RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 TFAP4Q01664 338 aa8.78□□□□□ -1
LINC01049-201ENST00000426840 IMMTQ16891 758 aaKnown RBP8.78□□□□□ -1
LINC01049-201ENST00000426840 SH3D19Q5HYK7 790 aa8.78□□□□□ -1
LINC01049-201ENST00000426840 FAM47AQ5JRC9 791 aa8.78□□□□□ -1
LINC01049-201ENST00000426840 TMEM179Q6ZVK1 233 aa8.78□□□□□ -1
LINC01049-201ENST00000426840 ZNF280CQ8ND82 737 aa8.78□□□□□ -1
LINC01049-201ENST00000426840 NEDD1Q8NHV4 660 aa8.78□□□□□ -1
LINC01049-201ENST00000426840 ACER1Q8TDN7 264 aa8.78□□□□□ -1
LINC01049-201ENST00000426840 BRI3BPQ8WY22 251 aa8.78□□□□□ -1
LINC01049-201ENST00000426840 EMID1Q96A84 441 aaPredicted RBP8.78□□□□□ -1
LINC01049-201ENST00000426840 PTPN18Q99952 460 aa8.78□□□□□ -1
LINC01049-201ENST00000426840 ZNF287Q9HBT7 754 aa8.78□□□□□ -1
LINC01049-201ENST00000426840 ANO2Q9NQ90 1003 aa8.78□□□□□ -1
LINC01049-201ENST00000426840 TAF6LQ9Y6J9 622 aa8.78□□□□□ -1
LINC01049-201ENST00000426840 DOCK1Q14185 1865 aa8.78□□□□□ -1
LINC01049-201ENST00000426840 ATAD5Q96QE3 1844 aa8.77□□□□□ -1
LINC01049-201ENST00000426840 LAMB1P07942 1786 aa8.77□□□□□ -1.01
LINC01049-201ENST00000426840 A0A0G2JLL6 359 aaPredicted RBP8.77□□□□□ -1.01
LINC01049-201ENST00000426840 A0A1W2PRG0 241 aa8.77□□□□□ -1.01
LINC01049-201ENST00000426840 C19orf81C9J6K1 198 aa8.77□□□□□ -1.01
LINC01049-201ENST00000426840 MPHOSPH10O00566 681 aaKnown RBP8.77□□□□□ -1.01
LINC01049-201ENST00000426840 PCP11498 1178 aaKnown RBP8.77□□□□□ -1.01
LINC01049-201ENST00000426840 SLC19A1P41440 591 aa8.77□□□□□ -1.01
LINC01049-201ENST00000426840 GTF2A2P52657 109 aa8.77□□□□□ -1.01
LINC01049-201ENST00000426840 SNAPC2Q13487 334 aa8.77□□□□□ -1.01
LINC01049-201ENST00000426840 MTMR2Q13614 643 aa8.77□□□□□ -1.01
LINC01049-201ENST00000426840 RAB3GAP1Q15042 981 aa8.77□□□□□ -1.01
LINC01049-201ENST00000426840 GPAT2Q6NUI2 795 aa8.77□□□□□ -1.01
LINC01049-201ENST00000426840 MFSD6Q6ZSS7 791 aa8.77□□□□□ -1.01
LINC01049-201ENST00000426840 PRRT2Q7Z6L0 340 aaPredicted RBP8.77□□□□□ -1.01
LINC01049-201ENST00000426840 RETREG3Q86VR2 466 aa8.77□□□□□ -1.01
LINC01049-201ENST00000426840 KANSL2Q9H9L4 492 aa8.77□□□□□ -1.01
LINC01049-201ENST00000426840 AS3MTQ9HBK9 375 aa8.77□□□□□ -1.01
LINC01049-201ENST00000426840 MYH8P13535 1937 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 CCL15-CCL14A0A0B4J2E2 113 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 TRIM75PA6NK02 468 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 BTBD19C9JJ37 291 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 USP17L10C9JJH3 530 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 E7EWF7 191 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 IGF2BP3O00425 579 aaKnown RBP eCLIP8.76□□□□□ -1.01
LINC01049-201ENST00000426840 SLC27A2O14975 620 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 RANBP6O60518 1105 aaKnown RBP8.76□□□□□ -1.01
LINC01049-201ENST00000426840 CETPP11597 493 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 EEF2P13639 858 aaKnown RBP8.76□□□□□ -1.01
LINC01049-201ENST00000426840 NOVP48745 357 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 BACE1P56817 501 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 MAP2K1Q02750 393 aaPredicted RBP8.76□□□□□ -1.01
LINC01049-201ENST00000426840 DGKZQ13574 1117 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 CCL15Q16663 113 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 CREB3L3Q68CJ9 461 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 LIAT1Q6ZQX7 453 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 STOX1Q6ZVD7 989 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 CLEC10AQ8IUN9 316 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 IL27Q8NEV9 243 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 PRR7Q8TB68 274 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 KCNB2Q92953 911 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 MKL1Q969V6 931 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 USP26Q9BXU7 913 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 KIAA1683Q9H0B3 1180 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 RNF41Q9H4P4 317 aaPredicted RBP8.76□□□□□ -1.01
LINC01049-201ENST00000426840 IL17RBQ9NRM6 502 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 TCP11L1Q9NUJ3 509 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 MTMR4Q9NYA4 1195 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 ZSWIM5Q9P217 1185 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 NYAP2Q9P242 653 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 TMX2Q9Y320 296 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 NEDD4P46934 1319 aa8.76□□□□□ -1.01
LINC01049-201ENST00000426840 GREB1LQ9C091 1923 aaPredicted RBP8.76□□□□□ -1.01
LINC01049-201ENST00000426840 TSPY2A6NKD2 308 aa8.75□□□□□ -1.01
LINC01049-201ENST00000426840 B4E1Z4 1266 aa8.75□□□□□ -1.01
LINC01049-201ENST00000426840 EPB41L2O43491 1005 aaKnown RBP8.75□□□□□ -1.01
LINC01049-201ENST00000426840 NMT2O60551 498 aa8.75□□□□□ -1.01
LINC01049-201ENST00000426840 REC8O95072 547 aa8.75□□□□□ -1.01
LINC01049-201ENST00000426840 TSPY3P0CV98 308 aa8.75□□□□□ -1.01
LINC01049-201ENST00000426840 TSPY8P0CW00 308 aa8.75□□□□□ -1.01
LINC01049-201ENST00000426840 CLK2P49760 499 aaKnown RBP8.75□□□□□ -1.01
LINC01049-201ENST00000426840 HMGCS2P54868 508 aa8.75□□□□□ -1.01
LINC01049-201ENST00000426840 SREBF2Q12772 1141 aa8.75□□□□□ -1.01
LINC01049-201ENST00000426840 COL9A3Q14050 684 aaPredicted RBP8.75□□□□□ -1.01
LINC01049-201ENST00000426840 TSGA10IPQ3SY00 556 aa8.75□□□□□ -1.01
LINC01049-201ENST00000426840 RRP12Q5JTH9 1297 aaKnown RBP8.75□□□□□ -1.01
LINC01049-201ENST00000426840 KIAA1755Q5JYT7 1200 aa8.75□□□□□ -1.01
LINC01049-201ENST00000426840 FASTKD5Q7L8L6 764 aaKnown RBP8.75□□□□□ -1.01
LINC01049-201ENST00000426840 ANKRD23Q86SG2 305 aa8.75□□□□□ -1.01
LINC01049-201ENST00000426840 FAM43AQ8N2R8 423 aa8.75□□□□□ -1.01
LINC01049-201ENST00000426840 CEP95Q96GE4 821 aa8.75□□□□□ -1.01
LINC01049-201ENST00000426840 TOMM22Q9NS69 142 aa8.75□□□□□ -1.01
LINC01049-201ENST00000426840 RNF186Q9NXI6 227 aa8.75□□□□□ -1.01
LINC01049-201ENST00000426840 CLIP2Q9UDT6 1046 aa8.75□□□□□ -1.01
LINC01049-201ENST00000426840 PLIN4Q96Q06 1357 aa8.74□□□□□ -1.01
LINC01049-201ENST00000426840 PTPRFP10586 1907 aa8.74□□□□□ -1.01
LINC01049-201ENST00000426840 THSD7BQ9C0I4 1608 aa8.74□□□□□ -1.01
LINC01049-201ENST00000426840 DXOO77932 396 aaKnown RBP8.74□□□□□ -1.01
LINC01049-201ENST00000426840 JUNDP17535 347 aa8.74□□□□□ -1.01
LINC01049-201ENST00000426840 HSPA4P34932 840 aa8.74□□□□□ -1.01
LINC01049-201ENST00000426840 NT5C2P49902 561 aa8.74□□□□□ -1.01
LINC01049-201ENST00000426840 MMP16P51512 607 aa8.74□□□□□ -1.01
LINC01049-201ENST00000426840 ICA1Q05084 483 aa8.74□□□□□ -1.01
LINC01049-201ENST00000426840 ZYXQ15942 572 aaKnown RBP8.74□□□□□ -1.01
LINC01049-201ENST00000426840 QPCTQ16769 361 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms