RNA–Protein interactions for RNA: ENST00000426677.6

TOMM40-203, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOMM40, Length 1,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-203ENST00000426677 SYNPO2Q9UMS6 1093 aa27.8■■■□□ 2.04
TOMM40-203ENST00000426677 KCNH4Q9UQ05 1017 aa27.8■■■□□ 2.04
TOMM40-203ENST00000426677 COL11A1P12107 1806 aaPredicted RBP27.79■■■□□ 2.04
TOMM40-203ENST00000426677 BMP3P12645 472 aa27.79■■■□□ 2.04
TOMM40-203ENST00000426677 CNPY2Q9Y2B0 182 aa27.79■■■□□ 2.04
TOMM40-203ENST00000426677 TMEM88BA6NKF7 163 aa27.78■■■□□ 2.04
TOMM40-203ENST00000426677 SNAP25P60880 206 aa27.78■■■□□ 2.04
TOMM40-203ENST00000426677 RASAL3Q86YV0 1011 aa27.78■■■□□ 2.04
TOMM40-203ENST00000426677 FAM184AQ8NB25 1140 aa27.78■■■□□ 2.04
TOMM40-203ENST00000426677 AIFM3Q96NN9 605 aa27.78■■■□□ 2.04
TOMM40-203ENST00000426677 ABT1Q9ULW3 272 aaKnown RBP27.78■■■□□ 2.04
TOMM40-203ENST00000426677 A0A0G2JLL6 359 aaPredicted RBP27.78■■■□□ 2.04
TOMM40-203ENST00000426677 TMEM232C9JQI7 657 aa27.78■■■□□ 2.04
TOMM40-203ENST00000426677 ASPRV1Q53RT3 343 aa27.78■■■□□ 2.04
TOMM40-203ENST00000426677 SH3D19Q5HYK7 790 aa27.78■■■□□ 2.04
TOMM40-203ENST00000426677 PRRT2Q7Z6L0 340 aaPredicted RBP27.78■■■□□ 2.04
TOMM40-203ENST00000426677 GDPD2Q9HCC8 539 aa27.78■■■□□ 2.04
TOMM40-203ENST00000426677 CPLX1O14810 134 aa27.77■■■□□ 2.04
TOMM40-203ENST00000426677 DHX16O60231 1041 aaKnown RBP27.77■■■□□ 2.04
TOMM40-203ENST00000426677 SPRYD7Q5W111 196 aa27.77■■■□□ 2.04
TOMM40-203ENST00000426677 SAMD1Q6SPF0 538 aaPredicted RBP27.77■■■□□ 2.04
TOMM40-203ENST00000426677 RPAP3Q9H6T3 665 aaPredicted RBP27.77■■■□□ 2.04
TOMM40-203ENST00000426677 VAT1LQ9HCJ6 419 aa27.77■■■□□ 2.04
TOMM40-203ENST00000426677 RBM28Q9NW13 759 aaKnown RBP27.77■■■□□ 2.04
TOMM40-203ENST00000426677 KIF3AQ9Y496 699 aa27.77■■■□□ 2.04
TOMM40-203ENST00000426677 UNCXA6NJT0 531 aa27.76■■■□□ 2.03
TOMM40-203ENST00000426677 IFNAR1P17181 557 aa27.76■■■□□ 2.03
TOMM40-203ENST00000426677 KIF5BP33176 963 aa27.76■■■□□ 2.03
TOMM40-203ENST00000426677 ZNF157P51786 506 aaPredicted RBP27.76■■■□□ 2.03
TOMM40-203ENST00000426677 HTRA3P83110 453 aa27.76■■■□□ 2.03
TOMM40-203ENST00000426677 DNM1Q05193 864 aaKnown RBP27.76■■■□□ 2.03
TOMM40-203ENST00000426677 GADL1Q6ZQY3 521 aa27.76■■■□□ 2.03
TOMM40-203ENST00000426677 MS4A4AQ96JQ5 239 aa27.76■■■□□ 2.03
TOMM40-203ENST00000426677 C12orf42Q96LP6 360 aa27.76■■■□□ 2.03
TOMM40-203ENST00000426677 SLC26A6Q9BXS9 759 aa27.76■■■□□ 2.03
TOMM40-203ENST00000426677 FSD2A1L4K1 749 aa27.75■■■□□ 2.03
TOMM40-203ENST00000426677 C19orf81C9J6K1 198 aa27.75■■■□□ 2.03
TOMM40-203ENST00000426677 MBD3O95983 291 aa27.75■■■□□ 2.03
TOMM40-203ENST00000426677 TAL1P17542 331 aaPredicted RBP27.75■■■□□ 2.03
TOMM40-203ENST00000426677 FOSBP53539 338 aa27.75■■■□□ 2.03
TOMM40-203ENST00000426677 USP14P54578 494 aa27.75■■■□□ 2.03
TOMM40-203ENST00000426677 GJB4Q9NTQ9 266 aa27.75■■■□□ 2.03
TOMM40-203ENST00000426677 RGMBQ6NW40 437 aa27.75■■■□□ 2.03
TOMM40-203ENST00000426677 FERMT3Q86UX7 667 aa27.75■■■□□ 2.03
TOMM40-203ENST00000426677 ADGRF4Q8IZF3 695 aa27.75■■■□□ 2.03
TOMM40-203ENST00000426677 SHISA4Q96DD7 197 aa27.75■■■□□ 2.03
TOMM40-203ENST00000426677 WDR46O15213 610 aaKnown RBP27.74■■■□□ 2.03
TOMM40-203ENST00000426677 LPAR1Q92633 364 aa27.74■■■□□ 2.03
TOMM40-203ENST00000426677 ZIC5Q96T25 663 aa27.74■■■□□ 2.03
TOMM40-203ENST00000426677 TANGO6Q9C0B7 1094 aa27.74■■■□□ 2.03
TOMM40-203ENST00000426677 V9GY48 417 aaPredicted RBP27.74■■■□□ 2.03
TOMM40-203ENST00000426677 FAM155AB1AL88 458 aaPredicted RBP27.73■■■□□ 2.03
TOMM40-203ENST00000426677 CXCL11O14625 94 aa27.73■■■□□ 2.03
TOMM40-203ENST00000426677 RESTQ13127 1097 aa27.73■■■□□ 2.03
TOMM40-203ENST00000426677 PKN1Q16512 942 aa27.73■■■□□ 2.03
TOMM40-203ENST00000426677 GPATCH4Q5T3I0 446 aaKnown RBP27.73■■■□□ 2.03
TOMM40-203ENST00000426677 JMJD4Q9H9V9 463 aa27.73■■■□□ 2.03
TOMM40-203ENST00000426677 TMOD4Q9NZQ9 345 aa27.73■■■□□ 2.03
TOMM40-203ENST00000426677 CCDC196A0A1B0GTZ2 297 aa27.72■■■□□ 2.03
TOMM40-203ENST00000426677 GADD45BO75293 160 aaPredicted RBP27.72■■■□□ 2.03
TOMM40-203ENST00000426677 FMNL1O95466 1100 aaPredicted RBP27.72■■■□□ 2.03
TOMM40-203ENST00000426677 GPAT2Q6NUI2 795 aa27.72■■■□□ 2.03
TOMM40-203ENST00000426677 PIGSQ96S52 555 aa27.72■■■□□ 2.03
TOMM40-203ENST00000426677 RIOX1Q9H6W3 641 aa27.72■■■□□ 2.03
TOMM40-203ENST00000426677 H3BQV1 296 aa27.72■■■□□ 2.03
TOMM40-203ENST00000426677 NCLP19338 710 aaKnown RBP27.72■■■□□ 2.03
TOMM40-203ENST00000426677 IKQ13123 557 aaPredicted RBP27.72■■■□□ 2.03
TOMM40-203ENST00000426677 IFFO2Q5TF58 517 aa27.72■■■□□ 2.03
TOMM40-203ENST00000426677 HOMER1Q86YM7 354 aa27.72■■■□□ 2.03
TOMM40-203ENST00000426677 BRI3BPQ8WY22 251 aa27.72■■■□□ 2.03
TOMM40-203ENST00000426677 SPZ1Q9BXG8 430 aa27.72■■■□□ 2.03
TOMM40-203ENST00000426677 ORC3Q9UBD5 711 aaPredicted RBP27.72■■■□□ 2.03
TOMM40-203ENST00000426677 PRR12Q9ULL5 1215 aa27.72■■■□□ 2.03
TOMM40-203ENST00000426677 PEX10O60683 326 aa27.71■■■□□ 2.03
TOMM40-203ENST00000426677 SLC10A3P09131 477 aa27.71■■■□□ 2.03
TOMM40-203ENST00000426677 GRM1Q13255 1194 aa27.71■■■□□ 2.03
TOMM40-203ENST00000426677 PPP2R5BQ15173 497 aa27.71■■■□□ 2.03
TOMM40-203ENST00000426677 CYP4F22Q6NT55 531 aa27.71■■■□□ 2.03
TOMM40-203ENST00000426677 CAVIN1Q6NZI2 390 aaKnown RBP27.71■■■□□ 2.03
TOMM40-203ENST00000426677 POTEEQ6S8J3 1075 aa27.71■■■□□ 2.03
TOMM40-203ENST00000426677 BTNL9Q6UXG8 535 aa27.71■■■□□ 2.03
TOMM40-203ENST00000426677 KIFC2Q96AC6 838 aa27.71■■■□□ 2.03
TOMM40-203ENST00000426677 ZSCAN16Q9H4T2 348 aaPredicted RBP27.71■■■□□ 2.03
TOMM40-203ENST00000426677 PPP1R11O60927 126 aaPredicted RBP27.7■■■□□ 2.03
TOMM40-203ENST00000426677 APLP1P51693 650 aa27.7■■■□□ 2.03
TOMM40-203ENST00000426677 STAT2P52630 851 aa27.7■■■□□ 2.03
TOMM40-203ENST00000426677 SSRP1Q08945 709 aaKnown RBP27.7■■■□□ 2.03
TOMM40-203ENST00000426677 SNAPC2Q13487 334 aa27.7■■■□□ 2.03
TOMM40-203ENST00000426677 SYDE2Q5VT97 1194 aa27.7■■■□□ 2.03
TOMM40-203ENST00000426677 GNAQP50148 359 aa27.7■■■□□ 2.02
TOMM40-203ENST00000426677 PTPN18Q99952 460 aa27.7■■■□□ 2.02
TOMM40-203ENST00000426677 CCL15-CCL14A0A0B4J2E2 113 aa27.69■■■□□ 2.02
TOMM40-203ENST00000426677 FIBPO43427 364 aa27.69■■■□□ 2.02
TOMM40-203ENST00000426677 FLOT1O75955 427 aa27.69■■■□□ 2.02
TOMM40-203ENST00000426677 ZBTB48P10074 688 aaPredicted RBP27.69■■■□□ 2.02
TOMM40-203ENST00000426677 CCL15Q16663 113 aa27.69■■■□□ 2.02
TOMM40-203ENST00000426677 CSPP1Q1MSJ5 1256 aa27.69■■■□□ 2.02
TOMM40-203ENST00000426677 OTUD7BQ6GQQ9 843 aa27.69■■■□□ 2.02
TOMM40-203ENST00000426677 FAM173BQ6P4H8 233 aa27.69■■■□□ 2.02
TOMM40-203ENST00000426677 GPKOWQ92917 476 aaPredicted RBP eCLIP27.69■■■□□ 2.025e-7■■■■□ 23.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms