RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 USP17L4A6NCW7 530 aa17.93■□□□□ 0.46
PKP4-205ENST00000426248 TCP10L2B9ZVM9 353 aa17.93■□□□□ 0.46
PKP4-205ENST00000426248 NAA25Q14CX7 972 aa17.93■□□□□ 0.46
PKP4-205ENST00000426248 ARHGAP27Q6ZUM4 889 aa17.93■□□□□ 0.46
PKP4-205ENST00000426248 USP17L1Q7RTZ2 530 aa17.93■□□□□ 0.46
PKP4-205ENST00000426248 PODNQ7Z5L7 613 aa17.93■□□□□ 0.46
PKP4-205ENST00000426248 ZNF274Q96GC6 653 aaPredicted RBP17.93■□□□□ 0.46
PKP4-205ENST00000426248 HINFPQ9BQA5 517 aa17.93■□□□□ 0.46
PKP4-205ENST00000426248 ADAMTS7Q9UKP4 1686 aa17.93■□□□□ 0.46
PKP4-205ENST00000426248 RNF40O75150 1001 aa17.93■□□□□ 0.46
PKP4-205ENST00000426248 NLRP5P59047 1200 aa17.93■□□□□ 0.46
PKP4-205ENST00000426248 ZNF569Q5MCW4 686 aa17.93■□□□□ 0.46
PKP4-205ENST00000426248 APOA5Q6Q788 366 aa17.93■□□□□ 0.46
PKP4-205ENST00000426248 LRRC31Q6UY01 552 aa17.93■□□□□ 0.46
PKP4-205ENST00000426248 PSD3Q9NYI0 1048 aa17.93■□□□□ 0.46
PKP4-205ENST00000426248 CAGE1Q8TC20 777 aa17.93■□□□□ 0.46
PKP4-205ENST00000426248 ZSCAN10Q96SZ4 725 aaPredicted RBP17.93■□□□□ 0.46
PKP4-205ENST00000426248 V9GY48 417 aaPredicted RBP17.93■□□□□ 0.46
PKP4-205ENST00000426248 ATP1A3P13637 1013 aa17.92■□□□□ 0.46
PKP4-205ENST00000426248 HOXA10P31260 410 aaPredicted RBP17.92■□□□□ 0.46
PKP4-205ENST00000426248 ADKP55263 362 aaKnown RBP17.92■□□□□ 0.46
PKP4-205ENST00000426248 CTDP1Q9Y5B0 961 aaPredicted RBP17.92■□□□□ 0.46
PKP4-205ENST00000426248 CTAGE15A4D2H0 777 aa17.92■□□□□ 0.46
PKP4-205ENST00000426248 CTAGE8P0CG41 777 aa17.92■□□□□ 0.46
PKP4-205ENST00000426248 SOGA3Q5TF21 947 aa17.92■□□□□ 0.46
PKP4-205ENST00000426248 CTAGE6Q86UF2 777 aa17.92■□□□□ 0.46
PKP4-205ENST00000426248 CTAGE4Q8IX94 777 aa17.92■□□□□ 0.46
PKP4-205ENST00000426248 BCAS4Q8TDM0 211 aa17.92■□□□□ 0.46
PKP4-205ENST00000426248 POTEB2H3BUK9 544 aa17.92■□□□□ 0.46
PKP4-205ENST00000426248 NMT2O60551 498 aa17.92■□□□□ 0.46
PKP4-205ENST00000426248 FAM160A1Q05DH4 1040 aa17.92■□□□□ 0.46
PKP4-205ENST00000426248 GRIK5Q16478 980 aa17.92■□□□□ 0.46
PKP4-205ENST00000426248 CRY2Q49AN0 593 aa17.92■□□□□ 0.46
PKP4-205ENST00000426248 LAMB4A4D0S4 1761 aa17.92■□□□□ 0.46
PKP4-205ENST00000426248 HNRNPH1P31943 449 aaKnown RBP17.91■□□□□ 0.46
PKP4-205ENST00000426248 CASP8Q14790 479 aa17.91■□□□□ 0.46
PKP4-205ENST00000426248 SCLT1Q96NL6 688 aa17.91■□□□□ 0.46
PKP4-205ENST00000426248 CABP5Q9NP86 173 aa17.91■□□□□ 0.46
PKP4-205ENST00000426248 PEX19P40855 299 aa17.91■□□□□ 0.46
PKP4-205ENST00000426248 GJB4Q9NTQ9 266 aa17.91■□□□□ 0.46
PKP4-205ENST00000426248 ZEB2O60315 1214 aa17.91■□□□□ 0.46
PKP4-205ENST00000426248 CLNS1AP54105 237 aaKnown RBP17.91■□□□□ 0.46
PKP4-205ENST00000426248 TSGA10IPQ3SY00 556 aa17.91■□□□□ 0.46
PKP4-205ENST00000426248 MB21D2Q8IYB1 491 aaPredicted RBP17.91■□□□□ 0.46
PKP4-205ENST00000426248 RTKN2Q8IZC4 609 aa17.91■□□□□ 0.46
PKP4-205ENST00000426248 CEP89Q96ST8 783 aa17.91■□□□□ 0.46
PKP4-205ENST00000426248 IRX2Q9BZI1 471 aaPredicted RBP17.91■□□□□ 0.46
PKP4-205ENST00000426248 SEC63Q9UGP8 760 aaKnown RBP17.91■□□□□ 0.46
PKP4-205ENST00000426248 TCRBV5S4A2TA0A5A2 114 aa17.91■□□□□ 0.46
PKP4-205ENST00000426248 GOLGA6L9A6NEM1 432 aa17.91■□□□□ 0.46
PKP4-205ENST00000426248 ATP2C2O75185 946 aa17.91■□□□□ 0.46
PKP4-205ENST00000426248 CC2D2BQ6DHV5 1058 aa17.91■□□□□ 0.46
PKP4-205ENST00000426248 FAM71BQ8TC56 605 aa17.91■□□□□ 0.46
PKP4-205ENST00000426248 MRPS27Q92552 414 aaKnown RBP17.91■□□□□ 0.46
PKP4-205ENST00000426248 KCNQ5Q9NR82 932 aa17.91■□□□□ 0.46
PKP4-205ENST00000426248 ZBTB12Q9Y330 459 aaPredicted RBP17.91■□□□□ 0.46
PKP4-205ENST00000426248 FAM169AQ9Y6X4 670 aa17.91■□□□□ 0.46
PKP4-205ENST00000426248 FAM196BA6NMK8 535 aa17.9■□□□□ 0.46
PKP4-205ENST00000426248 SMIM22K7EJ46 135 aa17.9■□□□□ 0.46
PKP4-205ENST00000426248 MROH7-TTC4A0A0A0MT08 1334 aa17.9■□□□□ 0.46
PKP4-205ENST00000426248 CEP112Q8N8E3 955 aa17.9■□□□□ 0.46
PKP4-205ENST00000426248 OSBPL5Q9H0X9 879 aaPredicted RBP17.9■□□□□ 0.46
PKP4-205ENST00000426248 TDRD3Q9H7E2 651 aaKnown RBP17.9■□□□□ 0.46
PKP4-205ENST00000426248 NSUN7Q8NE18 718 aaKnown RBP17.9■□□□□ 0.46
PKP4-205ENST00000426248 FAM76AQ8TAV0 307 aa17.9■□□□□ 0.46
PKP4-205ENST00000426248 LLPHQ9BRT6 129 aaKnown RBP17.9■□□□□ 0.46
PKP4-205ENST00000426248 ZSCAN16Q9H4T2 348 aaPredicted RBP17.9■□□□□ 0.46
PKP4-205ENST00000426248 SH2B2O14492 632 aaPredicted RBP17.89■□□□□ 0.45
PKP4-205ENST00000426248 GBP2P32456 591 aaPredicted RBP17.89■□□□□ 0.45
PKP4-205ENST00000426248 FKBP15Q5T1M5 1219 aa17.89■□□□□ 0.45
PKP4-205ENST00000426248 HEATR3Q7Z4Q2 680 aa17.89■□□□□ 0.45
PKP4-205ENST00000426248 FANCBQ8NB91 859 aa17.89■□□□□ 0.45
PKP4-205ENST00000426248 KCNJ14Q9UNX9 436 aa17.89■□□□□ 0.45
PKP4-205ENST00000426248 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.89■□□□□ 0.45
PKP4-205ENST00000426248 GOLGA8HP0CJ92 632 aa17.89■□□□□ 0.45
PKP4-205ENST00000426248 CRKP46108 304 aa17.89■□□□□ 0.45
PKP4-205ENST00000426248 PRPF38AQ8NAV1 312 aaKnown RBP17.89■□□□□ 0.45
PKP4-205ENST00000426248 SLC16A10Q8TF71 515 aa17.89■□□□□ 0.45
PKP4-205ENST00000426248 AIFM3Q96NN9 605 aa17.89■□□□□ 0.45
PKP4-205ENST00000426248 SENP2Q9HC62 589 aa17.89■□□□□ 0.45
PKP4-205ENST00000426248 STYK1Q6J9G0 422 aa17.89■□□□□ 0.45
PKP4-205ENST00000426248 NRAPQ86VF7 1730 aa17.89■□□□□ 0.45
PKP4-205ENST00000426248 ARHGAP6O43182 974 aa17.88■□□□□ 0.45
PKP4-205ENST00000426248 ALX1Q15699 326 aa17.88■□□□□ 0.45
PKP4-205ENST00000426248 USP28Q96RU2 1077 aa17.88■□□□□ 0.45
PKP4-205ENST00000426248 TAOK3Q9H2K8 898 aa17.88■□□□□ 0.45
PKP4-205ENST00000426248 GOLPH3LQ9H4A5 285 aa17.88■□□□□ 0.45
PKP4-205ENST00000426248 GPCPD1Q9NPB8 672 aa17.88■□□□□ 0.45
PKP4-205ENST00000426248 DAGLAQ9Y4D2 1042 aa17.88■□□□□ 0.45
PKP4-205ENST00000426248 NDUFAB1O14561 156 aa17.88■□□□□ 0.45
PKP4-205ENST00000426248 MARCKSP29966 332 aaPredicted RBP17.88■□□□□ 0.45
PKP4-205ENST00000426248 EXOSC10Q01780 885 aaKnown RBP17.88■□□□□ 0.45
PKP4-205ENST00000426248 RIOK1Q9BRS2 568 aaKnown RBP17.88■□□□□ 0.45
PKP4-205ENST00000426248 TMED8Q6PL24 325 aaPredicted RBP17.87■□□□□ 0.45
PKP4-205ENST00000426248 PPFIBP1Q86W92 1011 aa17.87■□□□□ 0.45
PKP4-205ENST00000426248 RIN2Q8WYP3 895 aaPredicted RBP17.87■□□□□ 0.45
PKP4-205ENST00000426248 ODF2LQ9ULJ1 636 aa17.87■□□□□ 0.45
PKP4-205ENST00000426248 NUP98P52948 1817 aa17.87■□□□□ 0.45
PKP4-205ENST00000426248 ZYXQ15942 572 aaKnown RBP17.87■□□□□ 0.45
PKP4-205ENST00000426248 POTEDQ86YR6 584 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms