RNA–Protein interactions for RNA: ENST00000428336.5

TSPO-204, Transcript of translocator protein, humanhuman

TSL 5

Gene TSPO, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-204ENST00000428336 FEM1BQ9UK73 627 aa18.28■□□□□ 0.52
TSPO-204ENST00000428336 ZNF236Q9UL36 1845 aa18.28■□□□□ 0.52
TSPO-204ENST00000428336 RANBP6O60518 1105 aaKnown RBP18.27■□□□□ 0.52
TSPO-204ENST00000428336 MSCO60682 206 aa18.27■□□□□ 0.52
TSPO-204ENST00000428336 PGK2P07205 417 aa18.27■□□□□ 0.52
TSPO-204ENST00000428336 BMP3P12645 472 aa18.27■□□□□ 0.52
TSPO-204ENST00000428336 CNGA1P29973 690 aa18.27■□□□□ 0.52
TSPO-204ENST00000428336 KCTD2Q14681 263 aa18.27■□□□□ 0.52
TSPO-204ENST00000428336 PRAMEF19Q5SWL8 479 aa18.27■□□□□ 0.52
TSPO-204ENST00000428336 SNRNP48Q6IEG0 339 aaKnown RBP18.27■□□□□ 0.52
TSPO-204ENST00000428336 CHRDL2Q6WN34 429 aa18.27■□□□□ 0.52
TSPO-204ENST00000428336 KIFC2Q96AC6 838 aa18.27■□□□□ 0.52
TSPO-204ENST00000428336 PRO3102Q9H379 93 aa18.27■□□□□ 0.52
TSPO-204ENST00000428336 SLC38A10Q9HBR0 1119 aa18.27■□□□□ 0.52
TSPO-204ENST00000428336 PARP14Q460N5 1801 aa18.27■□□□□ 0.52
TSPO-204ENST00000428336 ZMYM6O95789 1325 aa18.26■□□□□ 0.51
TSPO-204ENST00000428336 CEP290O15078 2479 aa18.26■□□□□ 0.51
TSPO-204ENST00000428336 ZBED4O75132 1171 aa18.26■□□□□ 0.51
TSPO-204ENST00000428336 PPP4R3BQ5MIZ7 849 aa18.26■□□□□ 0.51
TSPO-204ENST00000428336 CPXCR1Q8N123 301 aa18.26■□□□□ 0.51
TSPO-204ENST00000428336 GMCL1Q96IK5 515 aa18.26■□□□□ 0.51
TSPO-204ENST00000428336 RAVER2Q9HCJ3 691 aaKnown RBP18.26■□□□□ 0.51
TSPO-204ENST00000428336 STX8Q9UNK0 236 aa18.26■□□□□ 0.51
TSPO-204ENST00000428336 DIS3Q9Y2L1 958 aaKnown RBP18.26■□□□□ 0.51
TSPO-204ENST00000428336 TMEM232C9JQI7 657 aa18.25■□□□□ 0.51
TSPO-204ENST00000428336 SEPT4O43236 478 aa18.25■□□□□ 0.51
TSPO-204ENST00000428336 MCCP23508 829 aa18.25■□□□□ 0.51
TSPO-204ENST00000428336 SLC1A4P43007 532 aa18.25■□□□□ 0.51
TSPO-204ENST00000428336 RBM27Q9P2N5 1060 aaKnown RBP18.25■□□□□ 0.51
TSPO-204ENST00000428336 DNAJC25-GNG10A0A024R161 153 aa18.24■□□□□ 0.51
TSPO-204ENST00000428336 PDE4AP27815 886 aa18.24■□□□□ 0.51
TSPO-204ENST00000428336 HAND2P61296 217 aa18.24■□□□□ 0.51
TSPO-204ENST00000428336 IRX6P78412 446 aaPredicted RBP18.24■□□□□ 0.51
TSPO-204ENST00000428336 CWC27Q6UX04 472 aaKnown RBP18.24■□□□□ 0.51
TSPO-204ENST00000428336 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.24■□□□□ 0.511e-8■■■■□ 26
TSPO-204ENST00000428336 STAG1Q8WVM7 1258 aa18.24■□□□□ 0.51
TSPO-204ENST00000428336 CHMP4CQ96CF2 233 aa18.24■□□□□ 0.51
TSPO-204ENST00000428336 TINF2Q9BSI4 451 aa18.24■□□□□ 0.51
TSPO-204ENST00000428336 TCP11L1Q9NUJ3 509 aa18.24■□□□□ 0.51
TSPO-204ENST00000428336 CTDP1Q9Y5B0 961 aaPredicted RBP18.24■□□□□ 0.51
TSPO-204ENST00000428336 PLA2G6O60733 806 aa18.23■□□□□ 0.51
TSPO-204ENST00000428336 SLC4A3P48751 1232 aa18.23■□□□□ 0.51
TSPO-204ENST00000428336 FXR1P51114 621 aaKnown RBP eCLIP18.23■□□□□ 0.51
TSPO-204ENST00000428336 STAT2P52630 851 aa18.23■□□□□ 0.51
TSPO-204ENST00000428336 OAZ1P54368 228 aa18.23■□□□□ 0.51
TSPO-204ENST00000428336 MFAP1P55081 439 aaKnown RBP18.23■□□□□ 0.51
TSPO-204ENST00000428336 RRP12Q5JTH9 1297 aaKnown RBP18.23■□□□□ 0.51
TSPO-204ENST00000428336 ANO1Q5XXA6 986 aa18.23■□□□□ 0.51
TSPO-204ENST00000428336 RCSD1Q6JBY9 416 aa18.23■□□□□ 0.51
TSPO-204ENST00000428336 KCTD1Q719H9 257 aa18.23■□□□□ 0.51
TSPO-204ENST00000428336 RASGRP2Q7LDG7 609 aa18.23■□□□□ 0.51
TSPO-204ENST00000428336 FAM160B2Q86V87 743 aa18.23■□□□□ 0.51
TSPO-204ENST00000428336 TBC1D10CQ8IV04 446 aa18.23■□□□□ 0.51
TSPO-204ENST00000428336 C7orf61Q8IZ16 206 aa18.23■□□□□ 0.51
TSPO-204ENST00000428336 CHURC1Q8WUH1 139 aa18.23■□□□□ 0.51
TSPO-204ENST00000428336 TOMM22Q9NS69 142 aa18.23■□□□□ 0.51
TSPO-204ENST00000428336 NRBP1Q9UHY1 535 aa18.23■□□□□ 0.51
TSPO-204ENST00000428336 DNM1LO00429 736 aa18.22■□□□□ 0.51
TSPO-204ENST00000428336 FDX1P10109 184 aa18.22■□□□□ 0.51
TSPO-204ENST00000428336 LRRC26Q2I0M4 334 aa18.22■□□□□ 0.51
TSPO-204ENST00000428336 AKNAD1Q5T1N1 836 aa18.22■□□□□ 0.51
TSPO-204ENST00000428336 DIAPH3Q9NSV4 1193 aa18.22■□□□□ 0.51
TSPO-204ENST00000428336 ZNF536O15090 1300 aa18.22■□□□□ 0.51
TSPO-204ENST00000428336 COL11A1P12107 1806 aaPredicted RBP18.21■□□□□ 0.51
TSPO-204ENST00000428336 HIP1O00291 1037 aa18.21■□□□□ 0.51
TSPO-204ENST00000428336 PCP11498 1178 aaKnown RBP18.21■□□□□ 0.51
TSPO-204ENST00000428336 TAL1P17542 331 aaPredicted RBP18.21■□□□□ 0.51
TSPO-204ENST00000428336 MFSD6Q6ZSS7 791 aa18.21■□□□□ 0.51
TSPO-204ENST00000428336 CHST13Q8NET6 341 aa18.21■□□□□ 0.51
TSPO-204ENST00000428336 DDX11Q96FC9 970 aa18.21■□□□□ 0.51
TSPO-204ENST00000428336 SENP6Q9GZR1 1112 aaPredicted RBP18.21■□□□□ 0.51
TSPO-204ENST00000428336 ISY1Q9ULR0 285 aaKnown RBP18.21■□□□□ 0.51
TSPO-204ENST00000428336 ZMYND8Q9ULU4 1186 aaPredicted RBP18.21■□□□□ 0.51
TSPO-204ENST00000428336 MYH4Q9Y623 1939 aa18.2■□□□□ 0.5
TSPO-204ENST00000428336 ZNF865P0CJ78 1059 aaPredicted RBP18.2■□□□□ 0.5
TSPO-204ENST00000428336 GSPT1P15170 499 aaKnown RBP18.2■□□□□ 0.5
TSPO-204ENST00000428336 GJC2Q5T442 439 aaPredicted RBP18.2■□□□□ 0.5
TSPO-204ENST00000428336 ERICH6BQ5W0A0 696 aa18.2■□□□□ 0.5
TSPO-204ENST00000428336 MAMDC4Q6UXC1 1216 aa18.2■□□□□ 0.5
TSPO-204ENST00000428336 MSL3Q8N5Y2 521 aaKnown RBP18.2■□□□□ 0.5
TSPO-204ENST00000428336 ARRDC4Q8NCT1 418 aa18.2■□□□□ 0.5
TSPO-204ENST00000428336 FGD4Q96M96 766 aa18.2■□□□□ 0.5
TSPO-204ENST00000428336 AGBL1Q96MI9 1066 aa18.2■□□□□ 0.5
TSPO-204ENST00000428336 TMEM47Q9BQJ4 181 aa18.2■□□□□ 0.5
TSPO-204ENST00000428336 FBXO40Q9UH90 709 aa18.2■□□□□ 0.5
TSPO-204ENST00000428336 PRR12Q9ULL5 1215 aa18.2■□□□□ 0.5
TSPO-204ENST00000428336 SNAI1O95863 264 aaPredicted RBP18.19■□□□□ 0.5
TSPO-204ENST00000428336 TOP1P11387 765 aaKnown RBP18.19■□□□□ 0.5
TSPO-204ENST00000428336 SNAP25P60880 206 aa18.19■□□□□ 0.5
TSPO-204ENST00000428336 IKQ13123 557 aaPredicted RBP18.19■□□□□ 0.5
TSPO-204ENST00000428336 TTC22Q5TAA0 569 aa18.19■□□□□ 0.5
TSPO-204ENST00000428336 DCAF4Q8WV16 495 aa18.19■□□□□ 0.5
TSPO-204ENST00000428336 GDF15Q99988 308 aa18.19■□□□□ 0.5
TSPO-204ENST00000428336 DSCC1Q9BVC3 393 aa18.19■□□□□ 0.5
TSPO-204ENST00000428336 RNF41Q9H4P4 317 aaPredicted RBP18.19■□□□□ 0.5
TSPO-204ENST00000428336 MTMR7Q9Y216 660 aa18.19■□□□□ 0.5
TSPO-204ENST00000428336 NEDD4P46934 1319 aa18.19■□□□□ 0.5
TSPO-204ENST00000428336 ALPK3Q96L96 1907 aa18.18■□□□□ 0.5
TSPO-204ENST00000428336 ZNF213O14771 459 aa18.18■□□□□ 0.5
TSPO-204ENST00000428336 SYN1P17600 705 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms