RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 COA1Q9GZY4 146 aa21.82■■□□□ 1.08
SNX17-202ENST00000427123 ATP6V0A2Q9Y487 856 aa21.82■■□□□ 1.08
SNX17-202ENST00000427123 GOLGA8HP0CJ92 632 aa21.82■■□□□ 1.08
SNX17-202ENST00000427123 A0A1B0GTH6 734 aa21.81■■□□□ 1.08
SNX17-202ENST00000427123 PPP1R3GB7ZBB8 358 aa21.81■■□□□ 1.08
SNX17-202ENST00000427123 LAD1O00515 517 aa21.81■■□□□ 1.08
SNX17-202ENST00000427123 GTF2IP78347 998 aa21.81■■□□□ 1.08
SNX17-202ENST00000427123 ANKRD7Q92527 254 aa21.81■■□□□ 1.08
SNX17-202ENST00000427123 CEP95Q96GE4 821 aa21.81■■□□□ 1.08
SNX17-202ENST00000427123 ZMYND12Q9H0C1 365 aa21.81■■□□□ 1.08
SNX17-202ENST00000427123 CDKAL1Q5VV42 579 aa21.8■■□□□ 1.08
SNX17-202ENST00000427123 KLHL10Q6JEL2 608 aa21.8■■□□□ 1.08
SNX17-202ENST00000427123 DTHD1Q6ZMT9 781 aa21.8■■□□□ 1.08
SNX17-202ENST00000427123 RRP36Q96EU6 259 aaKnown RBP21.8■■□□□ 1.08
SNX17-202ENST00000427123 RMND1Q9NWS8 449 aa21.8■■□□□ 1.08
SNX17-202ENST00000427123 NR1I3Q14994 352 aa21.8■■□□□ 1.08
SNX17-202ENST00000427123 TXNRD1Q16881 649 aa21.8■■□□□ 1.08
SNX17-202ENST00000427123 INF2Q27J81 1249 aa21.8■■□□□ 1.08
SNX17-202ENST00000427123 KRT25Q7Z3Z0 450 aa21.8■■□□□ 1.08
SNX17-202ENST00000427123 ARHGAP6O43182 974 aa21.79■■□□□ 1.08
SNX17-202ENST00000427123 PRPHP41219 470 aa21.79■■□□□ 1.08
SNX17-202ENST00000427123 STAT6P42226 847 aa21.79■■□□□ 1.08
SNX17-202ENST00000427123 NAPAP54920 295 aa21.79■■□□□ 1.08
SNX17-202ENST00000427123 SEC63Q9UGP8 760 aaKnown RBP21.79■■□□□ 1.08
SNX17-202ENST00000427123 PTPN21Q16825 1174 aa21.79■■□□□ 1.08
SNX17-202ENST00000427123 RASGRP2Q7LDG7 609 aa21.79■■□□□ 1.08
SNX17-202ENST00000427123 TMEM139Q8IV31 216 aa21.79■■□□□ 1.08
SNX17-202ENST00000427123 STAMQ92783 540 aa21.79■■□□□ 1.08
SNX17-202ENST00000427123 CTAGE1Q96RT6 745 aa21.79■■□□□ 1.08
SNX17-202ENST00000427123 MTRQ99707 1265 aa21.79■■□□□ 1.08
SNX17-202ENST00000427123 BLZF1Q9H2G9 400 aa21.79■■□□□ 1.08
SNX17-202ENST00000427123 DISC1Q9NRI5 854 aa21.79■■□□□ 1.08
SNX17-202ENST00000427123 CTNND2Q9UQB3 1225 aa21.79■■□□□ 1.08
SNX17-202ENST00000427123 STX17P56962 302 aa21.78■■□□□ 1.08
SNX17-202ENST00000427123 APTXQ7Z2E3 356 aaKnown RBP21.78■■□□□ 1.08
SNX17-202ENST00000427123 SMYD4Q8IYR2 804 aaPredicted RBP21.78■■□□□ 1.08
SNX17-202ENST00000427123 C6orf50Q9HD87 102 aa21.78■■□□□ 1.08
SNX17-202ENST00000427123 COL11A2P13942 1736 aaPredicted RBP21.78■■□□□ 1.08
SNX17-202ENST00000427123 C10orf71Q711Q0 1435 aa21.77■■□□□ 1.08
SNX17-202ENST00000427123 RIMBP2O15034 1052 aa21.77■■□□□ 1.08
SNX17-202ENST00000427123 GNA11P29992 359 aa21.77■■□□□ 1.08
SNX17-202ENST00000427123 NCBP1Q09161 790 aaKnown RBP21.77■■□□□ 1.08
SNX17-202ENST00000427123 USP17L2Q6R6M4 530 aa21.77■■□□□ 1.08
SNX17-202ENST00000427123 TMEM60Q9H2L4 133 aa21.77■■□□□ 1.08
SNX17-202ENST00000427123 GOLGA8FQ08AF8 430 aa21.77■■□□□ 1.07
SNX17-202ENST00000427123 GOLGA8DPQ0D2H9 430 aa21.77■■□□□ 1.07
SNX17-202ENST00000427123 KARSQ15046 597 aaKnown RBP21.77■■□□□ 1.07
SNX17-202ENST00000427123 ZNF658Q5TYW1 1059 aaPredicted RBP21.77■■□□□ 1.07
SNX17-202ENST00000427123 RRAGBQ5VZM2 374 aa21.77■■□□□ 1.07
SNX17-202ENST00000427123 TC2NQ8N9U0 490 aa21.77■■□□□ 1.07
SNX17-202ENST00000427123 BAG1Q99933 345 aaPredicted RBP21.77■■□□□ 1.07
SNX17-202ENST00000427123 RWDD2AQ9UIY3 292 aa21.77■■□□□ 1.07
SNX17-202ENST00000427123 hCG_1984214I3L0E3 225 aa21.76■■□□□ 1.07
SNX17-202ENST00000427123 ZSCAN12O43309 604 aa21.76■■□□□ 1.07
SNX17-202ENST00000427123 RPN1P04843 607 aaKnown RBP21.76■■□□□ 1.07
SNX17-202ENST00000427123 SRGNP10124 158 aa21.76■■□□□ 1.07
SNX17-202ENST00000427123 NPR1P16066 1061 aa21.76■■□□□ 1.07
SNX17-202ENST00000427123 GABPAQ06546 454 aa21.76■■□□□ 1.07
SNX17-202ENST00000427123 NONOQ15233 471 aaKnown RBP eCLIP21.76■■□□□ 1.07
SNX17-202ENST00000427123 SOGA3Q5TF21 947 aa21.76■■□□□ 1.07
SNX17-202ENST00000427123 PROM2Q8N271 834 aa21.76■■□□□ 1.07
SNX17-202ENST00000427123 ZNF713Q8N859 430 aaPredicted RBP21.76■■□□□ 1.07
SNX17-202ENST00000427123 CCSER1Q9C0I3 900 aa21.76■■□□□ 1.07
SNX17-202ENST00000427123 CPVLQ9H3G5 476 aa21.76■■□□□ 1.07
SNX17-202ENST00000427123 ESYT2A0FGR8 921 aa21.75■■□□□ 1.07
SNX17-202ENST00000427123 STX10O60499 249 aa21.75■■□□□ 1.07
SNX17-202ENST00000427123 PICALMQ13492 652 aa21.75■■□□□ 1.07
SNX17-202ENST00000427123 HOMER1Q86YM7 354 aa21.75■■□□□ 1.07
SNX17-202ENST00000427123 NLGN1Q8N2Q7 840 aa21.75■■□□□ 1.07
SNX17-202ENST00000427123 ZC3H12CQ9C0D7 883 aaKnown RBP21.75■■□□□ 1.07
SNX17-202ENST00000427123 ADD3Q9UEY8 706 aaKnown RBP21.75■■□□□ 1.07
SNX17-202ENST00000427123 MYO3BQ8WXR4 1341 aa21.75■■□□□ 1.07
SNX17-202ENST00000427123 SMCO2A6NFE2 343 aa21.75■■□□□ 1.07
SNX17-202ENST00000427123 MYL1P05976 194 aa21.75■■□□□ 1.07
SNX17-202ENST00000427123 PAK1Q13153 545 aa21.75■■□□□ 1.07
SNX17-202ENST00000427123 FILIP1LQ4L180 1135 aa21.75■■□□□ 1.07
SNX17-202ENST00000427123 CERS5Q8N5B7 392 aa21.75■■□□□ 1.07
SNX17-202ENST00000427123 MTMR4Q9NYA4 1195 aa21.75■■□□□ 1.07
SNX17-202ENST00000427123 ADAMTSL1Q8N6G6 1762 aa21.75■■□□□ 1.07
SNX17-202ENST00000427123 USP17L5A8MUK1 530 aa21.74■■□□□ 1.07
SNX17-202ENST00000427123 PDHBP11177 359 aa21.74■■□□□ 1.07
SNX17-202ENST00000427123 CDC25AP30304 524 aa21.74■■□□□ 1.07
SNX17-202ENST00000427123 UBA7P41226 1012 aa21.74■■□□□ 1.07
SNX17-202ENST00000427123 ORC2Q13416 577 aaPredicted RBP21.74■■□□□ 1.07
SNX17-202ENST00000427123 ASPRV1Q53RT3 343 aa21.74■■□□□ 1.07
SNX17-202ENST00000427123 RASSF8Q8NHQ8 419 aa21.74■■□□□ 1.07
SNX17-202ENST00000427123 AK8Q96MA6 479 aa21.74■■□□□ 1.07
SNX17-202ENST00000427123 RIOX1Q9H6W3 641 aa21.74■■□□□ 1.07
SNX17-202ENST00000427123 PHLPP2Q6ZVD8 1323 aa21.74■■□□□ 1.07
SNX17-202ENST00000427123 IGKV6D-41A0A0C4DH26 115 aa21.73■■□□□ 1.07
SNX17-202ENST00000427123 OR52Z1P0C646 297 aa21.73■■□□□ 1.07
SNX17-202ENST00000427123 SEMA3FQ13275 785 aa21.73■■□□□ 1.07
SNX17-202ENST00000427123 NAALADL2Q58DX5 795 aa21.73■■□□□ 1.07
SNX17-202ENST00000427123 SYT10Q6XYQ8 523 aa21.73■■□□□ 1.07
SNX17-202ENST00000427123 PDCL2Q8N4E4 241 aa21.73■■□□□ 1.07
SNX17-202ENST00000427123 PIGSQ96S52 555 aa21.73■■□□□ 1.07
SNX17-202ENST00000427123 MAGEF1Q9HAY2 307 aa21.73■■□□□ 1.07
SNX17-202ENST00000427123 SWAP70Q9UH65 585 aa21.73■■□□□ 1.07
SNX17-202ENST00000427123 TTF2Q9UNY4 1162 aaKnown RBP21.73■■□□□ 1.07
SNX17-202ENST00000427123 ALDH1B1P30837 517 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms