RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 INHAP05111 366 aa12.89□□□□□ -0.35
USP49-204ENST00000423567 TOP1P11387 765 aaKnown RBP12.89□□□□□ -0.35
USP49-204ENST00000423567 XRCC5P13010 732 aaKnown RBP12.89□□□□□ -0.35
USP49-204ENST00000423567 ERCC3P19447 782 aa12.89□□□□□ -0.35
USP49-204ENST00000423567 PTPREP23469 700 aa12.89□□□□□ -0.35
USP49-204ENST00000423567 MORN1Q5T089 497 aa12.89□□□□□ -0.35
USP49-204ENST00000423567 CASC1Q6TDU7 716 aa12.89□□□□□ -0.35
USP49-204ENST00000423567 IQCA1Q86XH1 822 aa12.89□□□□□ -0.35
USP49-204ENST00000423567 NKX2-3Q8TAU0 364 aa12.89□□□□□ -0.35
USP49-204ENST00000423567 CHURC1Q8WUH1 139 aa12.89□□□□□ -0.35
USP49-204ENST00000423567 KIFC2Q96AC6 838 aa12.89□□□□□ -0.35
USP49-204ENST00000423567 GMCL1Q96IK5 515 aa12.89□□□□□ -0.35
USP49-204ENST00000423567 TTC14Q96N46 770 aa12.89□□□□□ -0.35
USP49-204ENST00000423567 APBA2Q99767 749 aa12.89□□□□□ -0.35
USP49-204ENST00000423567 NBPF3Q9H094 633 aa12.89□□□□□ -0.35
USP49-204ENST00000423567 RNF208Q9H0X6 261 aa12.89□□□□□ -0.35
USP49-204ENST00000423567 SLC5A4Q9NY91 659 aa12.89□□□□□ -0.35
USP49-204ENST00000423567 ADAMTS5Q9UNA0 930 aa12.89□□□□□ -0.35
USP49-204ENST00000423567 TACC3Q9Y6A5 838 aa12.89□□□□□ -0.35
USP49-204ENST00000423567 NEDD4P46934 1319 aa12.88□□□□□ -0.35
USP49-204ENST00000423567 TMEM232C9JQI7 657 aa12.88□□□□□ -0.35
USP49-204ENST00000423567 KDM4AO75164 1064 aa12.88□□□□□ -0.35
USP49-204ENST00000423567 FDX1P10109 184 aa12.88□□□□□ -0.35
USP49-204ENST00000423567 CCL5P13501 91 aa12.88□□□□□ -0.35
USP49-204ENST00000423567 ZKSCAN1P17029 563 aaPredicted RBP12.88□□□□□ -0.35
USP49-204ENST00000423567 MCCP23508 829 aa12.88□□□□□ -0.35
USP49-204ENST00000423567 TIE1P35590 1138 aa12.88□□□□□ -0.35
USP49-204ENST00000423567 STAT3P40763 770 aa12.88□□□□□ -0.35
USP49-204ENST00000423567 STAT2P52630 851 aa12.88□□□□□ -0.35
USP49-204ENST00000423567 TRDNQ13061 729 aa12.88□□□□□ -0.35
USP49-204ENST00000423567 MAP2K5Q13163 448 aa12.88□□□□□ -0.35
USP49-204ENST00000423567 TMEM132BQ14DG7 1078 aa12.88□□□□□ -0.35
USP49-204ENST00000423567 MTFR1Q15390 333 aa12.88□□□□□ -0.35
USP49-204ENST00000423567 CCDC96Q2M329 555 aa12.88□□□□□ -0.35
USP49-204ENST00000423567 ERICH6BQ5W0A0 696 aa12.88□□□□□ -0.35
USP49-204ENST00000423567 FAM160B2Q86V87 743 aa12.88□□□□□ -0.35
USP49-204ENST00000423567 RIOX2Q8IUF8 465 aa12.88□□□□□ -0.35
USP49-204ENST00000423567 IL25Q9H293 177 aa12.88□□□□□ -0.35
USP49-204ENST00000423567 BMP2KQ9NSY1 1161 aaPredicted RBP12.88□□□□□ -0.35
USP49-204ENST00000423567 MTMR7Q9Y216 660 aa12.88□□□□□ -0.35
USP49-204ENST00000423567 MGAMO43451 1857 aa12.88□□□□□ -0.35
USP49-204ENST00000423567 POTEFA5A3E0 1075 aa12.87□□□□□ -0.35
USP49-204ENST00000423567 B4E1Z4 1266 aa12.87□□□□□ -0.35
USP49-204ENST00000423567 GRB14Q14449 540 aa12.87□□□□□ -0.35
USP49-204ENST00000423567 RCSD1Q6JBY9 416 aa12.87□□□□□ -0.35
USP49-204ENST00000423567 DPP9Q86TI2 863 aa12.87□□□□□ -0.35
USP49-204ENST00000423567 DCAF4Q8WV16 495 aa12.87□□□□□ -0.35
USP49-204ENST00000423567 USP6NLQ92738 828 aa12.87□□□□□ -0.35
USP49-204ENST00000423567 CHMP4CQ96CF2 233 aa12.87□□□□□ -0.35
USP49-204ENST00000423567 TMEM47Q9BQJ4 181 aa12.87□□□□□ -0.35
USP49-204ENST00000423567 UBAC1Q9BSL1 405 aa12.87□□□□□ -0.35
USP49-204ENST00000423567 TEX13BQ9BXU2 312 aa12.87□□□□□ -0.35
USP49-204ENST00000423567 GJB1P08034 283 aa12.86□□□□□ -0.35
USP49-204ENST00000423567 FCER1AP12319 257 aa12.86□□□□□ -0.35
USP49-204ENST00000423567 NOVP48745 357 aa12.86□□□□□ -0.35
USP49-204ENST00000423567 ATN1P54259 1190 aaPredicted RBP12.86□□□□□ -0.35
USP49-204ENST00000423567 PTH1RQ03431 593 aa12.86□□□□□ -0.35
USP49-204ENST00000423567 KCTD2Q14681 263 aa12.86□□□□□ -0.35
USP49-204ENST00000423567 MFSD14CQ5VZR4 134 aa12.86□□□□□ -0.35
USP49-204ENST00000423567 SNRNP48Q6IEG0 339 aaKnown RBP12.86□□□□□ -0.35
USP49-204ENST00000423567 KCTD1Q719H9 257 aa12.86□□□□□ -0.35
USP49-204ENST00000423567 RALYLQ86SE5 291 aaKnown RBP12.86□□□□□ -0.35
USP49-204ENST00000423567 DGKHQ86XP1 1220 aa12.86□□□□□ -0.35
USP49-204ENST00000423567 ABRAQ8N0Z2 381 aa12.86□□□□□ -0.35
USP49-204ENST00000423567 CPXCR1Q8N123 301 aa12.86□□□□□ -0.35
USP49-204ENST00000423567 TRIB2Q92519 343 aa12.86□□□□□ -0.35
USP49-204ENST00000423567 ZKSCAN3Q9BRR0 538 aa12.86□□□□□ -0.35
USP49-204ENST00000423567 UNC93B1Q9H1C4 597 aa12.86□□□□□ -0.35
USP49-204ENST00000423567 HMX1Q9NP08 348 aaPredicted RBP12.86□□□□□ -0.35
USP49-204ENST00000423567 PPP4R2Q9NY27 417 aa12.86□□□□□ -0.35
USP49-204ENST00000423567 ATP2A1O14983 1001 aa12.85□□□□□ -0.35
USP49-204ENST00000423567 PLA2G6O60733 806 aa12.85□□□□□ -0.35
USP49-204ENST00000423567 CDC45O75419 566 aa12.85□□□□□ -0.35
USP49-204ENST00000423567 HOXC6P09630 235 aa12.85□□□□□ -0.35
USP49-204ENST00000423567 CAPN2P17655 700 aa12.85□□□□□ -0.35
USP49-204ENST00000423567 EN2P19622 333 aaPredicted RBP12.85□□□□□ -0.35
USP49-204ENST00000423567 ADORA2AP29274 412 aa12.85□□□□□ -0.35
USP49-204ENST00000423567 SLC4A3P48751 1232 aa12.85□□□□□ -0.35
USP49-204ENST00000423567 OAZ1P54368 228 aa12.85□□□□□ -0.35
USP49-204ENST00000423567 SKAP1Q86WV1 359 aa12.85□□□□□ -0.35
USP49-204ENST00000423567 REPS2Q8NFH8 660 aa12.85□□□□□ -0.35
USP49-204ENST00000423567 ZSCAN10Q96SZ4 725 aaPredicted RBP12.85□□□□□ -0.35
USP49-204ENST00000423567 MMP19Q99542 508 aa12.85□□□□□ -0.35
USP49-204ENST00000423567 ESYT1Q9BSJ8 1104 aa12.85□□□□□ -0.35
USP49-204ENST00000423567 KAT14Q9H8E8 782 aa12.85□□□□□ -0.35
USP49-204ENST00000423567 SLC38A10Q9HBR0 1119 aa12.85□□□□□ -0.35
USP49-204ENST00000423567 ZNF214Q9UL59 606 aaPredicted RBP12.85□□□□□ -0.35
USP49-204ENST00000423567 RPTORQ8N122 1335 aa12.85□□□□□ -0.35
USP49-204ENST00000423567 CYP21A2P08686 494 aa12.84□□□□□ -0.35
USP49-204ENST00000423567 NCOA7Q8NI08 942 aa12.84□□□□□ -0.35
USP49-204ENST00000423567 U2AF1L4Q8WU68 220 aaKnown RBP12.84□□□□□ -0.35
USP49-204ENST00000423567 MAP4K1Q92918 833 aa12.84□□□□□ -0.35
USP49-204ENST00000423567 DEFB118Q96PH6 123 aa12.84□□□□□ -0.35
USP49-204ENST00000423567 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.84□□□□□ -0.35
USP49-204ENST00000423567 RAVER2Q9HCJ3 691 aaKnown RBP12.84□□□□□ -0.35
USP49-204ENST00000423567 ANO2Q9NQ90 1003 aa12.84□□□□□ -0.35
USP49-204ENST00000423567 ZSWIM5Q9P217 1185 aa12.84□□□□□ -0.35
USP49-204ENST00000423567 FBXO40Q9UH90 709 aa12.84□□□□□ -0.35
USP49-204ENST00000423567 RBM8AQ9Y5S9 174 aaKnown RBP12.84□□□□□ -0.35
USP49-204ENST00000423567 A0A0G2JMZ2 1700 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms