RNA–Protein interactions for RNA: ENST00000428892.1

APOBEC3C-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3C, humanhuman

TSL 3

Gene APOBEC3C, Length 1,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3C-202ENST00000428892 XPNPEP3Q9NQH7 507 aa12.96□□□□□ -0.33
APOBEC3C-202ENST00000428892 ATP8A2Q9NTI2 1148 aa12.96□□□□□ -0.33
APOBEC3C-202ENST00000428892 M0R2C6 588 aa12.95□□□□□ -0.34
APOBEC3C-202ENST00000428892 CLTBP09497 229 aa12.95□□□□□ -0.34
APOBEC3C-202ENST00000428892 RAG1P15918 1043 aa12.95□□□□□ -0.34
APOBEC3C-202ENST00000428892 PDE4AP27815 886 aa12.95□□□□□ -0.34
APOBEC3C-202ENST00000428892 SNX17Q15036 470 aa12.95□□□□□ -0.34
APOBEC3C-202ENST00000428892 ZMYM1Q5SVZ6 1142 aa12.95□□□□□ -0.34
APOBEC3C-202ENST00000428892 PRAMEF19Q5SWL8 479 aa12.95□□□□□ -0.34
APOBEC3C-202ENST00000428892 TMEM179Q6ZVK1 233 aa12.95□□□□□ -0.34
APOBEC3C-202ENST00000428892 TICAM2Q86XR7 235 aa12.95□□□□□ -0.34
APOBEC3C-202ENST00000428892 AMOTL1Q8IY63 956 aa12.95□□□□□ -0.34
APOBEC3C-202ENST00000428892 EVI5LQ96CN4 794 aa12.95□□□□□ -0.34
APOBEC3C-202ENST00000428892 MAML3Q96JK9 1138 aa12.95□□□□□ -0.34
APOBEC3C-202ENST00000428892 TACC3Q9Y6A5 838 aa12.95□□□□□ -0.34
APOBEC3C-202ENST00000428892 LAMA2P24043 3122 aaKnown RBP12.95□□□□□ -0.34
APOBEC3C-202ENST00000428892 EYSQ5T1H1 3165 aa12.94□□□□□ -0.34
APOBEC3C-202ENST00000428892 TMEM265A0A087WTH1 108 aa12.94□□□□□ -0.34
APOBEC3C-202ENST00000428892 GSG1L2A8MUP6 293 aa12.94□□□□□ -0.34
APOBEC3C-202ENST00000428892 GPAA1O43292 621 aa12.94□□□□□ -0.34
APOBEC3C-202ENST00000428892 RAD21O60216 631 aa12.94□□□□□ -0.34
APOBEC3C-202ENST00000428892 PQBP1O60828 265 aaKnown RBP12.94□□□□□ -0.34
APOBEC3C-202ENST00000428892 COBLO75128 1261 aa12.94□□□□□ -0.34
APOBEC3C-202ENST00000428892 CYP2D6P10635 497 aa12.94□□□□□ -0.34
APOBEC3C-202ENST00000428892 PYGBP11216 843 aa12.94□□□□□ -0.34
APOBEC3C-202ENST00000428892 ICA1Q05084 483 aa12.94□□□□□ -0.34
APOBEC3C-202ENST00000428892 FPGSQ05932 587 aa12.94□□□□□ -0.34
APOBEC3C-202ENST00000428892 KCTD2Q14681 263 aa12.94□□□□□ -0.34
APOBEC3C-202ENST00000428892 LRRFIP1Q32MZ4 808 aaKnown RBP12.94□□□□□ -0.34
APOBEC3C-202ENST00000428892 SH3RF1Q7Z6J0 888 aa12.94□□□□□ -0.34
APOBEC3C-202ENST00000428892 ABRAQ8N0Z2 381 aa12.94□□□□□ -0.34
APOBEC3C-202ENST00000428892 SPICE1Q8N0Z3 855 aa12.94□□□□□ -0.34
APOBEC3C-202ENST00000428892 MMP19Q99542 508 aa12.94□□□□□ -0.34
APOBEC3C-202ENST00000428892 FSD1Q9BTV5 496 aa12.94□□□□□ -0.34
APOBEC3C-202ENST00000428892 SWAP70Q9UH65 585 aa12.94□□□□□ -0.34
APOBEC3C-202ENST00000428892 SLC4A4Q9Y6R1 1079 aa12.94□□□□□ -0.34
APOBEC3C-202ENST00000428892 GREB1LQ9C091 1923 aaPredicted RBP12.94□□□□□ -0.34
APOBEC3C-202ENST00000428892 MYH4Q9Y623 1939 aa12.94□□□□□ -0.34
APOBEC3C-202ENST00000428892 A0A1W2PRG0 241 aa12.93□□□□□ -0.34
APOBEC3C-202ENST00000428892 TRIM43BA6NCK2 446 aa12.93□□□□□ -0.34
APOBEC3C-202ENST00000428892 SMIM22K7EJ46 135 aa12.93□□□□□ -0.34
APOBEC3C-202ENST00000428892 SLC25A27O95847 323 aa12.93□□□□□ -0.34
APOBEC3C-202ENST00000428892 GUCY1A2P33402 732 aa12.93□□□□□ -0.34
APOBEC3C-202ENST00000428892 TLE2Q04725 743 aa12.93□□□□□ -0.34
APOBEC3C-202ENST00000428892 C12orf60Q5U649 245 aa12.93□□□□□ -0.34
APOBEC3C-202ENST00000428892 C1orf53Q5VUE5 145 aa12.93□□□□□ -0.34
APOBEC3C-202ENST00000428892 GIMAP6Q6P9H5 292 aa12.93□□□□□ -0.34
APOBEC3C-202ENST00000428892 TRIM43Q96BQ3 446 aaPredicted RBP12.93□□□□□ -0.34
APOBEC3C-202ENST00000428892 ATG4CQ96DT6 458 aa12.93□□□□□ -0.34
APOBEC3C-202ENST00000428892 CCDC136Q96JN2 1154 aa12.93□□□□□ -0.34
APOBEC3C-202ENST00000428892 SEC62Q99442 399 aaKnown RBP12.93□□□□□ -0.34
APOBEC3C-202ENST00000428892 TTYH1Q9H313 450 aaPredicted RBP12.93□□□□□ -0.34
APOBEC3C-202ENST00000428892 EPB41L4AQ9HCS5 686 aaPredicted RBP12.93□□□□□ -0.34
APOBEC3C-202ENST00000428892 TMEM39AQ9NV64 488 aa12.93□□□□□ -0.34
APOBEC3C-202ENST00000428892 CDH23Q9H251 3354 aa12.92□□□□□ -0.34
APOBEC3C-202ENST00000428892 CYP2D7A0A087X1C5 515 aa12.92□□□□□ -0.34
APOBEC3C-202ENST00000428892 WDR46O15213 610 aaKnown RBP12.92□□□□□ -0.34
APOBEC3C-202ENST00000428892 FOXP2O15409 715 aa12.92□□□□□ -0.34
APOBEC3C-202ENST00000428892 AKR1A1P14550 325 aa12.92□□□□□ -0.34
APOBEC3C-202ENST00000428892 CTR9Q6PD62 1173 aa12.92□□□□□ -0.34
APOBEC3C-202ENST00000428892 GBF1Q92538 1859 aa12.92□□□□□ -0.34
APOBEC3C-202ENST00000428892 DDRGK1Q96HY6 314 aa12.92□□□□□ -0.34
APOBEC3C-202ENST00000428892 PRDM6Q9NQX0 595 aa12.92□□□□□ -0.34
APOBEC3C-202ENST00000428892 STARD7Q9NQZ5 370 aa12.92□□□□□ -0.34
APOBEC3C-202ENST00000428892 NRBP1Q9UHY1 535 aa12.92□□□□□ -0.34
APOBEC3C-202ENST00000428892 PHF24Q9UPV7 400 aa12.92□□□□□ -0.34
APOBEC3C-202ENST00000428892 CNPY2Q9Y2B0 182 aa12.92□□□□□ -0.34
APOBEC3C-202ENST00000428892 MCM3APO60318 1980 aa12.92□□□□□ -0.34
APOBEC3C-202ENST00000428892 ROBO3Q96MS0 1386 aa12.92□□□□□ -0.34
APOBEC3C-202ENST00000428892 VCANP13611 3396 aa12.91□□□□□ -0.34
APOBEC3C-202ENST00000428892 A0A1W2PQ45 241 aaPredicted RBP12.91□□□□□ -0.34
APOBEC3C-202ENST00000428892 A0A1W2PQY0 241 aa12.91□□□□□ -0.34
APOBEC3C-202ENST00000428892 DCDC2CA8MYV0 355 aa12.91□□□□□ -0.34
APOBEC3C-202ENST00000428892 USP17L12C9JPN9 530 aa12.91□□□□□ -0.34
APOBEC3C-202ENST00000428892 USP17L21D6R901 530 aa12.91□□□□□ -0.34
APOBEC3C-202ENST00000428892 PGK1P00558 417 aa12.91□□□□□ -0.34
APOBEC3C-202ENST00000428892 GNAT2P19087 354 aa12.91□□□□□ -0.34
APOBEC3C-202ENST00000428892 SBK1Q52WX2 424 aa12.91□□□□□ -0.34
APOBEC3C-202ENST00000428892 CCDC174Q6PII3 467 aa12.91□□□□□ -0.34
APOBEC3C-202ENST00000428892 SLC44A5Q8NCS7 719 aa12.91□□□□□ -0.34
APOBEC3C-202ENST00000428892 NUP133Q8WUM0 1156 aa12.91□□□□□ -0.34
APOBEC3C-202ENST00000428892 TINF2Q9BSI4 451 aa12.91□□□□□ -0.34
APOBEC3C-202ENST00000428892 VCPKMTQ9H867 229 aa12.91□□□□□ -0.34
APOBEC3C-202ENST00000428892 GOPCQ9HD26 462 aa12.91□□□□□ -0.34
APOBEC3C-202ENST00000428892 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.9□□□□□ -0.34
APOBEC3C-202ENST00000428892 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.9□□□□□ -0.34
APOBEC3C-202ENST00000428892 IGHA2P01877 340 aa12.9□□□□□ -0.34
APOBEC3C-202ENST00000428892 PGK2P07205 417 aa12.9□□□□□ -0.34
APOBEC3C-202ENST00000428892 DNAJB2P25686 324 aa12.9□□□□□ -0.34
APOBEC3C-202ENST00000428892 COPB2P35606 906 aa12.9□□□□□ -0.34
APOBEC3C-202ENST00000428892 CCDC129Q6ZRS4 1044 aa12.9□□□□□ -0.34
APOBEC3C-202ENST00000428892 C16orf86Q6ZW13 317 aa12.9□□□□□ -0.34
APOBEC3C-202ENST00000428892 CLEC10AQ8IUN9 316 aa12.9□□□□□ -0.34
APOBEC3C-202ENST00000428892 DYNLL2Q96FJ2 89 aa12.9□□□□□ -0.34
APOBEC3C-202ENST00000428892 GAS2L1Q99501 681 aaPredicted RBP12.9□□□□□ -0.34
APOBEC3C-202ENST00000428892 ARPP21Q9UBL0 812 aaPredicted RBP12.9□□□□□ -0.34
APOBEC3C-202ENST00000428892 TMX2Q9Y320 296 aa12.9□□□□□ -0.34
APOBEC3C-202ENST00000428892 CTDP1Q9Y5B0 961 aaPredicted RBP12.9□□□□□ -0.34
APOBEC3C-202ENST00000428892 MYO9BQ13459 2157 aa12.89□□□□□ -0.35
APOBEC3C-202ENST00000428892 A0A0D9SFI3 127 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms