 OTUD6BQ8N6M0 293 aa19.04■□□□□ 0.64
SMARCA4-203ENST00000429416 PDIA3P30101 505 aaKnown RBP19.04■□□□□ 0.64
SMARCA4-203ENST00000429416 GALNT17Q6IS24 598 aa19.04■□□□□ 0.64
SMARCA4-203ENST00000429416 VPS16Q9H269 839 aa19.04■□□□□ 0.64
SMARCA4-203ENST00000429416 CDC37Q16543 378 aaPredicted RBP19.04■□□□□ 0.64
SMARCA4-203ENST00000429416 SLFNL1Q499Z3 407 aa19.04■□□□□ 0.64
SMARCA4-203ENST00000429416 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.04■□□□□ 0.64
SMARCA4-203ENST00000429416 KIFAP3Q92845 792 aa19.04■□□□□ 0.64
SMARCA4-203ENST00000429416 HOXC10Q9NYD6 342 aa19.04■□□□□ 0.64
SMARCA4-203ENST00000429416 ZSWIM5Q9P217 1185 aa19.04■□□□□ 0.64
SMARCA4-203ENST00000429416 EZRP15311 586 aaKnown RBP19.04■□□□□ 0.64
SMARCA4-203ENST00000429416 ZNF157P51786 506 aaPredicted RBP19.04■□□□□ 0.64
SMARCA4-203ENST00000429416 GNG11P61952 73 aa19.04■□□□□ 0.64
SMARCA4-203ENST00000429416 CCDC102AQ96A19 550 aa19.04■□□□□ 0.64
SMARCA4-203ENST00000429416 NAA15Q9BXJ9 866 aaKnown RBP19.04■□□□□ 0.64
SMARCA4-203ENST00000429416 CD163L1Q9NR16 1453 aa19.04■□□□□ 0.64
SMARCA4-203ENST00000429416 CCND2P30279 289 aa19.03■□□□□ 0.64
SMARCA4-203ENST00000429416 ELP3Q9H9T3 547 aa19.03■□□□□ 0.64
SMARCA4-203ENST00000429416 NEXMIFQ5QGS0 1516 aa19.03■□□□□ 0.64
SMARCA4-203ENST00000429416 PFKFB2O60825 505 aa19.03■□□□□ 0.64
SMARCA4-203ENST00000429416 YARSP54577 528 aaKnown RBP19.03■□□□□ 0.64
SMARCA4-203ENST00000429416 MYSM1Q5VVJ2 828 aa19.03■□□□□ 0.64
SMARCA4-203ENST00000429416 ZSWIM6Q9HCJ5 1215 aa19.03■□□□□ 0.64
SMARCA4-203ENST00000429416 HOXA13P31271 388 aaPredicted RBP19.03■□□□□ 0.64
SMARCA4-203ENST00000429416 SLC44A5Q8NCS7 719 aa19.03■□□□□ 0.64
SMARCA4-203ENST00000429416 SCAF8Q9UPN6 1271 aaKnown RBP19.03■□□□□ 0.64
SMARCA4-203ENST00000429416 SSX2IPQ9Y2D8 614 aa19.03■□□□□ 0.64
SMARCA4-203ENST00000429416 LUC7L2Q9Y383 392 aaKnown RBP19.03■□□□□ 0.64
SMARCA4-203ENST00000429416 PCDHB13Q9Y5F0 798 aa19.03■□□□□ 0.64
SMARCA4-203ENST00000429416 MROH7-TTC4A0A0A0MT08 1334 aa19.03■□□□□ 0.64
SMARCA4-203ENST00000429416 CYP2J2P51589 502 aa19.03■□□□□ 0.64
SMARCA4-203ENST00000429416 TRIM28Q13263 835 aaKnown RBP19.03■□□□□ 0.64
SMARCA4-203ENST00000429416 ADCK5Q3MIX3 580 aa19.03■□□□□ 0.64
SMARCA4-203ENST00000429416 PRAMEF18Q5VWM3 479 aa19.03■□□□□ 0.64
SMARCA4-203ENST00000429416 CRACR2AQ9BSW2 395 aa19.03■□□□□ 0.64
SMARCA4-203ENST00000429416 STRBPQ96SI9 672 aaKnown RBP19.02■□□□□ 0.64
SMARCA4-203ENST00000429416 LRFN2Q9ULH4 789 aa19.02■□□□□ 0.64
SMARCA4-203ENST00000429416 USP42Q9H9J4 1324 aaKnown RBP19.02■□□□□ 0.64
SMARCA4-203ENST00000429416 K7ENM7 598 aa19.02■□□□□ 0.64
SMARCA4-203ENST00000429416 ZNF202O95125 648 aa19.02■□□□□ 0.64
SMARCA4-203ENST00000429416 ATP6V0A1Q93050 837 aa19.02■□□□□ 0.64
SMARCA4-203ENST00000429416 LSG1Q9H089 658 aaKnown RBP19.02■□□□□ 0.64
SMARCA4-203ENST00000429416 EIF3JO75822 258 aaKnown RBP19.02■□□□□ 0.64
SMARCA4-203ENST00000429416 RASA3Q14644 834 aa19.02■□□□□ 0.64
SMARCA4-203ENST00000429416 EHBP1Q8NDI1 1231 aa19.02■□□□□ 0.64
SMARCA4-203ENST00000429416 NOX5Q96PH1 765 aa19.02■□□□□ 0.64
SMARCA4-203ENST00000429416 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.02■□□□□ 0.64
SMARCA4-203ENST00000429416 ANGEL2Q5VTE6 544 aaKnown RBP19.02■□□□□ 0.63
SMARCA4-203ENST00000429416 ZNF34Q8IZ26 560 aa19.02■□□□□ 0.63
SMARCA4-203ENST00000429416 SLC7A3Q8WY07 619 aa19.02■□□□□ 0.63
SMARCA4-203ENST00000429416 GGA3Q9NZ52 723 aa19.02■□□□□ 0.63
SMARCA4-203ENST00000429416 IFNKQ9P0W0 207 aa19.02■□□□□ 0.63
SMARCA4-203ENST00000429416 CNTNAP4Q9C0A0 1308 aa19.01■□□□□ 0.63
SMARCA4-203ENST00000429416 GOLGA6L10A0A0M3HER8 536 aa19.01■□□□□ 0.63
SMARCA4-203ENST00000429416 MYL5Q02045 173 aa19.01■□□□□ 0.63
SMARCA4-203ENST00000429416 ZSWIM4Q9H7M6 989 aa19.01■□□□□ 0.63
SMARCA4-203ENST00000429416 ZNF521Q96K83 1311 aa19.01■□□□□ 0.63
SMARCA4-203ENST00000429416 ABL1P00519 1130 aa19.01■□□□□ 0.63
SMARCA4-203ENST00000429416 HOXD10P28358 340 aa19.01■□□□□ 0.63
SMARCA4-203ENST00000429416 LEO1Q8WVC0 666 aaPredicted RBP19.01■□□□□ 0.63
SMARCA4-203ENST00000429416 RPS6KC1Q96S38 1066 aa19.01■□□□□ 0.63
SMARCA4-203ENST00000429416 ANKFY1Q9P2R3 1169 aa19.01■□□□□ 0.63
SMARCA4-203ENST00000429416 GMPSP49915 693 aaPredicted RBP19.01■□□□□ 0.63
SMARCA4-203ENST00000429416 RNF207Q6ZRF8 634 aa19.01■□□□□ 0.63
SMARCA4-203ENST00000429416 RASEFQ8IZ41 740 aa19.01■□□□□ 0.63
SMARCA4-203ENST00000429416 RAVER2Q9HCJ3 691 aaKnown RBP19.01■□□□□ 0.63
SMARCA4-203ENST00000429416 NRKQ7Z2Y5 1582 aa19.01■□□□□ 0.63
SMARCA4-203ENST00000429416 CDHR1Q96JP9 859 aa19.01■□□□□ 0.63
SMARCA4-203ENST00000429416 IWS1Q96ST2 819 aa19.01■□□□□ 0.63
SMARCA4-203ENST00000429416 PPP1R16BQ96T49 567 aa19.01■□□□□ 0.63
SMARCA4-203ENST00000429416 LARSQ9P2J5 1176 aaKnown RBP19.01■□□□□ 0.63
SMARCA4-203ENST00000429416 PAK1Q13153 545 aa19■□□□□ 0.63
SMARCA4-203ENST00000429416 FAM178BQ8IXR5 827 aa19■□□□□ 0.63
SMARCA4-203ENST00000429416 INO80B-WBP1J3KQ70 363 aa19■□□□□ 0.63
SMARCA4-203ENST00000429416 DMP1Q13316 513 aaPredicted RBP19■□□□□ 0.63
SMARCA4-203ENST00000429416 SNRNP48Q6IEG0 339 aaKnown RBP19■□□□□ 0.63
SMARCA4-203ENST00000429416 GSTA5Q7RTV2 222 aa19■□□□□ 0.63
SMARCA4-203ENST00000429416 DYDC1Q8WWB3 177 aa19■□□□□ 0.63
SMARCA4-203ENST00000429416 INO80BQ9C086 356 aaPredicted RBP19■□□□□ 0.63
SMARCA4-203ENST00000429416 SETBP1Q9Y6X0 1596 aa19■□□□□ 0.63
SMARCA4-203ENST00000429416 PRPHP41219 470 aa19■□□□□ 0.63
SMARCA4-203ENST00000429416 STRIP1Q5VSL9 837 aa19■□□□□ 0.63
SMARCA4-203ENST00000429416 SLF1Q9BQI6 1058 aa19■□□□□ 0.63
SMARCA4-203ENST00000429416 MRPS9P82933 396 aaKnown RBP19■□□□□ 0.63
SMARCA4-203ENST00000429416 UVSSAQ2YD98 709 aa19■□□□□ 0.63
SMARCA4-203ENST00000429416 RETREG2Q8NC44 543 aa19■□□□□ 0.63
SMARCA4-203ENST00000429416 MXD3Q9BW11 206 aa19■□□□□ 0.63
SMARCA4-203ENST00000429416 LAMC1P11047 1609 aa19■□□□□ 0.63
SMARCA4-203ENST00000429416 ESPNB1AK53 854 aa19■□□□□ 0.63
SMARCA4-203ENST00000429416 TERF1P54274 439 aa19■□□□□ 0.63
SMARCA4-203ENST00000429416 KIF5AQ12840 1032 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms