RNA–Protein interactions for RNA: ENST00000428835.5

HLA-DPB1-212, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

APPRIS ALT2

Gene HLA-DPB1, Length 688 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-212ENST00000428835 ZNF543Q08ER8 600 aa23.71■■□□□ 1.39
HLA-DPB1-212ENST00000428835 KRT32Q14532 448 aa23.71■■□□□ 1.39
HLA-DPB1-212ENST00000428835 NCAPG2Q86XI2 1143 aa23.71■■□□□ 1.39
HLA-DPB1-212ENST00000428835 SHCBP1Q8NEM2 672 aa23.71■■□□□ 1.39
HLA-DPB1-212ENST00000428835 IGDCC4Q8TDY8 1250 aa23.71■■□□□ 1.39
HLA-DPB1-212ENST00000428835 NEK1Q96PY6 1258 aa23.71■■□□□ 1.39
HLA-DPB1-212ENST00000428835 SLC38A10Q9HBR0 1119 aa23.71■■□□□ 1.39
HLA-DPB1-212ENST00000428835 GJD2Q9UKL4 321 aa23.71■■□□□ 1.39
HLA-DPB1-212ENST00000428835 IVNS1ABPQ9Y6Y0 642 aa23.71■■□□□ 1.39
HLA-DPB1-212ENST00000428835 EPB41L2O43491 1005 aaKnown RBP23.7■■□□□ 1.38
HLA-DPB1-212ENST00000428835 SLC25A27O95847 323 aa23.7■■□□□ 1.38
HLA-DPB1-212ENST00000428835 SLC16A2P36021 539 aa23.7■■□□□ 1.38
HLA-DPB1-212ENST00000428835 SLC9C1Q4G0N8 1177 aa23.7■■□□□ 1.38
HLA-DPB1-212ENST00000428835 CPXCR1Q8N123 301 aa23.7■■□□□ 1.38
HLA-DPB1-212ENST00000428835 NUDT12Q9BQG2 462 aa23.7■■□□□ 1.38
HLA-DPB1-212ENST00000428835 MROH8Q9H579 483 aa23.7■■□□□ 1.38
HLA-DPB1-212ENST00000428835 ZNF214Q9UL59 606 aaPredicted RBP23.7■■□□□ 1.38
HLA-DPB1-212ENST00000428835 PRR12Q9ULL5 1215 aa23.7■■□□□ 1.38
HLA-DPB1-212ENST00000428835 MGAMO43451 1857 aa23.7■■□□□ 1.38
HLA-DPB1-212ENST00000428835 GOLGA8HP0CJ92 632 aa23.69■■□□□ 1.38
HLA-DPB1-212ENST00000428835 SLC4A3P48751 1232 aa23.69■■□□□ 1.38
HLA-DPB1-212ENST00000428835 GPATCH4Q5T3I0 446 aaKnown RBP23.69■■□□□ 1.38
HLA-DPB1-212ENST00000428835 BTNL9Q6UXG8 535 aa23.69■■□□□ 1.38
HLA-DPB1-212ENST00000428835 RIOX2Q8IUF8 465 aa23.69■■□□□ 1.38
HLA-DPB1-212ENST00000428835 SOCS4Q8WXH5 440 aa23.69■■□□□ 1.38
HLA-DPB1-212ENST00000428835 KCNB2Q92953 911 aa23.69■■□□□ 1.38
HLA-DPB1-212ENST00000428835 MTA3Q9BTC8 594 aa23.69■■□□□ 1.38
HLA-DPB1-212ENST00000428835 TEX13BQ9BXU2 312 aa23.69■■□□□ 1.38
HLA-DPB1-212ENST00000428835 USP26Q9BXU7 913 aa23.69■■□□□ 1.38
HLA-DPB1-212ENST00000428835 RAVER2Q9HCJ3 691 aaKnown RBP23.69■■□□□ 1.38
HLA-DPB1-212ENST00000428835 IRF5Q13568 498 aa23.68■■□□□ 1.38
HLA-DPB1-212ENST00000428835 ADCK5Q3MIX3 580 aa23.68■■□□□ 1.38
HLA-DPB1-212ENST00000428835 SYDE2Q5VT97 1194 aa23.68■■□□□ 1.38
HLA-DPB1-212ENST00000428835 SNRNP48Q6IEG0 339 aaKnown RBP23.68■■□□□ 1.38
HLA-DPB1-212ENST00000428835 NBPF11Q86T75 865 aa23.68■■□□□ 1.38
HLA-DPB1-212ENST00000428835 TMEM87BQ96K49 555 aa23.68■■□□□ 1.38
HLA-DPB1-212ENST00000428835 SENP2Q9HC62 589 aa23.68■■□□□ 1.38
HLA-DPB1-212ENST00000428835 SLC15A5A6NIM6 579 aa23.67■■□□□ 1.38
HLA-DPB1-212ENST00000428835 CCDC85CA6NKD9 419 aa23.67■■□□□ 1.38
HLA-DPB1-212ENST00000428835 ATP2A1O14983 1001 aa23.67■■□□□ 1.38
HLA-DPB1-212ENST00000428835 STRNO43815 780 aa23.67■■□□□ 1.38
HLA-DPB1-212ENST00000428835 ADCY3O60266 1144 aa23.67■■□□□ 1.38
HLA-DPB1-212ENST00000428835 PARP1P09874 1014 aaKnown RBP23.67■■□□□ 1.38
HLA-DPB1-212ENST00000428835 CYP2B6P20813 491 aa23.67■■□□□ 1.38
HLA-DPB1-212ENST00000428835 PTPREP23469 700 aa23.67■■□□□ 1.38
HLA-DPB1-212ENST00000428835 GRK4P32298 578 aa23.67■■□□□ 1.38
HLA-DPB1-212ENST00000428835 COPB2P35606 906 aa23.67■■□□□ 1.38
HLA-DPB1-212ENST00000428835 OAZ1P54368 228 aa23.67■■□□□ 1.38
HLA-DPB1-212ENST00000428835 SNAP25P60880 206 aa23.67■■□□□ 1.38
HLA-DPB1-212ENST00000428835 COL9A3Q14050 684 aaPredicted RBP23.67■■□□□ 1.38
HLA-DPB1-212ENST00000428835 ASPRV1Q53RT3 343 aa23.67■■□□□ 1.38
HLA-DPB1-212ENST00000428835 MORN1Q5T089 497 aa23.67■■□□□ 1.38
HLA-DPB1-212ENST00000428835 SNX14Q9Y5W7 946 aa23.67■■□□□ 1.38
HLA-DPB1-212ENST00000428835 PARP14Q460N5 1801 aa23.67■■□□□ 1.38
HLA-DPB1-212ENST00000428835 A0A0G2JMZ2 1700 aa23.67■■□□□ 1.38
HLA-DPB1-212ENST00000428835 RGS2P41220 211 aa23.66■■□□□ 1.38
HLA-DPB1-212ENST00000428835 CCDC174Q6PII3 467 aa23.66■■□□□ 1.38
HLA-DPB1-212ENST00000428835 NFXL1Q6ZNB6 911 aa23.66■■□□□ 1.38
HLA-DPB1-212ENST00000428835 DHX32Q7L7V1 743 aaKnown RBP23.66■■□□□ 1.38
HLA-DPB1-212ENST00000428835 CATIPQ7Z7H3 387 aa23.66■■□□□ 1.38
HLA-DPB1-212ENST00000428835 TMTC2Q8N394 836 aa23.66■■□□□ 1.38
HLA-DPB1-212ENST00000428835 SLAIN1Q8ND83 568 aa23.66■■□□□ 1.38
HLA-DPB1-212ENST00000428835 SH3TC2Q8TF17 1288 aa23.66■■□□□ 1.38
HLA-DPB1-212ENST00000428835 LRRC2Q9BYS8 371 aa23.66■■□□□ 1.38
HLA-DPB1-212ENST00000428835 UBA5Q9GZZ9 404 aa23.66■■□□□ 1.38
HLA-DPB1-212ENST00000428835 LY9Q9HBG7 655 aa23.66■■□□□ 1.38
HLA-DPB1-212ENST00000428835 GPHNQ9NQX3 736 aaPredicted RBP23.66■■□□□ 1.38
HLA-DPB1-212ENST00000428835 BIN2Q9UBW5 565 aaPredicted RBP23.66■■□□□ 1.38
HLA-DPB1-212ENST00000428835 GTF3C3Q9Y5Q9 886 aa23.66■■□□□ 1.38
HLA-DPB1-212ENST00000428835 SH2B2O14492 632 aaPredicted RBP23.65■■□□□ 1.38
HLA-DPB1-212ENST00000428835 EIF5BO60841 1220 aaKnown RBP23.65■■□□□ 1.38
HLA-DPB1-212ENST00000428835 HMGB1P09429 215 aaKnown RBP23.65■■□□□ 1.38
HLA-DPB1-212ENST00000428835 PXYLP1Q8TE99 480 aa23.65■■□□□ 1.38
HLA-DPB1-212ENST00000428835 JAKMIP1Q96N16 626 aaKnown RBP23.65■■□□□ 1.38
HLA-DPB1-212ENST00000428835 RIPK3Q9Y572 518 aa23.65■■□□□ 1.38
HLA-DPB1-212ENST00000428835 DOCK3Q8IZD9 2030 aa23.64■■□□□ 1.38
HLA-DPB1-212ENST00000428835 CCDC69A6NI79 296 aa23.64■■□□□ 1.37
HLA-DPB1-212ENST00000428835 FCER1AP12319 257 aa23.64■■□□□ 1.37
HLA-DPB1-212ENST00000428835 ELNP15502 786 aa23.64■■□□□ 1.37
HLA-DPB1-212ENST00000428835 EXOSC10Q01780 885 aaKnown RBP23.64■■□□□ 1.37
HLA-DPB1-212ENST00000428835 MAP2K5Q13163 448 aa23.64■■□□□ 1.37
HLA-DPB1-212ENST00000428835 GRB14Q14449 540 aa23.64■■□□□ 1.37
HLA-DPB1-212ENST00000428835 USP6NLQ92738 828 aa23.64■■□□□ 1.37
HLA-DPB1-212ENST00000428835 ARMC5Q96C12 935 aa23.64■■□□□ 1.37
HLA-DPB1-212ENST00000428835 AGBL1Q96MI9 1066 aa23.64■■□□□ 1.37
HLA-DPB1-212ENST00000428835 RANBP17Q9H2T7 1088 aaKnown RBP23.64■■□□□ 1.37
HLA-DPB1-212ENST00000428835 CAPN15O75808 1086 aa23.63■■□□□ 1.37
HLA-DPB1-212ENST00000428835 PSMA5P28066 241 aa23.63■■□□□ 1.37
HLA-DPB1-212ENST00000428835 DPP9Q86TI2 863 aa23.63■■□□□ 1.37
HLA-DPB1-212ENST00000428835 ABRAQ8N0Z2 381 aa23.63■■□□□ 1.37
HLA-DPB1-212ENST00000428835 NUP133Q8WUM0 1156 aa23.63■■□□□ 1.37
HLA-DPB1-212ENST00000428835 MMP19Q99542 508 aa23.63■■□□□ 1.37
HLA-DPB1-212ENST00000428835 CPVLQ9H3G5 476 aa23.63■■□□□ 1.37
HLA-DPB1-212ENST00000428835 ZNF536O15090 1300 aa23.62■■□□□ 1.37
HLA-DPB1-212ENST00000428835 WDR19Q8NEZ3 1342 aa23.62■■□□□ 1.37
HLA-DPB1-212ENST00000428835 COL11A1P12107 1806 aaPredicted RBP23.62■■□□□ 1.37
HLA-DPB1-212ENST00000428835 XRCC5P13010 732 aaKnown RBP23.62■■□□□ 1.37
HLA-DPB1-212ENST00000428835 ADORA2AP29274 412 aa23.62■■□□□ 1.37
HLA-DPB1-212ENST00000428835 LIFRP42702 1097 aa23.62■■□□□ 1.37
HLA-DPB1-212ENST00000428835 TROAPQ12815 778 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms