RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 ZNF341Q9BYN7 854 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 DNAJC18Q9H819 358 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 NID2Q14112 1375 aa9.6□□□□□ -0.87
SMARCAL1-206ENST00000427645 SIPA1L1O43166 1804 aa9.59□□□□□ -0.87
SMARCAL1-206ENST00000427645 FMNL1O95466 1100 aaPredicted RBP9.59□□□□□ -0.87
SMARCAL1-206ENST00000427645 OSBPP22059 807 aa9.59□□□□□ -0.87
SMARCAL1-206ENST00000427645 SMARCA1P28370 1054 aa9.59□□□□□ -0.87
SMARCAL1-206ENST00000427645 GJB2P29033 226 aa9.59□□□□□ -0.87
SMARCAL1-206ENST00000427645 ADD1P35611 737 aaKnown RBP9.59□□□□□ -0.87
SMARCAL1-206ENST00000427645 CAP2P40123 477 aa9.59□□□□□ -0.87
SMARCAL1-206ENST00000427645 MNX1P50219 401 aaPredicted RBP9.59□□□□□ -0.87
SMARCAL1-206ENST00000427645 PPATQ06203 517 aa9.59□□□□□ -0.87
SMARCAL1-206ENST00000427645 MOGSQ13724 837 aa9.59□□□□□ -0.87
SMARCAL1-206ENST00000427645 MICU3Q86XE3 530 aa9.59□□□□□ -0.87
SMARCAL1-206ENST00000427645 FAM184AQ8NB25 1140 aa9.59□□□□□ -0.87
SMARCAL1-206ENST00000427645 SMARCC2Q8TAQ2 1214 aa9.59□□□□□ -0.87
SMARCAL1-206ENST00000427645 SHISA4Q96DD7 197 aa9.59□□□□□ -0.87
SMARCAL1-206ENST00000427645 SENP2Q9HC62 589 aa9.59□□□□□ -0.87
SMARCAL1-206ENST00000427645 ARHGEF10LQ9HCE6 1279 aa9.59□□□□□ -0.87
SMARCAL1-206ENST00000427645 RBM27Q9P2N5 1060 aaKnown RBP9.59□□□□□ -0.87
SMARCAL1-206ENST00000427645 CLIP2Q9UDT6 1046 aa9.59□□□□□ -0.87
SMARCAL1-206ENST00000427645 SZT2Q5T011 3432 aa9.59□□□□□ -0.87
SMARCAL1-206ENST00000427645 FAM196BA6NMK8 535 aa9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 PHF20L1A8MW92 1017 aa9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 GH2P01242 217 aa9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 EEF2P13639 858 aaKnown RBP9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 IFNAR1P17181 557 aa9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 DDIT3P35638 169 aa9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 AKAP17AQ02040 695 aaKnown RBP9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 SSRP1Q08945 709 aaKnown RBP9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 GSE1Q14687 1217 aa9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 RAB3GAP1Q15042 981 aa9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 LARP1BQ659C4 914 aaKnown RBP9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 GPAT2Q6NUI2 795 aa9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 ANKRD23Q86SG2 305 aa9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 CCDC84Q86UT8 332 aaPredicted RBP9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 TRIM22Q8IYM9 498 aa9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 NSUN7Q8NE18 718 aaKnown RBP9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 WASF1Q92558 559 aa9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 DPF3Q92784 378 aa9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 SH2D4AQ9H788 454 aa9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 BIN2Q9UBW5 565 aaPredicted RBP9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 SRRDQ9UH36 339 aa9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 ZNF112Q9UJU3 913 aa9.58□□□□□ -0.88
SMARCAL1-206ENST00000427645 GDF11O95390 407 aa9.57□□□□□ -0.88
SMARCAL1-206ENST00000427645 PARP1P09874 1014 aaKnown RBP9.57□□□□□ -0.88
SMARCAL1-206ENST00000427645 CDC27P30260 824 aa9.57□□□□□ -0.88
SMARCAL1-206ENST00000427645 ICA1Q05084 483 aa9.57□□□□□ -0.88
SMARCAL1-206ENST00000427645 PRKCZQ05513 592 aa9.57□□□□□ -0.88
SMARCAL1-206ENST00000427645 ST3GAL1Q11201 340 aa9.57□□□□□ -0.88
SMARCAL1-206ENST00000427645 GRM4Q14833 912 aa9.57□□□□□ -0.88
SMARCAL1-206ENST00000427645 SEPT2Q15019 361 aa9.57□□□□□ -0.88
SMARCAL1-206ENST00000427645 NTRK3Q16288 839 aa9.57□□□□□ -0.88
SMARCAL1-206ENST00000427645 ASPRV1Q53RT3 343 aa9.57□□□□□ -0.88
SMARCAL1-206ENST00000427645 CCDC144CPQ8IYA2 1237 aa9.57□□□□□ -0.88
SMARCAL1-206ENST00000427645 RAET1EQ8TD07 263 aa9.57□□□□□ -0.88
SMARCAL1-206ENST00000427645 MYL10Q9BUA6 226 aa9.57□□□□□ -0.88
SMARCAL1-206ENST00000427645 RNF26Q9BY78 433 aaPredicted RBP9.57□□□□□ -0.88
SMARCAL1-206ENST00000427645 NCOA5Q9HCD5 579 aaKnown RBP9.57□□□□□ -0.88
SMARCAL1-206ENST00000427645 ZCCHC17Q9NP64 241 aaKnown RBP9.57□□□□□ -0.88
SMARCAL1-206ENST00000427645 FAM217BQ9NTX9 383 aaPredicted RBP9.57□□□□□ -0.88
SMARCAL1-206ENST00000427645 ORC3Q9UBD5 711 aaPredicted RBP9.57□□□□□ -0.88
SMARCAL1-206ENST00000427645 GABRQQ9UN88 632 aa9.57□□□□□ -0.88
SMARCAL1-206ENST00000427645 KCNH4Q9UQ05 1017 aa9.57□□□□□ -0.88
SMARCAL1-206ENST00000427645 ZHX2Q9Y6X8 837 aa9.57□□□□□ -0.88
SMARCAL1-206ENST00000427645 MYPNQ86TC9 1320 aa9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 ADGRA2Q96PE1 1338 aa9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 STK36Q9NRP7 1315 aa9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 GREB1LQ9C091 1923 aaPredicted RBP9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 KIAA0100Q14667 2235 aaKnown RBP9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 PTPDC1A2A3K4 754 aa9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 PALM3A6NDB9 673 aaPredicted RBP9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 PRPF3O43395 683 aaKnown RBP9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 DEXIO95424 95 aa9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 CTDNEP1O95476 244 aa9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 CCL5P13501 91 aa9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 XBP1P17861 261 aa9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 RXRAP19793 462 aa9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 SYT1P21579 422 aa9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 GRK4P32298 578 aa9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 GUCY1A2P33402 732 aa9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 ATP2B2Q01814 1243 aa9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 GPATCH4Q5T3I0 446 aaKnown RBP9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 GMCL1P1Q8NEA9 526 aa9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 DCAF4Q8WV16 495 aa9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 AS3MTQ9HBK9 375 aa9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 GOPCQ9HD26 462 aa9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 ZBTB21Q9ULJ3 1066 aa9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 TMX2Q9Y320 296 aa9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 MYH4Q9Y623 1939 aa9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 RANBP2P49792 3224 aaKnown RBP9.56□□□□□ -0.88
SMARCAL1-206ENST00000427645 USP17L5A8MUK1 530 aa9.55□□□□□ -0.88
SMARCAL1-206ENST00000427645 F5H6K3 240 aa9.55□□□□□ -0.88
SMARCAL1-206ENST00000427645 H3BQV1 296 aa9.55□□□□□ -0.88
SMARCAL1-206ENST00000427645 STX6O43752 255 aa9.55□□□□□ -0.88
SMARCAL1-206ENST00000427645 GNRH1P01148 92 aa9.55□□□□□ -0.88
SMARCAL1-206ENST00000427645 SNHG28P0DPA3 235 aa9.55□□□□□ -0.88
SMARCAL1-206ENST00000427645 PDHBP11177 359 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms