RNA–Protein interactions for RNA: ENST00000429205.6

SENP3-202, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SENP3, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-202ENST00000429205 TEKT1Q969V4 418 aa15.25■□□□□ 0.03
SENP3-202ENST00000429205 DDX4Q9NQI0 724 aaKnown RBP15.25■□□□□ 0.03
SENP3-202ENST00000429205 USP40Q9NVE5 1235 aa15.25■□□□□ 0.03
SENP3-202ENST00000429205 ATP8B1O43520 1251 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 DDAH1O94760 285 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 PLEKHA8P1O95397 391 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 FAM163BP0C2L3 166 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 CDK8P49336 464 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 C16orf86Q6ZW13 317 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 CCDC186Q7Z3E2 898 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 ZNF444Q8N0Y2 327 aaPredicted RBP15.24■□□□□ 0.03
SENP3-202ENST00000429205 PGBD1Q96JS3 809 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 ZNF396Q96N95 335 aaPredicted RBP15.24■□□□□ 0.03
SENP3-202ENST00000429205 IRAK4Q9NWZ3 460 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 SUN2Q9UH99 717 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 PPIP5K2O43314 1243 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 CAND2O75155 1236 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 RPS6KA5O75582 802 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 TSPY3P0CV98 308 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 TSPY8P0CW00 308 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 CALM1P0DP23 149 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 CALM2P0DP24 149 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 CALM3P0DP25 149 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 IMPDH2P12268 514 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 CRKP46108 304 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 FUT2Q10981 343 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 ATL3Q6DD88 541 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 CDC42EP5Q6NZY7 148 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 BRAPQ7Z569 592 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 KIAA1524Q8TCG1 905 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 RCOR1Q9UKL0 485 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 PCDHGA4Q9Y5G9 962 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 PCDHAC2Q9Y5I4 1007 aa15.24■□□□□ 0.03
SENP3-202ENST00000429205 GOLGA6L4A6NEF3 574 aa15.23■□□□□ 0.03
SENP3-202ENST00000429205 ZRANB2O95218 330 aaKnown RBP eCLIP15.23■□□□□ 0.03
SENP3-202ENST00000429205 DEXIO95424 95 aa15.23■□□□□ 0.03
SENP3-202ENST00000429205 NT5C2P49902 561 aa15.23■□□□□ 0.03
SENP3-202ENST00000429205 TRIM29Q14134 588 aa15.23■□□□□ 0.03
SENP3-202ENST00000429205 CCDC183Q5T5S1 534 aa15.23■□□□□ 0.03
SENP3-202ENST00000429205 TRIM74Q86UV6 250 aa15.23■□□□□ 0.03
SENP3-202ENST00000429205 TRIM73Q86UV7 250 aa15.23■□□□□ 0.03
SENP3-202ENST00000429205 DGKHQ86XP1 1220 aa15.23■□□□□ 0.03
SENP3-202ENST00000429205 SUPT20HQ8NEM7 779 aa15.23■□□□□ 0.03
SENP3-202ENST00000429205 WASF1Q92558 559 aa15.23■□□□□ 0.03
SENP3-202ENST00000429205 DDX60LQ5H9U9 1706 aaKnown RBP15.23■□□□□ 0.03
SENP3-202ENST00000429205 ECM29Q5VYK3 1845 aa15.23■□□□□ 0.03
SENP3-202ENST00000429205 FKBP1AP62942 108 aaKnown RBP15.23■□□□□ 0.03
SENP3-202ENST00000429205 MYSM1Q5VVJ2 828 aa15.23■□□□□ 0.03
SENP3-202ENST00000429205 CCDC125Q86Z20 511 aa15.23■□□□□ 0.03
SENP3-202ENST00000429205 NME8Q8N427 588 aa15.23■□□□□ 0.03
SENP3-202ENST00000429205 DRAXINQ8NBI3 349 aaPredicted RBP15.23■□□□□ 0.03
SENP3-202ENST00000429205 LSM14AQ8ND56 463 aaKnown RBP15.23■□□□□ 0.03
SENP3-202ENST00000429205 KCNF1Q9H3M0 494 aa15.23■□□□□ 0.03
SENP3-202ENST00000429205 ZNF287Q9HBT7 754 aa15.23■□□□□ 0.03
SENP3-202ENST00000429205 PYCARDQ9ULZ3 195 aa15.23■□□□□ 0.03
SENP3-202ENST00000429205 YDJCA8MPS7 323 aa15.22■□□□□ 0.03
SENP3-202ENST00000429205 PRPHP41219 470 aa15.22■□□□□ 0.03
SENP3-202ENST00000429205 PDIA5Q14554 519 aa15.22■□□□□ 0.03
SENP3-202ENST00000429205 ZRSR1Q15695 479 aaKnown RBP15.22■□□□□ 0.03
SENP3-202ENST00000429205 CCDC93Q567U6 631 aa15.22■□□□□ 0.03
SENP3-202ENST00000429205 TMTC3Q6ZXV5 915 aa15.22■□□□□ 0.03
SENP3-202ENST00000429205 RBM12BQ8IXT5 1001 aaKnown RBP15.22■□□□□ 0.03
SENP3-202ENST00000429205 PROCA1Q8NCQ7 364 aaPredicted RBP15.22■□□□□ 0.03
SENP3-202ENST00000429205 RNF26Q9BY78 433 aaPredicted RBP15.22■□□□□ 0.03
SENP3-202ENST00000429205 KAT14Q9H8E8 782 aa15.22■□□□□ 0.03
SENP3-202ENST00000429205 TCP11L1Q9NUJ3 509 aa15.22■□□□□ 0.03
SENP3-202ENST00000429205 CPSF2Q9P2I0 782 aaKnown RBP15.22■□□□□ 0.03
SENP3-202ENST00000429205 PPP1R1BQ9UD71 204 aaPredicted RBP15.22■□□□□ 0.03
SENP3-202ENST00000429205 hCG_1642624A0A1W2PR95 340 aa15.21■□□□□ 0.03
SENP3-202ENST00000429205 SKILP12757 684 aa15.21■□□□□ 0.03
SENP3-202ENST00000429205 NFIAQ12857 509 aa15.21■□□□□ 0.03
SENP3-202ENST00000429205 R3HDM1Q15032 1099 aaKnown RBP15.21■□□□□ 0.03
SENP3-202ENST00000429205 CTCFLQ8NI51 663 aaPredicted RBP15.21■□□□□ 0.03
SENP3-202ENST00000429205 ANKS1AQ92625 1134 aa15.21■□□□□ 0.03
SENP3-202ENST00000429205 ZDHHC15Q96MV8 337 aa15.21■□□□□ 0.03
SENP3-202ENST00000429205 AGAP3Q96P47 875 aa15.21■□□□□ 0.03
SENP3-202ENST00000429205 KCNJ14Q9UNX9 436 aa15.21■□□□□ 0.03
SENP3-202ENST00000429205 CLIC4Q9Y696 253 aa15.21■□□□□ 0.03
SENP3-202ENST00000429205 MYH1P12882 1939 aa15.21■□□□□ 0.03
SENP3-202ENST00000429205 FOCADQ5VW36 1801 aa15.21■□□□□ 0.03
SENP3-202ENST00000429205 CRYMQ14894 314 aa15.21■□□□□ 0.03
SENP3-202ENST00000429205 RBBP5Q15291 538 aaKnown RBP15.21■□□□□ 0.03
SENP3-202ENST00000429205 PKN1Q16512 942 aa15.21■□□□□ 0.03
SENP3-202ENST00000429205 RTKN2Q8IZC4 609 aa15.21■□□□□ 0.03
SENP3-202ENST00000429205 PNMA1Q8ND90 353 aa15.21■□□□□ 0.03
SENP3-202ENST00000429205 FAM107BQ9H098 131 aa15.21■□□□□ 0.03
SENP3-202ENST00000429205 RTEL1Q9NZ71 1219 aa15.21■□□□□ 0.03
SENP3-202ENST00000429205 V9GY48 417 aaPredicted RBP15.21■□□□□ 0.03
SENP3-202ENST00000429205 KIF2AO00139 706 aaPredicted RBP15.2■□□□□ 0.02
SENP3-202ENST00000429205 AKAP17AQ02040 695 aaKnown RBP15.2■□□□□ 0.02
SENP3-202ENST00000429205 GNL2Q13823 731 aaKnown RBP15.2■□□□□ 0.02
SENP3-202ENST00000429205 MCM6Q14566 821 aa15.2■□□□□ 0.02
SENP3-202ENST00000429205 SRBD1Q8N5C6 995 aaKnown RBP15.2■□□□□ 0.02
SENP3-202ENST00000429205 BICD2Q8TD16 824 aa15.2■□□□□ 0.02
SENP3-202ENST00000429205 SLX1AQ9BQ83 275 aa15.2■□□□□ 0.02
SENP3-202ENST00000429205 LZTS2Q9BRK4 669 aa15.2■□□□□ 0.02
SENP3-202ENST00000429205 MRIQ9BWK5 157 aa15.2■□□□□ 0.02
SENP3-202ENST00000429205 STX8Q9UNK0 236 aa15.2■□□□□ 0.02
SENP3-202ENST00000429205 ZNF646O15015 1829 aaPredicted RBP15.2■□□□□ 0.02
SENP3-202ENST00000429205 PRPF3O43395 683 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms