RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 CACNA1FO60840 1977 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 CAND2O75155 1236 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 ERLIN2O94905 339 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 TRAPPC10P48553 1259 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 ARPP19P56211 112 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 MTMR3Q13615 1198 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 GNASQ5JWF2 1037 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 TDRD7Q8NHU6 1098 aaKnown RBP4.04□□□□□ -1.76
TOP2A-201ENST00000423485 RPGRIP1Q96KN7 1286 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 SPATA6Q9NWH7 488 aaPredicted RBP4.04□□□□□ -1.76
TOP2A-201ENST00000423485 HOOK1Q9UJC3 728 aaKnown RBP4.04□□□□□ -1.76
TOP2A-201ENST00000423485 TPCN1Q9ULQ1 816 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.04□□□□□ -1.764e-6■■□□□ 14.2
TOP2A-201ENST00000423485 TLL2Q9Y6L7 1015 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 KIF1BO60333 1816 aa4.04□□□□□ -1.76
TOP2A-201ENST00000423485 RANBP6O60518 1105 aaKnown RBP4.03□□□□□ -1.76
TOP2A-201ENST00000423485 CCINQ13939 588 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 BTG3Q14201 252 aaPredicted RBP4.03□□□□□ -1.76
TOP2A-201ENST00000423485 TTLL4Q14679 1199 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 CLEC4GQ6UXB4 293 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.03□□□□□ -1.76
TOP2A-201ENST00000423485 TMC7Q7Z402 723 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 HOMEZQ8IX15 550 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 SP8Q8IXZ3 490 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 ANKRD20A12PQ8NF67 263 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 ERMNQ8TAM6 284 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 PGBD4Q96DM1 585 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 NAPBQ9H115 298 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 BCAS3Q9H6U6 928 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 FAN1Q9Y2M0 1017 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 RTL1A6NKG5 1358 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 NEDD4P46934 1319 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 ARHGAP31Q2M1Z3 1444 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 A0A0U1RQG5 324 aaPredicted RBP4.03□□□□□ -1.76
TOP2A-201ENST00000423485 ASNSP08243 561 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 NDUFV2P19404 249 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 GCKP35557 465 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 ALDH7A1P49419 539 aaKnown RBP4.03□□□□□ -1.76
TOP2A-201ENST00000423485 CREMQ03060 361 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 FLIIQ13045 1269 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 SH3TC2Q8TF17 1288 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 NEK1Q96PY6 1258 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 PTPRCP08575 1304 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 ZBED9Q6R2W3 1325 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 MAP3K15Q6ZN16 1313 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 FAM205AQ6ZU69 1335 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 RHOBTB1O94844 696 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 SLC25A27O95847 323 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 SCNN1DP51172 638 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 STARD3Q14849 445 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 TMEM266Q2M3C6 531 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 RABEPKQ7Z6M1 372 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 ALYREFQ86V81 257 aaKnown RBP4.03□□□□□ -1.76
TOP2A-201ENST00000423485 TDHQ8IZJ6 230 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 MB21D1Q8N884 522 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 FSD1Q9BTV5 496 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 TLE6Q9H808 572 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 NRBP2Q9NSY0 501 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 TPX2Q9ULW0 747 aaKnown RBP4.03□□□□□ -1.76
TOP2A-201ENST00000423485 C5P01031 1676 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 MYH15Q9Y2K3 1946 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 KLHL41O60662 606 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 CALML3P27482 149 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 AFMP43652 599 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 TFDP1Q14186 410 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 UBXN2BQ14CS0 331 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 ANO6Q4KMQ2 910 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 CABP7Q86V35 215 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 PPFIBP1Q86W92 1011 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 GSDMBQ8TAX9 411 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 TRIM35Q9UPQ4 493 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 SUGT1Q9Y2Z0 365 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 DIP2AQ14689 1571 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 ECM29Q5VYK3 1845 aa4.03□□□□□ -1.76
TOP2A-201ENST00000423485 PRR5-ARHGAP8B1AHC4 643 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 ATG13O75143 517 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 OATP04181 439 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 HSPA8P11142 646 aaKnown RBP4.02□□□□□ -1.77
TOP2A-201ENST00000423485 CYP7A1P22680 504 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 ID4P47928 161 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 KCNQ4P56696 695 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 ARHGAP8P85298 464 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 SRSF11Q05519 484 aaKnown RBP4.02□□□□□ -1.77
TOP2A-201ENST00000423485 COL13A1Q5TAT6 717 aaPredicted RBP4.02□□□□□ -1.77
TOP2A-201ENST00000423485 KANK3Q6NY19 840 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 TRMT1LQ7Z2T5 733 aaKnown RBP4.02□□□□□ -1.77
TOP2A-201ENST00000423485 C11orf74Q86VG3 221 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 TRPM4Q8TD43 1214 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 OPTNQ96CV9 577 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 CAMKK2Q96RR4 588 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 AMNQ9BXJ7 453 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 MYOZ2Q9NPC6 264 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 SCUBE2Q9NQ36 999 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 STK39Q9UEW8 545 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 SRP68Q9UHB9 627 aaKnown RBP4.02□□□□□ -1.77
TOP2A-201ENST00000423485 MYOM2P54296 1465 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 USP17L12C9JPN9 530 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 USP17L21D6R901 530 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 MLYCDO95822 493 aa4.02□□□□□ -1.77
TOP2A-201ENST00000423485 SSBP05455 408 aaKnown RBP eCLIP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms