RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 MAML3Q96JK9 1138 aa21.83■■□□□ 1.09
PSPC1-202ENST00000427943 SLC5A4Q9NY91 659 aa21.83■■□□□ 1.09
PSPC1-202ENST00000427943 ANAPC4Q9UJX5 808 aa21.83■■□□□ 1.09
PSPC1-202ENST00000427943 SYNPO2Q9UMS6 1093 aa21.83■■□□□ 1.09
PSPC1-202ENST00000427943 TRIOBPQ9H2D6 2365 aa21.83■■□□□ 1.08
PSPC1-202ENST00000427943 HSPD1P10809 573 aaKnown RBP21.82■■□□□ 1.08
PSPC1-202ENST00000427943 KCTD2Q14681 263 aa21.82■■□□□ 1.08
PSPC1-202ENST00000427943 ALX1Q15699 326 aa21.82■■□□□ 1.08
PSPC1-202ENST00000427943 CPXCR1Q8N123 301 aa21.82■■□□□ 1.08
PSPC1-202ENST00000427943 TEX13BQ9BXU2 312 aa21.82■■□□□ 1.08
PSPC1-202ENST00000427943 OSBPL3Q9H4L5 887 aa21.82■■□□□ 1.08
PSPC1-202ENST00000427943 TOMM22Q9NS69 142 aa21.82■■□□□ 1.08
PSPC1-202ENST00000427943 STX8Q9UNK0 236 aa21.82■■□□□ 1.08
PSPC1-202ENST00000427943 RANBP6O60518 1105 aaKnown RBP21.81■■□□□ 1.08
PSPC1-202ENST00000427943 FGAP02671 866 aa21.81■■□□□ 1.08
PSPC1-202ENST00000427943 BMP3P12645 472 aa21.81■■□□□ 1.08
PSPC1-202ENST00000427943 SDSP20132 328 aa21.81■■□□□ 1.08
PSPC1-202ENST00000427943 COPB2P35606 906 aa21.81■■□□□ 1.08
PSPC1-202ENST00000427943 ANO1Q5XXA6 986 aa21.81■■□□□ 1.08
PSPC1-202ENST00000427943 IL17RBQ9NRM6 502 aa21.81■■□□□ 1.08
PSPC1-202ENST00000427943 FEM1BQ9UK73 627 aa21.81■■□□□ 1.08
PSPC1-202ENST00000427943 RIPK3Q9Y572 518 aa21.81■■□□□ 1.08
PSPC1-202ENST00000427943 CTDP1Q9Y5B0 961 aaPredicted RBP21.81■■□□□ 1.08
PSPC1-202ENST00000427943 MSCO60682 206 aa21.8■■□□□ 1.08
PSPC1-202ENST00000427943 ZBED4O75132 1171 aa21.8■■□□□ 1.08
PSPC1-202ENST00000427943 HAND2P61296 217 aa21.8■■□□□ 1.08
PSPC1-202ENST00000427943 RRP12Q5JTH9 1297 aaKnown RBP21.8■■□□□ 1.08
PSPC1-202ENST00000427943 PRAMEF19Q5SWL8 479 aa21.8■■□□□ 1.08
PSPC1-202ENST00000427943 RASGRP2Q7LDG7 609 aa21.8■■□□□ 1.08
PSPC1-202ENST00000427943 TICAM2Q86XR7 235 aa21.8■■□□□ 1.08
PSPC1-202ENST00000427943 RAVER2Q9HCJ3 691 aaKnown RBP21.8■■□□□ 1.08
PSPC1-202ENST00000427943 ZMYM6O95789 1325 aa21.8■■□□□ 1.08
PSPC1-202ENST00000427943 TMEM232C9JQI7 657 aa21.79■■□□□ 1.08
PSPC1-202ENST00000427943 ORC4O43929 436 aa21.79■■□□□ 1.08
PSPC1-202ENST00000427943 COL6A1P12109 1028 aa21.79■■□□□ 1.08
PSPC1-202ENST00000427943 SLC38A10Q9HBR0 1119 aa21.79■■□□□ 1.08
PSPC1-202ENST00000427943 RBM27Q9P2N5 1060 aaKnown RBP21.79■■□□□ 1.08
PSPC1-202ENST00000427943 MTMR7Q9Y216 660 aa21.79■■□□□ 1.08
PSPC1-202ENST00000427943 MCCP23508 829 aa21.78■■□□□ 1.08
PSPC1-202ENST00000427943 SLC1A4P43007 532 aa21.78■■□□□ 1.08
PSPC1-202ENST00000427943 IKQ13123 557 aaPredicted RBP21.78■■□□□ 1.08
PSPC1-202ENST00000427943 ZNF792Q3KQV3 632 aa21.78■■□□□ 1.08
PSPC1-202ENST00000427943 GMCL1Q96IK5 515 aa21.78■■□□□ 1.08
PSPC1-202ENST00000427943 ZMYND8Q9ULU4 1186 aaPredicted RBP21.78■■□□□ 1.08
PSPC1-202ENST00000427943 DNAH12Q6ZR08 3092 aa21.77■■□□□ 1.08
PSPC1-202ENST00000427943 FXR1P51114 621 aaKnown RBP eCLIP21.77■■□□□ 1.08
PSPC1-202ENST00000427943 STAT2P52630 851 aa21.77■■□□□ 1.08
PSPC1-202ENST00000427943 PPP4R3BQ5MIZ7 849 aa21.77■■□□□ 1.08
PSPC1-202ENST00000427943 CWC27Q6UX04 472 aaKnown RBP21.77■■□□□ 1.08
PSPC1-202ENST00000427943 KCTD1Q719H9 257 aa21.77■■□□□ 1.08
PSPC1-202ENST00000427943 DIAPH3Q9NSV4 1193 aa21.77■■□□□ 1.08
PSPC1-202ENST00000427943 ATP2A1O14983 1001 aa21.76■■□□□ 1.07
PSPC1-202ENST00000427943 SEPT4O43236 478 aa21.76■■□□□ 1.07
PSPC1-202ENST00000427943 FGRP09769 529 aa21.76■■□□□ 1.07
PSPC1-202ENST00000427943 SYN1P17600 705 aa21.76■■□□□ 1.07
PSPC1-202ENST00000427943 MFAP1P55081 439 aaKnown RBP21.76■■□□□ 1.07
PSPC1-202ENST00000427943 LRRC26Q2I0M4 334 aa21.76■■□□□ 1.07
PSPC1-202ENST00000427943 TBC1D10CQ8IV04 446 aa21.76■■□□□ 1.07
PSPC1-202ENST00000427943 DDX11Q96FC9 970 aa21.76■■□□□ 1.07
PSPC1-202ENST00000427943 PCDH10Q9P2E7 1040 aa21.76■■□□□ 1.07
PSPC1-202ENST00000427943 LCTP09848 1927 aa21.75■■□□□ 1.07
PSPC1-202ENST00000427943 MYCNP04198 464 aaPredicted RBP21.75■■□□□ 1.07
PSPC1-202ENST00000427943 PDE4AP27815 886 aa21.75■■□□□ 1.07
PSPC1-202ENST00000427943 GJC2Q5T442 439 aaPredicted RBP21.75■■□□□ 1.07
PSPC1-202ENST00000427943 FAM160B2Q86V87 743 aa21.75■■□□□ 1.07
PSPC1-202ENST00000427943 TINF2Q9BSI4 451 aa21.75■■□□□ 1.07
PSPC1-202ENST00000427943 SENP6Q9GZR1 1112 aaPredicted RBP21.75■■□□□ 1.07
PSPC1-202ENST00000427943 PRO3102Q9H379 93 aa21.75■■□□□ 1.07
PSPC1-202ENST00000427943 HOMER2Q9NSB8 354 aa21.75■■□□□ 1.07
PSPC1-202ENST00000427943 DIS3Q9Y2L1 958 aaKnown RBP21.75■■□□□ 1.07
PSPC1-202ENST00000427943 RANBP2P49792 3224 aaKnown RBP21.74■■□□□ 1.07
PSPC1-202ENST00000427943 DNM1LO00429 736 aa21.74■■□□□ 1.07
PSPC1-202ENST00000427943 TAL1P17542 331 aaPredicted RBP21.74■■□□□ 1.07
PSPC1-202ENST00000427943 CCDC96Q2M329 555 aa21.74■■□□□ 1.07
PSPC1-202ENST00000427943 CHURC1Q8WUH1 139 aa21.74■■□□□ 1.07
PSPC1-202ENST00000427943 STAG1Q8WVM7 1258 aa21.74■■□□□ 1.07
PSPC1-202ENST00000427943 LRRC37A2A6NM11 1700 aa21.74■■□□□ 1.07
PSPC1-202ENST00000427943 NOVP48745 357 aa21.73■■□□□ 1.07
PSPC1-202ENST00000427943 OAZ1P54368 228 aa21.73■■□□□ 1.07
PSPC1-202ENST00000427943 SNAP25P60880 206 aa21.73■■□□□ 1.07
PSPC1-202ENST00000427943 AKNAD1Q5T1N1 836 aa21.73■■□□□ 1.07
PSPC1-202ENST00000427943 RCSD1Q6JBY9 416 aa21.73■■□□□ 1.07
PSPC1-202ENST00000427943 NEDD4P46934 1319 aa21.73■■□□□ 1.07
PSPC1-202ENST00000427943 DNAJC25-GNG10A0A024R161 153 aa21.72■■□□□ 1.07
PSPC1-202ENST00000427943 ATN1P54259 1190 aaPredicted RBP21.72■■□□□ 1.07
PSPC1-202ENST00000427943 MFSD6Q6ZSS7 791 aa21.72■■□□□ 1.07
PSPC1-202ENST00000427943 ANKRD35Q8N283 1001 aa21.72■■□□□ 1.07
PSPC1-202ENST00000427943 AGBL1Q96MI9 1066 aa21.72■■□□□ 1.07
PSPC1-202ENST00000427943 TMEM47Q9BQJ4 181 aa21.72■■□□□ 1.07
PSPC1-202ENST00000427943 LTBP2Q14767 1821 aa21.71■■□□□ 1.07
PSPC1-202ENST00000427943 KBTBD13C9JR72 458 aa21.71■■□□□ 1.07
PSPC1-202ENST00000427943 HIP1O00291 1037 aa21.71■■□□□ 1.07
PSPC1-202ENST00000427943 FDX1P10109 184 aa21.71■■□□□ 1.07
PSPC1-202ENST00000427943 GSPT1P15170 499 aaKnown RBP21.71■■□□□ 1.07
PSPC1-202ENST00000427943 CCDC174Q6PII3 467 aa21.71■■□□□ 1.07
PSPC1-202ENST00000427943 ARRDC4Q8NCT1 418 aa21.71■■□□□ 1.07
PSPC1-202ENST00000427943 CHST13Q8NET6 341 aa21.71■■□□□ 1.07
PSPC1-202ENST00000427943 LENG1Q96BZ8 264 aaPredicted RBP21.71■■□□□ 1.07
PSPC1-202ENST00000427943 RNF146Q9NTX7 359 aa21.71■■□□□ 1.07
PSPC1-202ENST00000427943 FBXO40Q9UH90 709 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms