RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 TUBB4BP68371 445 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 CCDC178Q5BJE1 867 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 APTXQ7Z2E3 356 aaKnown RBP8.38□□□□□ -1.07
LINC01108-201ENST00000427276 LRRC1Q9BTT6 524 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 LRWD1Q9UFC0 647 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 DMGDHQ9UI17 866 aaKnown RBP8.38□□□□□ -1.07
LINC01108-201ENST00000427276 MYO1FO00160 1098 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 BUB1O43683 1085 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 MAP2K2P36507 400 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 KRT83P78385 493 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 MCTP2Q6DN12 878 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 LRP10Q7Z4F1 713 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 MAATS1Q7Z4T9 603 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 CCDC91Q7Z6B0 441 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 LCORLQ8N3X6 602 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 RASGRP4Q8TDF6 673 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 TANGO6Q9C0B7 1094 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 MMRN2Q9H8L6 949 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 MLXIPQ9HAP2 919 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 EPB41L4AQ9HCS5 686 aaPredicted RBP8.38□□□□□ -1.07
LINC01108-201ENST00000427276 REXO2Q9Y3B8 237 aaKnown RBP8.38□□□□□ -1.07
LINC01108-201ENST00000427276 TNKSO95271 1327 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 PP2D1A8MPX8 630 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 NCK2O43639 380 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 CIAO1O76071 339 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 MOCS3O95396 460 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 KRT14P02533 472 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 IFIT1BQ5T764 474 aaKnown RBP8.38□□□□□ -1.07
LINC01108-201ENST00000427276 CDKAL1Q5VV42 579 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 TRAPPC11Q7Z392 1133 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 CEP57Q86XR8 500 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 KAT2BQ92831 832 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 ARL8AQ96BM9 186 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 CNNM2Q9H8M5 875 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 FAM207AQ9NSI2 230 aaPredicted RBP8.38□□□□□ -1.07
LINC01108-201ENST00000427276 UBR1Q8IWV7 1749 aa8.38□□□□□ -1.07
LINC01108-201ENST00000427276 MYH15Q9Y2K3 1946 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 FAM237AA0A1B0GTK4 181 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 RCCD1A6NED2 376 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 RPN1P04843 607 aaKnown RBP8.37□□□□□ -1.07
LINC01108-201ENST00000427276 HNRNPH1P31943 449 aaKnown RBP8.37□□□□□ -1.07
LINC01108-201ENST00000427276 PAFAH1B1P43034 410 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 ARID5AQ03989 594 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 TDRD12Q587J7 1177 aaKnown RBP8.37□□□□□ -1.07
LINC01108-201ENST00000427276 IQCEQ6IPM2 695 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 NFRKBQ6P4R8 1299 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 CCNI2Q6ZMN8 369 aaPredicted RBP8.37□□□□□ -1.07
LINC01108-201ENST00000427276 CATIPQ7Z7H3 387 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 FBXL16Q8N461 479 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 CSGALNACT2Q8N6G5 542 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 NCAPGQ9BPX3 1015 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 AATFQ9NY61 560 aaKnown RBP eCLIP8.37□□□□□ -1.07
LINC01108-201ENST00000427276 KDM3BQ7LBC6 1761 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 BACH1O14867 736 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 TOM1O60784 492 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 ECM2O94769 699 aaPredicted RBP8.37□□□□□ -1.07
LINC01108-201ENST00000427276 PLEKP08567 350 aaPredicted RBP8.37□□□□□ -1.07
LINC01108-201ENST00000427276 CYP7A1P22680 504 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 LIFRP42702 1097 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 HERVK_113P62684 666 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 AMPD2Q01433 879 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 PPFIA1Q13136 1202 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 HLTFQ14527 1009 aaKnown RBP eCLIP8.37□□□□□ -1.07
LINC01108-201ENST00000427276 ODF2Q5BJF6 829 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 NT5DC1Q5TFE4 455 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 WDR93Q6P2C0 686 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 C2CD5Q86YS7 1000 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 NHEJ1Q9H9Q4 299 aaPredicted RBP8.37□□□□□ -1.07
LINC01108-201ENST00000427276 PPANQ9NQ55 473 aaKnown RBP8.37□□□□□ -1.07
LINC01108-201ENST00000427276 MYO1AQ9UBC5 1043 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 TACC3Q9Y6A5 838 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 XDHP47989 1333 aa8.37□□□□□ -1.07
LINC01108-201ENST00000427276 USO1O60763 962 aaKnown RBP8.36□□□□□ -1.07
LINC01108-201ENST00000427276 TACC1O75410 805 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 USP8P40818 1118 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 UBA7P41226 1012 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 GUCY1A3Q02108 690 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 SGMS1Q86VZ5 419 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 PROSER2Q86WR7 435 aaPredicted RBP8.36□□□□□ -1.07
LINC01108-201ENST00000427276 MB21D1Q8N884 522 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 SPATA5Q8NB90 893 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 TTLL11Q8NHH1 800 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 GIMAP7Q8NHV1 300 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 LTN1O94822 1766 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 MARF1Q9Y4F3 1742 aaKnown RBP8.36□□□□□ -1.07
LINC01108-201ENST00000427276 MED1Q15648 1581 aaPredicted RBP8.36□□□□□ -1.07
LINC01108-201ENST00000427276 KDM6AO15550 1401 aaPredicted RBP8.36□□□□□ -1.07
LINC01108-201ENST00000427276 IRS4O14654 1257 aaPredicted RBP8.36□□□□□ -1.07
LINC01108-201ENST00000427276 PSMA7O14818 248 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 OPA1O60313 960 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 PRPF6O94906 941 aaKnown RBP8.36□□□□□ -1.07
LINC01108-201ENST00000427276 PBX1P40424 430 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 PMS1P54277 932 aaKnown RBP8.36□□□□□ -1.07
LINC01108-201ENST00000427276 APBA1Q02410 837 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 TRIM14Q14142 442 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 UBE3CQ15386 1083 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 CT47A1Q5JQC4 288 aaPredicted RBP8.36□□□□□ -1.07
LINC01108-201ENST00000427276 C8orf74Q6P047 294 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 GBP6Q6ZN66 633 aa8.36□□□□□ -1.07
LINC01108-201ENST00000427276 ZNF579Q8NAF0 562 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms