RNA–Protein interactions for RNA: ENST00000427174.5

RPUSD3-205, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-205ENST00000427174 FRMPD2Q68DX3 1309 aaPredicted RBP25.18■■□□□ 1.62
RPUSD3-205ENST00000427174 ATP2A1O14983 1001 aa25.18■■□□□ 1.62
RPUSD3-205ENST00000427174 LIFRP42702 1097 aa25.18■■□□□ 1.62
RPUSD3-205ENST00000427174 TROAPQ12815 778 aa25.18■■□□□ 1.62
RPUSD3-205ENST00000427174 PKN2Q16513 984 aaKnown RBP25.18■■□□□ 1.62
RPUSD3-205ENST00000427174 GPATCH4Q5T3I0 446 aaKnown RBP25.18■■□□□ 1.62
RPUSD3-205ENST00000427174 SAMD1Q6SPF0 538 aaPredicted RBP25.18■■□□□ 1.62
RPUSD3-205ENST00000427174 KIFC2Q96AC6 838 aa25.18■■□□□ 1.62
RPUSD3-205ENST00000427174 EIF5BO60841 1220 aaKnown RBP25.17■■□□□ 1.62
RPUSD3-205ENST00000427174 ECM2O94769 699 aaPredicted RBP25.17■■□□□ 1.62
RPUSD3-205ENST00000427174 FMNL1O95466 1100 aaPredicted RBP25.17■■□□□ 1.62
RPUSD3-205ENST00000427174 HMGB1P09429 215 aaKnown RBP25.17■■□□□ 1.62
RPUSD3-205ENST00000427174 FDX1P10109 184 aa25.17■■□□□ 1.62
RPUSD3-205ENST00000427174 MAPK4P31152 587 aa25.17■■□□□ 1.62
RPUSD3-205ENST00000427174 CCNA1P78396 465 aa25.17■■□□□ 1.62
RPUSD3-205ENST00000427174 SHCBP1Q8NEM2 672 aa25.17■■□□□ 1.62
RPUSD3-205ENST00000427174 JAKMIP1Q96N16 626 aaKnown RBP25.17■■□□□ 1.62
RPUSD3-205ENST00000427174 MCOLN1Q9GZU1 580 aa25.17■■□□□ 1.62
RPUSD3-205ENST00000427174 SRRDQ9UH36 339 aa25.17■■□□□ 1.62
RPUSD3-205ENST00000427174 PRR12Q9ULL5 1215 aa25.17■■□□□ 1.62
RPUSD3-205ENST00000427174 PTPN22Q9Y2R2 807 aa25.17■■□□□ 1.62
RPUSD3-205ENST00000427174 TNPO2O14787 897 aaKnown RBP25.16■■□□□ 1.62
RPUSD3-205ENST00000427174 ASPRV1Q53RT3 343 aa25.16■■□□□ 1.62
RPUSD3-205ENST00000427174 SGMS1Q86VZ5 419 aa25.16■■□□□ 1.62
RPUSD3-205ENST00000427174 IL17RAQ96F46 866 aa25.16■■□□□ 1.62
RPUSD3-205ENST00000427174 LRRC2Q9BYS8 371 aa25.16■■□□□ 1.62
RPUSD3-205ENST00000427174 GPCPD1Q9NPB8 672 aa25.16■■□□□ 1.62
RPUSD3-205ENST00000427174 GJD2Q9UKL4 321 aa25.16■■□□□ 1.62
RPUSD3-205ENST00000427174 ZNF536O15090 1300 aa25.15■■□□□ 1.62
RPUSD3-205ENST00000427174 PLXNA1Q9UIW2 1896 aa25.15■■□□□ 1.62
RPUSD3-205ENST00000427174 GOLGA8HP0CJ92 632 aa25.15■■□□□ 1.62
RPUSD3-205ENST00000427174 SLC16A2P36021 539 aa25.15■■□□□ 1.62
RPUSD3-205ENST00000427174 PRMT2P55345 433 aa25.15■■□□□ 1.62
RPUSD3-205ENST00000427174 FBXO46Q6PJ61 603 aaPredicted RBP25.15■■□□□ 1.62
RPUSD3-205ENST00000427174 RIOX2Q8IUF8 465 aa25.15■■□□□ 1.62
RPUSD3-205ENST00000427174 TMTC2Q8N394 836 aa25.15■■□□□ 1.62
RPUSD3-205ENST00000427174 TCEANC2Q96MN5 208 aa25.15■■□□□ 1.62
RPUSD3-205ENST00000427174 MAD2L2Q9UI95 211 aa25.15■■□□□ 1.62
RPUSD3-205ENST00000427174 ISY1Q9ULR0 285 aaKnown RBP25.15■■□□□ 1.62
RPUSD3-205ENST00000427174 ZBED4O75132 1171 aa25.14■■□□□ 1.62
RPUSD3-205ENST00000427174 CPA1P15085 419 aa25.14■■□□□ 1.62
RPUSD3-205ENST00000427174 STAT3P40763 770 aa25.14■■□□□ 1.62
RPUSD3-205ENST00000427174 OAZ1P54368 228 aa25.14■■□□□ 1.62
RPUSD3-205ENST00000427174 GRM4Q14833 912 aa25.14■■□□□ 1.62
RPUSD3-205ENST00000427174 SYDE2Q5VT97 1194 aa25.14■■□□□ 1.62
RPUSD3-205ENST00000427174 GPR142Q7Z601 462 aa25.14■■□□□ 1.62
RPUSD3-205ENST00000427174 ZNF654Q8IZM8 581 aa25.14■■□□□ 1.62
RPUSD3-205ENST00000427174 TM6SF1Q9BZW5 370 aa25.14■■□□□ 1.62
RPUSD3-205ENST00000427174 RANBP17Q9H2T7 1088 aaKnown RBP25.14■■□□□ 1.62
RPUSD3-205ENST00000427174 GABRQQ9UN88 632 aa25.14■■□□□ 1.62
RPUSD3-205ENST00000427174 PALM3A6NDB9 673 aaPredicted RBP25.13■■□□□ 1.61
RPUSD3-205ENST00000427174 PARP1P09874 1014 aaKnown RBP25.13■■□□□ 1.61
RPUSD3-205ENST00000427174 HOXD10P28358 340 aa25.13■■□□□ 1.61
RPUSD3-205ENST00000427174 PRKCZQ05513 592 aa25.13■■□□□ 1.61
RPUSD3-205ENST00000427174 IKQ13123 557 aaPredicted RBP25.13■■□□□ 1.61
RPUSD3-205ENST00000427174 BLOC1S2Q6QNY1 142 aa25.13■■□□□ 1.61
RPUSD3-205ENST00000427174 STAG2Q8N3U4 1231 aa25.13■■□□□ 1.61
RPUSD3-205ENST00000427174 FBXL16Q8N461 479 aa25.13■■□□□ 1.61
RPUSD3-205ENST00000427174 USP6NLQ92738 828 aa25.13■■□□□ 1.61
RPUSD3-205ENST00000427174 COA7Q96BR5 231 aa25.13■■□□□ 1.61
RPUSD3-205ENST00000427174 MAP3K14Q99558 947 aa25.13■■□□□ 1.61
RPUSD3-205ENST00000427174 TEX13BQ9BXU2 312 aa25.13■■□□□ 1.61
RPUSD3-205ENST00000427174 ZSWIM6Q9HCJ5 1215 aa25.13■■□□□ 1.61
RPUSD3-205ENST00000427174 SLC25A27O95847 323 aa25.12■■□□□ 1.61
RPUSD3-205ENST00000427174 ERCC3P19447 782 aa25.12■■□□□ 1.61
RPUSD3-205ENST00000427174 RPS6KB1P23443 525 aa25.12■■□□□ 1.61
RPUSD3-205ENST00000427174 PSMA5P28066 241 aa25.12■■□□□ 1.61
RPUSD3-205ENST00000427174 ANAPC15P60006 121 aa25.12■■□□□ 1.61
RPUSD3-205ENST00000427174 PLS1Q14651 629 aa25.12■■□□□ 1.61
RPUSD3-205ENST00000427174 MORN1Q5T089 497 aa25.12■■□□□ 1.61
RPUSD3-205ENST00000427174 PLEKHH3Q7Z736 793 aa25.12■■□□□ 1.61
RPUSD3-205ENST00000427174 CATIPQ7Z7H3 387 aa25.12■■□□□ 1.61
RPUSD3-205ENST00000427174 AGXT2Q9BYV1 514 aa25.12■■□□□ 1.61
RPUSD3-205ENST00000427174 CPVLQ9H3G5 476 aa25.12■■□□□ 1.61
RPUSD3-205ENST00000427174 MROH8Q9H579 483 aa25.12■■□□□ 1.61
RPUSD3-205ENST00000427174 RAVER2Q9HCJ3 691 aaKnown RBP25.12■■□□□ 1.61
RPUSD3-205ENST00000427174 RIPK3Q9Y572 518 aa25.12■■□□□ 1.61
RPUSD3-205ENST00000427174 PTCH2Q9Y6C5 1203 aa25.12■■□□□ 1.61
RPUSD3-205ENST00000427174 DDAH1O94760 285 aa25.11■■□□□ 1.61
RPUSD3-205ENST00000427174 CASTP20810 708 aaKnown RBP25.11■■□□□ 1.61
RPUSD3-205ENST00000427174 FLT3LGP49771 235 aa25.11■■□□□ 1.61
RPUSD3-205ENST00000427174 SNRNP48Q6IEG0 339 aaKnown RBP25.11■■□□□ 1.61
RPUSD3-205ENST00000427174 UBA5Q9GZZ9 404 aa25.11■■□□□ 1.61
RPUSD3-205ENST00000427174 PTPREP23469 700 aa25.1■■□□□ 1.61
RPUSD3-205ENST00000427174 SNAP25P60880 206 aa25.1■■□□□ 1.61
RPUSD3-205ENST00000427174 IRF5Q13568 498 aa25.1■■□□□ 1.61
RPUSD3-205ENST00000427174 SLC35G1Q2M3R5 365 aa25.1■■□□□ 1.61
RPUSD3-205ENST00000427174 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.1■■□□□ 1.61
RPUSD3-205ENST00000427174 CPXCR1Q8N123 301 aa25.1■■□□□ 1.61
RPUSD3-205ENST00000427174 LCTP09848 1927 aa25.1■■□□□ 1.61
RPUSD3-205ENST00000427174 CCDC69A6NI79 296 aa25.09■■□□□ 1.61
RPUSD3-205ENST00000427174 KLRF2D3W0D1 207 aa25.09■■□□□ 1.61
RPUSD3-205ENST00000427174 COPB2P35606 906 aa25.09■■□□□ 1.61
RPUSD3-205ENST00000427174 GRB14Q14449 540 aa25.09■■□□□ 1.61
RPUSD3-205ENST00000427174 RUFY3Q7L099 469 aa25.09■■□□□ 1.61
RPUSD3-205ENST00000427174 CCAR1Q8IX12 1150 aaKnown RBP25.09■■□□□ 1.61
RPUSD3-205ENST00000427174 TNS4Q8IZW8 715 aa25.09■■□□□ 1.61
RPUSD3-205ENST00000427174 MYL10Q9BUA6 226 aa25.09■■□□□ 1.61
RPUSD3-205ENST00000427174 BRPF3Q9ULD4 1205 aa25.09■■□□□ 1.61
RPUSD3-205ENST00000427174 RBBP6Q7Z6E9 1792 aaKnown RBP25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms