RNA–Protein interactions for RNA: ENST00000426909.1

SYNC-204, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-204ENST00000426909 TRIM29Q14134 588 aa12.71□□□□□ -0.37
SYNC-204ENST00000426909 ARHGEF6Q15052 776 aa12.71□□□□□ -0.37
SYNC-204ENST00000426909 PKN2Q16513 984 aaKnown RBP12.71□□□□□ -0.37
SYNC-204ENST00000426909 SH3D19Q5HYK7 790 aa12.71□□□□□ -0.37
SYNC-204ENST00000426909 RRP12Q5JTH9 1297 aaKnown RBP12.71□□□□□ -0.37
SYNC-204ENST00000426909 GPAT2Q6NUI2 795 aa12.71□□□□□ -0.37
SYNC-204ENST00000426909 TRIM22Q8IYM9 498 aa12.71□□□□□ -0.37
SYNC-204ENST00000426909 TOMM22Q9NS69 142 aa12.71□□□□□ -0.37
SYNC-204ENST00000426909 TMOD4Q9NZQ9 345 aa12.71□□□□□ -0.37
SYNC-204ENST00000426909 PNMA3Q9UL41 463 aa12.71□□□□□ -0.37
SYNC-204ENST00000426909 CYP2D7A0A087X1C5 515 aa12.7□□□□□ -0.38
SYNC-204ENST00000426909 ADD1P35611 737 aaKnown RBP12.7□□□□□ -0.38
SYNC-204ENST00000426909 EVX2Q03828 476 aa12.7□□□□□ -0.38
SYNC-204ENST00000426909 PDE4BQ07343 736 aa12.7□□□□□ -0.38
SYNC-204ENST00000426909 SSRP1Q08945 709 aaKnown RBP12.7□□□□□ -0.38
SYNC-204ENST00000426909 KIF22Q14807 665 aa12.7□□□□□ -0.38
SYNC-204ENST00000426909 SEC23AQ15436 765 aa12.7□□□□□ -0.38
SYNC-204ENST00000426909 RTN1Q16799 776 aa12.7□□□□□ -0.38
SYNC-204ENST00000426909 SHROOM1Q2M3G4 852 aaPredicted RBP12.7□□□□□ -0.38
SYNC-204ENST00000426909 CCDC178Q5BJE1 867 aa12.7□□□□□ -0.38
SYNC-204ENST00000426909 TMEM179Q6ZVK1 233 aa12.7□□□□□ -0.38
SYNC-204ENST00000426909 C16orf86Q6ZW13 317 aa12.7□□□□□ -0.38
SYNC-204ENST00000426909 MICU3Q86XE3 530 aa12.7□□□□□ -0.38
SYNC-204ENST00000426909 SMCR8Q8TEV9 937 aaPredicted RBP12.7□□□□□ -0.38
SYNC-204ENST00000426909 DYNLL2Q96FJ2 89 aa12.7□□□□□ -0.38
SYNC-204ENST00000426909 CCDC17Q96LX7 622 aa12.7□□□□□ -0.38
SYNC-204ENST00000426909 FEZ1Q99689 392 aa12.7□□□□□ -0.38
SYNC-204ENST00000426909 MCOLN1Q9GZU1 580 aa12.7□□□□□ -0.38
SYNC-204ENST00000426909 ZNF287Q9HBT7 754 aa12.7□□□□□ -0.38
SYNC-204ENST00000426909 RTEL1Q9NZ71 1219 aa12.7□□□□□ -0.38
SYNC-204ENST00000426909 TFIP11Q9UBB9 837 aaKnown RBP12.7□□□□□ -0.38
SYNC-204ENST00000426909 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.7□□□□□ -0.38
SYNC-204ENST00000426909 ROBO3Q96MS0 1386 aa12.69□□□□□ -0.38
SYNC-204ENST00000426909 CASP8AP2Q9UKL3 1982 aa12.69□□□□□ -0.38
SYNC-204ENST00000426909 DTNBO60941 627 aa12.69□□□□□ -0.38
SYNC-204ENST00000426909 FMNL1O95466 1100 aaPredicted RBP12.69□□□□□ -0.38
SYNC-204ENST00000426909 YEATS4O95619 227 aa12.69□□□□□ -0.38
SYNC-204ENST00000426909 CYP2C8P10632 490 aa12.69□□□□□ -0.38
SYNC-204ENST00000426909 CDK8P49336 464 aa12.69□□□□□ -0.38
SYNC-204ENST00000426909 USP14P54578 494 aa12.69□□□□□ -0.38
SYNC-204ENST00000426909 NTRK3Q16288 839 aa12.69□□□□□ -0.38
SYNC-204ENST00000426909 UVSSAQ2YD98 709 aa12.69□□□□□ -0.38
SYNC-204ENST00000426909 FAM173BQ6P4H8 233 aa12.69□□□□□ -0.38
SYNC-204ENST00000426909 ZNF654Q8IZM8 581 aa12.69□□□□□ -0.38
SYNC-204ENST00000426909 SLC44A5Q8NCS7 719 aa12.69□□□□□ -0.38
SYNC-204ENST00000426909 PPP1R9BQ96SB3 815 aa12.69□□□□□ -0.38
SYNC-204ENST00000426909 ZSCAN10Q96SZ4 725 aaPredicted RBP12.69□□□□□ -0.38
SYNC-204ENST00000426909 ALG1Q9BT22 464 aa12.69□□□□□ -0.38
SYNC-204ENST00000426909 RBSNQ9H1K0 784 aa12.69□□□□□ -0.38
SYNC-204ENST00000426909 RBM28Q9NW13 759 aaKnown RBP12.69□□□□□ -0.38
SYNC-204ENST00000426909 TACC3Q9Y6A5 838 aa12.69□□□□□ -0.38
SYNC-204ENST00000426909 LOC285556D6RIA3 1793 aa12.69□□□□□ -0.38
SYNC-204ENST00000426909 TNKSO95271 1327 aa12.68□□□□□ -0.38
SYNC-204ENST00000426909 CTAGE5O15320 804 aa12.68□□□□□ -0.38
SYNC-204ENST00000426909 DDAH1O94760 285 aa12.68□□□□□ -0.38
SYNC-204ENST00000426909 OSBPP22059 807 aa12.68□□□□□ -0.38
SYNC-204ENST00000426909 CDC27P30260 824 aa12.68□□□□□ -0.38
SYNC-204ENST00000426909 TREML2Q5T2D2 321 aa12.68□□□□□ -0.38
SYNC-204ENST00000426909 USP17L2Q6R6M4 530 aa12.68□□□□□ -0.38
SYNC-204ENST00000426909 C17orf99Q6UX52 265 aa12.68□□□□□ -0.38
SYNC-204ENST00000426909 CATIPQ7Z7H3 387 aa12.68□□□□□ -0.38
SYNC-204ENST00000426909 FANCBQ8NB91 859 aa12.68□□□□□ -0.38
SYNC-204ENST00000426909 CD99L2Q8TCZ2 262 aa12.68□□□□□ -0.38
SYNC-204ENST00000426909 KCNG4Q8TDN1 519 aa12.68□□□□□ -0.38
SYNC-204ENST00000426909 ABHD8Q96I13 439 aa12.68□□□□□ -0.38
SYNC-204ENST00000426909 PANK2Q9BZ23 570 aa12.68□□□□□ -0.38
SYNC-204ENST00000426909 KIAA1683Q9H0B3 1180 aa12.68□□□□□ -0.38
SYNC-204ENST00000426909 NUP62CLQ9H1M0 184 aa12.68□□□□□ -0.38
SYNC-204ENST00000426909 SH2D4AQ9H788 454 aa12.68□□□□□ -0.38
SYNC-204ENST00000426909 MKNK2Q9HBH9 465 aa12.68□□□□□ -0.38
SYNC-204ENST00000426909 FAM217BQ9NTX9 383 aaPredicted RBP12.68□□□□□ -0.38
SYNC-204ENST00000426909 POLR3EQ9NVU0 708 aa12.68□□□□□ -0.38
SYNC-204ENST00000426909 PTPRFP10586 1907 aa12.68□□□□□ -0.38
SYNC-204ENST00000426909 BAZ2AQ9UIF9 1905 aaKnown RBP12.68□□□□□ -0.38
SYNC-204ENST00000426909 ADGRA2Q96PE1 1338 aa12.67□□□□□ -0.38
SYNC-204ENST00000426909 DEXIO95424 95 aa12.67□□□□□ -0.38
SYNC-204ENST00000426909 AKR1B1P15121 316 aa12.67□□□□□ -0.38
SYNC-204ENST00000426909 IRX3P78415 501 aaPredicted RBP12.67□□□□□ -0.38
SYNC-204ENST00000426909 LACTBP83111 547 aaPredicted RBP12.67□□□□□ -0.38
SYNC-204ENST00000426909 SEPT2Q15019 361 aa12.67□□□□□ -0.38
SYNC-204ENST00000426909 IFIT1BQ5T764 474 aaKnown RBP12.67□□□□□ -0.38
SYNC-204ENST00000426909 NKX2-3Q8TAU0 364 aa12.67□□□□□ -0.38
SYNC-204ENST00000426909 BICD2Q8TD16 824 aa12.67□□□□□ -0.38
SYNC-204ENST00000426909 EFCC1Q9HA90 598 aa12.67□□□□□ -0.38
SYNC-204ENST00000426909 SENP2Q9HC62 589 aa12.67□□□□□ -0.38
SYNC-204ENST00000426909 ARHGEF10LQ9HCE6 1279 aa12.67□□□□□ -0.38
SYNC-204ENST00000426909 INCENPQ9NQS7 918 aa12.67□□□□□ -0.38
SYNC-204ENST00000426909 CPA4Q9UI42 421 aa12.67□□□□□ -0.38
SYNC-204ENST00000426909 TRIM17Q9Y577 477 aa12.67□□□□□ -0.38
SYNC-204ENST00000426909 A0A1W2PQ27 194 aa12.66□□□□□ -0.38
SYNC-204ENST00000426909 A0A1W2PQ64 194 aa12.66□□□□□ -0.38
SYNC-204ENST00000426909 A0A1W2PQD8 194 aa12.66□□□□□ -0.38
SYNC-204ENST00000426909 SMIM22K7EJ46 135 aa12.66□□□□□ -0.38
SYNC-204ENST00000426909 RANBP6O60518 1105 aaKnown RBP12.66□□□□□ -0.38
SYNC-204ENST00000426909 CAVIN2O95810 425 aa12.66□□□□□ -0.38
SYNC-204ENST00000426909 GNRH1P01148 92 aa12.66□□□□□ -0.38
SYNC-204ENST00000426909 CCDC192P0DO97 292 aa12.66□□□□□ -0.38
SYNC-204ENST00000426909 XBP1P17861 261 aa12.66□□□□□ -0.38
SYNC-204ENST00000426909 HOXA7P31268 230 aaPredicted RBP12.66□□□□□ -0.38
SYNC-204ENST00000426909 GUCY1A2P33402 732 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms