RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 MKI67P46013 3256 aaKnown RBP21.81■■□□□ 1.08
GPC1-205ENST00000427506 ZMYM6O95789 1325 aa21.8■■□□□ 1.08
GPC1-205ENST00000427506 MYH4Q9Y623 1939 aa21.8■■□□□ 1.08
GPC1-205ENST00000427506 EVI5O60447 810 aa21.8■■□□□ 1.08
GPC1-205ENST00000427506 NMT2O60551 498 aa21.8■■□□□ 1.08
GPC1-205ENST00000427506 SLC1A4P43007 532 aa21.8■■□□□ 1.08
GPC1-205ENST00000427506 SNRNP48Q6IEG0 339 aaKnown RBP21.8■■□□□ 1.08
GPC1-205ENST00000427506 IL17RBQ9NRM6 502 aa21.8■■□□□ 1.08
GPC1-205ENST00000427506 ZNF236Q9UL36 1845 aa21.79■■□□□ 1.08
GPC1-205ENST00000427506 TMEM232C9JQI7 657 aa21.79■■□□□ 1.08
GPC1-205ENST00000427506 LHX8Q68G74 356 aa21.79■■□□□ 1.08
GPC1-205ENST00000427506 C11orf49Q9H6J7 331 aa21.79■■□□□ 1.08
GPC1-205ENST00000427506 MTMR7Q9Y216 660 aa21.79■■□□□ 1.08
GPC1-205ENST00000427506 COL11A1P12107 1806 aaPredicted RBP21.78■■□□□ 1.08
GPC1-205ENST00000427506 MSCO60682 206 aa21.78■■□□□ 1.08
GPC1-205ENST00000427506 PGK2P07205 417 aa21.78■■□□□ 1.08
GPC1-205ENST00000427506 FGRP09769 529 aa21.78■■□□□ 1.08
GPC1-205ENST00000427506 MCCP23508 829 aa21.78■■□□□ 1.08
GPC1-205ENST00000427506 PDE4AP27815 886 aa21.78■■□□□ 1.08
GPC1-205ENST00000427506 STAT2P52630 851 aa21.78■■□□□ 1.08
GPC1-205ENST00000427506 MFSD6Q6ZSS7 791 aa21.78■■□□□ 1.08
GPC1-205ENST00000427506 GMCL1Q96IK5 515 aa21.78■■□□□ 1.08
GPC1-205ENST00000427506 MAML3Q96JK9 1138 aa21.78■■□□□ 1.08
GPC1-205ENST00000427506 RAVER2Q9HCJ3 691 aaKnown RBP21.78■■□□□ 1.08
GPC1-205ENST00000427506 DDX20Q9UHI6 824 aaKnown RBP21.78■■□□□ 1.08
GPC1-205ENST00000427506 FAM160B2Q86V87 743 aa21.77■■□□□ 1.08
GPC1-205ENST00000427506 CHURC1Q8WUH1 139 aa21.77■■□□□ 1.08
GPC1-205ENST00000427506 SLC38A10Q9HBR0 1119 aa21.77■■□□□ 1.08
GPC1-205ENST00000427506 ZNF213O14771 459 aa21.76■■□□□ 1.07
GPC1-205ENST00000427506 ATP2A1O14983 1001 aa21.76■■□□□ 1.07
GPC1-205ENST00000427506 CYBAP13498 195 aa21.76■■□□□ 1.07
GPC1-205ENST00000427506 AKNAD1Q5T1N1 836 aa21.76■■□□□ 1.07
GPC1-205ENST00000427506 TRPV1Q8NER1 839 aa21.76■■□□□ 1.07
GPC1-205ENST00000427506 DDX11Q96FC9 970 aa21.76■■□□□ 1.07
GPC1-205ENST00000427506 RNF41Q9H4P4 317 aaPredicted RBP21.76■■□□□ 1.07
GPC1-205ENST00000427506 RIPK3Q9Y572 518 aa21.76■■□□□ 1.07
GPC1-205ENST00000427506 IGHA2P01877 340 aa21.75■■□□□ 1.07
GPC1-205ENST00000427506 FDX1P10109 184 aa21.75■■□□□ 1.07
GPC1-205ENST00000427506 PCP11498 1178 aaKnown RBP21.75■■□□□ 1.07
GPC1-205ENST00000427506 MNX1P50219 401 aaPredicted RBP21.75■■□□□ 1.07
GPC1-205ENST00000427506 CCDC96Q2M329 555 aa21.75■■□□□ 1.07
GPC1-205ENST00000427506 PRAMEF19Q5SWL8 479 aa21.75■■□□□ 1.07
GPC1-205ENST00000427506 TTC22Q5TAA0 569 aa21.75■■□□□ 1.07
GPC1-205ENST00000427506 RCSD1Q6JBY9 416 aa21.75■■□□□ 1.07
GPC1-205ENST00000427506 KCTD1Q719H9 257 aa21.75■■□□□ 1.07
GPC1-205ENST00000427506 STAG1Q8WVM7 1258 aa21.75■■□□□ 1.07
GPC1-205ENST00000427506 OAZ1P54368 228 aa21.74■■□□□ 1.07
GPC1-205ENST00000427506 ZNF792Q3KQV3 632 aa21.74■■□□□ 1.07
GPC1-205ENST00000427506 HABP4Q5JVS0 413 aaKnown RBP21.74■■□□□ 1.07
GPC1-205ENST00000427506 TBC1D10CQ8IV04 446 aa21.74■■□□□ 1.07
GPC1-205ENST00000427506 COLQQ9Y215 455 aaPredicted RBP21.74■■□□□ 1.07
GPC1-205ENST00000427506 DIS3Q9Y2L1 958 aaKnown RBP21.74■■□□□ 1.07
GPC1-205ENST00000427506 TOP1P11387 765 aaKnown RBP21.73■■□□□ 1.07
GPC1-205ENST00000427506 ANKRD35Q8N283 1001 aa21.73■■□□□ 1.07
GPC1-205ENST00000427506 ESR2Q92731 530 aa21.73■■□□□ 1.07
GPC1-205ENST00000427506 TCP11L1Q9NUJ3 509 aa21.73■■□□□ 1.07
GPC1-205ENST00000427506 FBXO40Q9UH90 709 aa21.73■■□□□ 1.07
GPC1-205ENST00000427506 SEPT4O43236 478 aa21.72■■□□□ 1.07
GPC1-205ENST00000427506 GSPT1P15170 499 aaKnown RBP21.72■■□□□ 1.07
GPC1-205ENST00000427506 NOVP48745 357 aa21.72■■□□□ 1.07
GPC1-205ENST00000427506 ANO1Q5XXA6 986 aa21.72■■□□□ 1.07
GPC1-205ENST00000427506 CHRDL2Q6WN34 429 aa21.72■■□□□ 1.07
GPC1-205ENST00000427506 C7orf61Q8IZ16 206 aa21.72■■□□□ 1.07
GPC1-205ENST00000427506 CHST13Q8NET6 341 aa21.72■■□□□ 1.07
GPC1-205ENST00000427506 DCAF4Q8WV16 495 aa21.72■■□□□ 1.07
GPC1-205ENST00000427506 TMEM47Q9BQJ4 181 aa21.72■■□□□ 1.07
GPC1-205ENST00000427506 TINF2Q9BSI4 451 aa21.72■■□□□ 1.07
GPC1-205ENST00000427506 DSCC1Q9BVC3 393 aa21.72■■□□□ 1.07
GPC1-205ENST00000427506 HOMER2Q9NSB8 354 aa21.72■■□□□ 1.07
GPC1-205ENST00000427506 PLA2G6O60733 806 aa21.71■■□□□ 1.07
GPC1-205ENST00000427506 MYCNP04198 464 aaPredicted RBP21.71■■□□□ 1.07
GPC1-205ENST00000427506 IMMTQ16891 758 aaKnown RBP21.71■■□□□ 1.07
GPC1-205ENST00000427506 RASGRP2Q7LDG7 609 aa21.71■■□□□ 1.07
GPC1-205ENST00000427506 CTNNA3Q9UI47 895 aa21.71■■□□□ 1.07
GPC1-205ENST00000427506 PFASO15067 1338 aa21.71■■□□□ 1.07
GPC1-205ENST00000427506 COL6A1P12109 1028 aa21.7■■□□□ 1.06
GPC1-205ENST00000427506 SNAP25P60880 206 aa21.7■■□□□ 1.06
GPC1-205ENST00000427506 CCDC174Q6PII3 467 aa21.7■■□□□ 1.06
GPC1-205ENST00000427506 ARRDC4Q8NCT1 418 aa21.7■■□□□ 1.06
GPC1-205ENST00000427506 TTC14Q96N46 770 aa21.7■■□□□ 1.06
GPC1-205ENST00000427506 SENP6Q9GZR1 1112 aaPredicted RBP21.7■■□□□ 1.06
GPC1-205ENST00000427506 NRBP1Q9UHY1 535 aa21.7■■□□□ 1.06
GPC1-205ENST00000427506 PRR12Q9ULL5 1215 aa21.7■■□□□ 1.06
GPC1-205ENST00000427506 CNPY2Q9Y2B0 182 aa21.7■■□□□ 1.06
GPC1-205ENST00000427506 NEDD4P46934 1319 aa21.7■■□□□ 1.06
GPC1-205ENST00000427506 GJC2Q5T442 439 aaPredicted RBP21.69■■□□□ 1.06
GPC1-205ENST00000427506 RUFY2Q8WXA3 655 aa21.69■■□□□ 1.06
GPC1-205ENST00000427506 AGBL1Q96MI9 1066 aa21.69■■□□□ 1.06
GPC1-205ENST00000427506 ZKSCAN3Q9BRR0 538 aa21.69■■□□□ 1.06
GPC1-205ENST00000427506 ACAD9Q9H845 621 aa21.69■■□□□ 1.06
GPC1-205ENST00000427506 GPCPD1Q9NPB8 672 aa21.69■■□□□ 1.06
GPC1-205ENST00000427506 FRMPD2Q68DX3 1309 aaPredicted RBP21.69■■□□□ 1.06
GPC1-205ENST00000427506 ZNFX1Q9P2E3 1918 aaKnown RBP21.68■■□□□ 1.06
GPC1-205ENST00000427506 DNM1LO00429 736 aa21.68■■□□□ 1.06
GPC1-205ENST00000427506 SLC34A2O95436 690 aa21.68■■□□□ 1.06
GPC1-205ENST00000427506 ALAS1P13196 640 aa21.68■■□□□ 1.06
GPC1-205ENST00000427506 RNF146Q9NTX7 359 aa21.68■■□□□ 1.06
GPC1-205ENST00000427506 ZNF536O15090 1300 aa21.67■■□□□ 1.06
GPC1-205ENST00000427506 DNAJC25-GNG10A0A024R161 153 aa21.67■■□□□ 1.06
GPC1-205ENST00000427506 KBTBD13C9JR72 458 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms