RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 XKR9Q5GH70 373 aa15.44■□□□□ 0.06
RPL28-202ENST00000426763 FOXP1Q9H334 677 aaPredicted RBP15.44■□□□□ 0.06
RPL28-202ENST00000426763 GUCA1BQ9UMX6 200 aa15.44■□□□□ 0.06
RPL28-202ENST00000426763 CCDC66A2RUB6 948 aa15.44■□□□□ 0.06
RPL28-202ENST00000426763 FAM102BQ5T8I3 360 aa15.44■□□□□ 0.06
RPL28-202ENST00000426763 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.44■□□□□ 0.06
RPL28-202ENST00000426763 CCDC50Q8IVM0 306 aa15.44■□□□□ 0.06
RPL28-202ENST00000426763 TTC16Q8NEE8 873 aa15.44■□□□□ 0.06
RPL28-202ENST00000426763 CYP2D7A0A087X1C5 515 aa15.44■□□□□ 0.06
RPL28-202ENST00000426763 CNGA1P29973 690 aa15.44■□□□□ 0.06
RPL28-202ENST00000426763 NOLC1Q14978 699 aaKnown RBP eCLIP15.44■□□□□ 0.06
RPL28-202ENST00000426763 FAM47CQ5HY64 1035 aa15.44■□□□□ 0.06
RPL28-202ENST00000426763 SYDE2Q5VT97 1194 aa15.44■□□□□ 0.06
RPL28-202ENST00000426763 FAM160B2Q86V87 743 aa15.44■□□□□ 0.06
RPL28-202ENST00000426763 ZBTB8OSQ8IWT0 167 aa15.44■□□□□ 0.06
RPL28-202ENST00000426763 ADD3Q9UEY8 706 aaKnown RBP15.44■□□□□ 0.06
RPL28-202ENST00000426763 H0YCG3 227 aa15.44■□□□□ 0.06
RPL28-202ENST00000426763 FANCCQ00597 558 aa15.44■□□□□ 0.06
RPL28-202ENST00000426763 METTL13Q8N6R0 699 aa15.44■□□□□ 0.06
RPL28-202ENST00000426763 SH3RF3Q8TEJ3 882 aaPredicted RBP15.44■□□□□ 0.06
RPL28-202ENST00000426763 BAG1Q99933 345 aaPredicted RBP15.44■□□□□ 0.06
RPL28-202ENST00000426763 ZSWIM5Q9P217 1185 aa15.44■□□□□ 0.06
RPL28-202ENST00000426763 LONP1P36776 959 aaKnown RBP15.43■□□□□ 0.06
RPL28-202ENST00000426763 GPSM2P81274 684 aa15.43■□□□□ 0.06
RPL28-202ENST00000426763 FAM160B1Q5W0V3 765 aa15.43■□□□□ 0.06
RPL28-202ENST00000426763 TMEM179Q6ZVK1 233 aa15.43■□□□□ 0.06
RPL28-202ENST00000426763 ZNF526Q8TF50 670 aaPredicted RBP15.43■□□□□ 0.06
RPL28-202ENST00000426763 BCCIPQ9P287 314 aaKnown RBP eCLIP15.43■□□□□ 0.06
RPL28-202ENST00000426763 NFE2L3Q9Y4A8 694 aa15.43■□□□□ 0.06
RPL28-202ENST00000426763 FSD2A1L4K1 749 aa15.43■□□□□ 0.06
RPL28-202ENST00000426763 LAD1O00515 517 aa15.43■□□□□ 0.06
RPL28-202ENST00000426763 CYP2E1P05181 493 aaPredicted RBP15.43■□□□□ 0.06
RPL28-202ENST00000426763 PRDX5P30044 214 aa15.43■□□□□ 0.06
RPL28-202ENST00000426763 FOXO4P98177 505 aa15.43■□□□□ 0.06
RPL28-202ENST00000426763 NRBP2Q9NSY0 501 aa15.43■□□□□ 0.06
RPL28-202ENST00000426763 CMA1P23946 247 aa15.43■□□□□ 0.06
RPL28-202ENST00000426763 SLC16A2P36021 539 aa15.43■□□□□ 0.06
RPL28-202ENST00000426763 LIFRP42702 1097 aa15.43■□□□□ 0.06
RPL28-202ENST00000426763 ASIC2Q16515 512 aa15.43■□□□□ 0.06
RPL28-202ENST00000426763 ATP6V0A2Q9Y487 856 aa15.43■□□□□ 0.06
RPL28-202ENST00000426763 GNA14O95837 355 aa15.42■□□□□ 0.06
RPL28-202ENST00000426763 ASNSP08243 561 aa15.42■□□□□ 0.06
RPL28-202ENST00000426763 SNX16P57768 344 aa15.42■□□□□ 0.06
RPL28-202ENST00000426763 TTC14Q96N46 770 aa15.42■□□□□ 0.06
RPL28-202ENST00000426763 PIGSQ96S52 555 aa15.42■□□□□ 0.06
RPL28-202ENST00000426763 PLA2G12BQ9BX93 195 aa15.42■□□□□ 0.06
RPL28-202ENST00000426763 PTGDRQ13258 359 aa15.42■□□□□ 0.06
RPL28-202ENST00000426763 BBXQ8WY36 941 aaPredicted RBP15.42■□□□□ 0.06
RPL28-202ENST00000426763 NOX5Q96PH1 765 aa15.42■□□□□ 0.06
RPL28-202ENST00000426763 LMBRD1Q9NUN5 540 aa15.42■□□□□ 0.06
RPL28-202ENST00000426763 PNOCQ13519 176 aa15.42■□□□□ 0.06
RPL28-202ENST00000426763 RABGAP1Q9Y3P9 1069 aa15.42■□□□□ 0.06
RPL28-202ENST00000426763 COMMD10Q9Y6G5 202 aa15.42■□□□□ 0.06
RPL28-202ENST00000426763 IKBKGQ9Y6K9 419 aa15.42■□□□□ 0.06
RPL28-202ENST00000426763 NSUN7Q8NE18 718 aaKnown RBP15.42■□□□□ 0.06
RPL28-202ENST00000426763 SNAP23O00161 211 aa15.42■□□□□ 0.06
RPL28-202ENST00000426763 CEP112Q8N8E3 955 aa15.42■□□□□ 0.06
RPL28-202ENST00000426763 PRIMPOLQ96LW4 560 aa15.42■□□□□ 0.06
RPL28-202ENST00000426763 CBX8Q9HC52 389 aa15.42■□□□□ 0.06
RPL28-202ENST00000426763 LZTFL1Q9NQ48 299 aa15.42■□□□□ 0.06
RPL28-202ENST00000426763 GCFC2P16383 781 aaKnown RBP15.41■□□□□ 0.06
RPL28-202ENST00000426763 PLCB3Q01970 1234 aa15.41■□□□□ 0.06
RPL28-202ENST00000426763 DGKHQ86XP1 1220 aa15.41■□□□□ 0.06
RPL28-202ENST00000426763 MYOCDQ8IZQ8 938 aa15.41■□□□□ 0.06
RPL28-202ENST00000426763 SLC10A4Q96EP9 437 aa15.41■□□□□ 0.06
RPL28-202ENST00000426763 CCDC97Q96F63 343 aaPredicted RBP15.41■□□□□ 0.06
RPL28-202ENST00000426763 PPM1FP49593 454 aaPredicted RBP15.41■□□□□ 0.06
RPL28-202ENST00000426763 GSTA5Q7RTV2 222 aa15.41■□□□□ 0.06
RPL28-202ENST00000426763 LINC00116Q8NCU8 138 aa15.41■□□□□ 0.06
RPL28-202ENST00000426763 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.41■□□□□ 0.06
RPL28-202ENST00000426763 CRAMP1Q96RY5 1269 aa15.41■□□□□ 0.06
RPL28-202ENST00000426763 ZNF277Q9NRM2 450 aaPredicted RBP15.41■□□□□ 0.06
RPL28-202ENST00000426763 ZKSCAN5Q9Y2L8 839 aa15.41■□□□□ 0.06
RPL28-202ENST00000426763 IFNAR1P17181 557 aa15.41■□□□□ 0.06
RPL28-202ENST00000426763 KARSQ15046 597 aaKnown RBP15.41■□□□□ 0.06
RPL28-202ENST00000426763 LIN9Q5TKA1 542 aa15.41■□□□□ 0.06
RPL28-202ENST00000426763 SRRTQ9BXP5 876 aaKnown RBP15.41■□□□□ 0.06
RPL28-202ENST00000426763 TAB2Q9NYJ8 693 aa15.41■□□□□ 0.06
RPL28-202ENST00000426763 SORBS3O60504 671 aa15.41■□□□□ 0.06
RPL28-202ENST00000426763 UTP14CQ5TAP6 766 aaKnown RBP15.41■□□□□ 0.06
RPL28-202ENST00000426763 MAATS1Q7Z4T9 603 aa15.41■□□□□ 0.06
RPL28-202ENST00000426763 GOLGA5Q8TBA6 731 aa15.41■□□□□ 0.06
RPL28-202ENST00000426763 ABCC12Q96J65 1359 aa15.41■□□□□ 0.06
RPL28-202ENST00000426763 USP32Q8NFA0 1604 aa15.41■□□□□ 0.06
RPL28-202ENST00000426763 CAMTA2O94983 1202 aa15.4■□□□□ 0.06
RPL28-202ENST00000426763 TBC1D10BQ4KMP7 808 aaPredicted RBP15.4■□□□□ 0.06
RPL28-202ENST00000426763 LRCH2Q5VUJ6 765 aa15.4■□□□□ 0.06
RPL28-202ENST00000426763 USP17L2Q6R6M4 530 aa15.4■□□□□ 0.06
RPL28-202ENST00000426763 SPON1Q9HCB6 807 aa15.4■□□□□ 0.06
RPL28-202ENST00000426763 LARSQ9P2J5 1176 aaKnown RBP15.4■□□□□ 0.06
RPL28-202ENST00000426763 MROH7-TTC4A0A0A0MT08 1334 aa15.4■□□□□ 0.06
RPL28-202ENST00000426763 PRPF3O43395 683 aaKnown RBP15.4■□□□□ 0.06
RPL28-202ENST00000426763 CCDC84Q86UT8 332 aaPredicted RBP15.4■□□□□ 0.06
RPL28-202ENST00000426763 CCDC117Q8IWD4 279 aaPredicted RBP15.4■□□□□ 0.06
RPL28-202ENST00000426763 ZNF34Q8IZ26 560 aa15.4■□□□□ 0.06
RPL28-202ENST00000426763 STAG1Q8WVM7 1258 aa15.4■□□□□ 0.06
RPL28-202ENST00000426763 COL4A3BPQ9Y5P4 624 aa15.4■□□□□ 0.06
RPL28-202ENST00000426763 FER1L4A9Z1Z3 1794 aa15.4■□□□□ 0.06
RPL28-202ENST00000426763 BCRP11274 1271 aa15.4■□□□□ 0.06
RPL28-202ENST00000426763 TMOD1P28289 359 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms