RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 GALNT17Q6IS24 598 aa17.38■□□□□ 0.37
GINS3-203ENST00000426538 CCDC84Q86UT8 332 aaPredicted RBP17.38■□□□□ 0.37
GINS3-203ENST00000426538 ZKSCAN4Q969J2 545 aaPredicted RBP17.38■□□□□ 0.37
GINS3-203ENST00000426538 NUP88Q99567 741 aaPredicted RBP17.38■□□□□ 0.37
GINS3-203ENST00000426538 AS3MTQ9HBK9 375 aa17.38■□□□□ 0.37
GINS3-203ENST00000426538 NAPAP54920 295 aa17.37■□□□□ 0.37
GINS3-203ENST00000426538 NR5A1Q13285 461 aa17.37■□□□□ 0.37
GINS3-203ENST00000426538 LEO1Q8WVC0 666 aaPredicted RBP17.37■□□□□ 0.37
GINS3-203ENST00000426538 SHISA4Q96DD7 197 aa17.37■□□□□ 0.37
GINS3-203ENST00000426538 USP28Q96RU2 1077 aa17.37■□□□□ 0.37
GINS3-203ENST00000426538 FZD1Q9UP38 647 aa17.37■□□□□ 0.37
GINS3-203ENST00000426538 CLEC11AQ9Y240 323 aa17.37■□□□□ 0.37
GINS3-203ENST00000426538 ATAD5Q96QE3 1844 aa17.37■□□□□ 0.37
GINS3-203ENST00000426538 GOLGA6L4A6NEF3 574 aa17.36■□□□□ 0.37
GINS3-203ENST00000426538 POTECB2RU33 542 aa17.36■□□□□ 0.37
GINS3-203ENST00000426538 USP17L10C9JJH3 530 aa17.36■□□□□ 0.37
GINS3-203ENST00000426538 STXBP3O00186 592 aa17.36■□□□□ 0.37
GINS3-203ENST00000426538 ZBTB5O15062 677 aa17.36■□□□□ 0.37
GINS3-203ENST00000426538 STAT2P52630 851 aa17.36■□□□□ 0.37
GINS3-203ENST00000426538 OXER1Q8TDS5 423 aa17.36■□□□□ 0.37
GINS3-203ENST00000426538 GLIS2Q9BZE0 524 aaPredicted RBP17.36■□□□□ 0.37
GINS3-203ENST00000426538 PCDHA4Q9UN74 947 aa17.36■□□□□ 0.37
GINS3-203ENST00000426538 ELP1O95163 1332 aa17.36■□□□□ 0.37
GINS3-203ENST00000426538 USP2O75604 605 aaPredicted RBP17.35■□□□□ 0.37
GINS3-203ENST00000426538 MBD3O95983 291 aa17.35■□□□□ 0.37
GINS3-203ENST00000426538 GNA11P29992 359 aa17.35■□□□□ 0.37
GINS3-203ENST00000426538 UBE2HP62256 183 aa17.35■□□□□ 0.37
GINS3-203ENST00000426538 SYDE2Q5VT97 1194 aa17.35■□□□□ 0.37
GINS3-203ENST00000426538 BLIDQ8IZY5 108 aa17.35■□□□□ 0.37
GINS3-203ENST00000426538 CHURC1Q8WUH1 139 aa17.35■□□□□ 0.37
GINS3-203ENST00000426538 KIAA1683Q9H0B3 1180 aa17.35■□□□□ 0.37
GINS3-203ENST00000426538 C6orf50Q9HD87 102 aa17.35■□□□□ 0.37
GINS3-203ENST00000426538 RTEL1Q9NZ71 1219 aa17.35■□□□□ 0.37
GINS3-203ENST00000426538 SMCO2A6NFE2 343 aa17.35■□□□□ 0.37
GINS3-203ENST00000426538 GADD45BO75293 160 aaPredicted RBP17.35■□□□□ 0.37
GINS3-203ENST00000426538 PTPRAP18433 802 aa17.35■□□□□ 0.37
GINS3-203ENST00000426538 USP14P54578 494 aa17.35■□□□□ 0.37
GINS3-203ENST00000426538 KLHL40Q2TBA0 621 aa17.35■□□□□ 0.37
GINS3-203ENST00000426538 RILPL1Q5EBL4 403 aa17.35■□□□□ 0.37
GINS3-203ENST00000426538 KIAA1755Q5JYT7 1200 aa17.35■□□□□ 0.37
GINS3-203ENST00000426538 FAM83BQ5T0W9 1011 aa17.35■□□□□ 0.37
GINS3-203ENST00000426538 BTNL9Q6UXG8 535 aa17.35■□□□□ 0.37
GINS3-203ENST00000426538 DLK2Q6UY11 383 aa17.35■□□□□ 0.37
GINS3-203ENST00000426538 LPAR1Q92633 364 aa17.35■□□□□ 0.37
GINS3-203ENST00000426538 MTMR8Q96EF0 704 aa17.35■□□□□ 0.37
GINS3-203ENST00000426538 POLR3EQ9NVU0 708 aa17.35■□□□□ 0.37
GINS3-203ENST00000426538 RCOR1Q9UKL0 485 aa17.35■□□□□ 0.37
GINS3-203ENST00000426538 IREB2P48200 963 aaKnown RBP17.34■□□□□ 0.37
GINS3-203ENST00000426538 MAP3K9P80192 1104 aa17.34■□□□□ 0.37
GINS3-203ENST00000426538 STK38Q15208 465 aa17.34■□□□□ 0.37
GINS3-203ENST00000426538 SF3A1Q15459 793 aaKnown RBP17.34■□□□□ 0.37
GINS3-203ENST00000426538 NPY5RQ15761 445 aa17.34■□□□□ 0.37
GINS3-203ENST00000426538 TPRNQ4KMQ1 711 aa17.34■□□□□ 0.37
GINS3-203ENST00000426538 ANO1Q5XXA6 986 aa17.34■□□□□ 0.37
GINS3-203ENST00000426538 TYW1BQ6NUM6 668 aa17.34■□□□□ 0.37
GINS3-203ENST00000426538 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.34■□□□□ 0.37
GINS3-203ENST00000426538 WDR18Q9BV38 432 aa17.34■□□□□ 0.37
GINS3-203ENST00000426538 FTOQ9C0B1 505 aaKnown RBP eCLIP17.34■□□□□ 0.37
GINS3-203ENST00000426538 ZMYND12Q9H0C1 365 aa17.34■□□□□ 0.37
GINS3-203ENST00000426538 ZHX2Q9Y6X8 837 aa17.34■□□□□ 0.37
GINS3-203ENST00000426538 MYH15Q9Y2K3 1946 aa17.34■□□□□ 0.37
GINS3-203ENST00000426538 WDR90Q96KV7 1748 aa17.33■□□□□ 0.37
GINS3-203ENST00000426538 SSC5DA1L4H1 1573 aa17.33■□□□□ 0.37
GINS3-203ENST00000426538 SPP2Q13103 211 aa17.33■□□□□ 0.37
GINS3-203ENST00000426538 CDC37Q16543 378 aaPredicted RBP17.33■□□□□ 0.37
GINS3-203ENST00000426538 NOL9Q5SY16 702 aaKnown RBP17.33■□□□□ 0.37
GINS3-203ENST00000426538 FAM160B2Q86V87 743 aa17.33■□□□□ 0.37
GINS3-203ENST00000426538 ZNF280CQ8ND82 737 aa17.33■□□□□ 0.37
GINS3-203ENST00000426538 BICD2Q8TD16 824 aa17.33■□□□□ 0.37
GINS3-203ENST00000426538 COA7Q96BR5 231 aa17.33■□□□□ 0.37
GINS3-203ENST00000426538 CDCA5Q96FF9 252 aa17.33■□□□□ 0.37
GINS3-203ENST00000426538 FEM1BQ9UK73 627 aa17.33■□□□□ 0.37
GINS3-203ENST00000426538 NOL7Q9UMY1 257 aaKnown RBP17.33■□□□□ 0.37
GINS3-203ENST00000426538 CSADQ9Y600 493 aa17.33■□□□□ 0.37
GINS3-203ENST00000426538 CLIC4Q9Y696 253 aa17.33■□□□□ 0.37
GINS3-203ENST00000426538 WDR46O15213 610 aaKnown RBP17.33■□□□□ 0.36
GINS3-203ENST00000426538 PLA2G6O60733 806 aa17.33■□□□□ 0.36
GINS3-203ENST00000426538 YEATS4O95619 227 aa17.33■□□□□ 0.36
GINS3-203ENST00000426538 MTMR2Q13614 643 aa17.33■□□□□ 0.36
GINS3-203ENST00000426538 TTLL12Q14166 644 aaPredicted RBP17.33■□□□□ 0.36
GINS3-203ENST00000426538 DAGLBQ8NCG7 672 aa17.33■□□□□ 0.36
GINS3-203ENST00000426538 KCNG4Q8TDN1 519 aa17.33■□□□□ 0.36
GINS3-203ENST00000426538 DOCK1Q14185 1865 aa17.32■□□□□ 0.36
GINS3-203ENST00000426538 ESYT2A0FGR8 921 aa17.32■□□□□ 0.36
GINS3-203ENST00000426538 NASPP49321 788 aaPredicted RBP17.32■□□□□ 0.36
GINS3-203ENST00000426538 BACE1P56817 501 aa17.32■□□□□ 0.36
GINS3-203ENST00000426538 QRICH1Q2TAL8 776 aa17.32■□□□□ 0.36
GINS3-203ENST00000426538 PPP1R18Q6NYC8 613 aa17.32■□□□□ 0.36
GINS3-203ENST00000426538 LINC00301Q8NCQ3 95 aa17.32■□□□□ 0.36
GINS3-203ENST00000426538 GPT2Q8TD30 523 aa17.32■□□□□ 0.36
GINS3-203ENST00000426538 KIFC2Q96AC6 838 aa17.32■□□□□ 0.36
GINS3-203ENST00000426538 RRAGCQ9HB90 399 aa17.32■□□□□ 0.36
GINS3-203ENST00000426538 PRR12Q9ULL5 1215 aa17.32■□□□□ 0.36
GINS3-203ENST00000426538 CCDC194A0A1B0GVG4 234 aa17.31■□□□□ 0.36
GINS3-203ENST00000426538 TRIM75PA6NK02 468 aa17.31■□□□□ 0.36
GINS3-203ENST00000426538 C19orf81C9J6K1 198 aa17.31■□□□□ 0.36
GINS3-203ENST00000426538 ME1P48163 572 aa17.31■□□□□ 0.36
GINS3-203ENST00000426538 TRAF1Q13077 416 aa17.31■□□□□ 0.36
GINS3-203ENST00000426538 PIK3AP1Q6ZUJ8 805 aa17.31■□□□□ 0.36
GINS3-203ENST00000426538 AMNQ9BXJ7 453 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms