RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 DPP9Q86TI2 863 aa18.32■□□□□ 0.52
SPC24-201ENST00000423327 PRPF38AQ8NAV1 312 aaKnown RBP18.32■□□□□ 0.52
SPC24-201ENST00000423327 KIFC2Q96AC6 838 aa18.32■□□□□ 0.52
SPC24-201ENST00000423327 GMCL1Q96IK5 515 aa18.32■□□□□ 0.52
SPC24-201ENST00000423327 SLC38A10Q9HBR0 1119 aa18.32■□□□□ 0.52
SPC24-201ENST00000423327 FEM1BQ9UK73 627 aa18.32■□□□□ 0.52
SPC24-201ENST00000423327 TMEM232C9JQI7 657 aa18.31■□□□□ 0.52
SPC24-201ENST00000423327 PGK2P07205 417 aa18.31■□□□□ 0.52
SPC24-201ENST00000423327 FCER1AP12319 257 aa18.31■□□□□ 0.52
SPC24-201ENST00000423327 MCCP23508 829 aa18.31■□□□□ 0.52
SPC24-201ENST00000423327 RRP12Q5JTH9 1297 aaKnown RBP18.31■□□□□ 0.52
SPC24-201ENST00000423327 AKNAD1Q5T1N1 836 aa18.31■□□□□ 0.52
SPC24-201ENST00000423327 MFSD14CQ5VZR4 134 aa18.31■□□□□ 0.52
SPC24-201ENST00000423327 SNRNP48Q6IEG0 339 aaKnown RBP18.31■□□□□ 0.52
SPC24-201ENST00000423327 ANKLE1Q8NAG6 615 aa18.31■□□□□ 0.52
SPC24-201ENST00000423327 MAML3Q96JK9 1138 aa18.31■□□□□ 0.52
SPC24-201ENST00000423327 MMP19Q99542 508 aa18.31■□□□□ 0.52
SPC24-201ENST00000423327 TEX13BQ9BXU2 312 aa18.31■□□□□ 0.52
SPC24-201ENST00000423327 PFASO15067 1338 aa18.3■□□□□ 0.52
SPC24-201ENST00000423327 H0YGN5 161 aa18.3■□□□□ 0.52
SPC24-201ENST00000423327 HIP1O00291 1037 aa18.3■□□□□ 0.52
SPC24-201ENST00000423327 CAPN2P17655 700 aa18.3■□□□□ 0.52
SPC24-201ENST00000423327 MFAP1P55081 439 aaKnown RBP18.3■□□□□ 0.52
SPC24-201ENST00000423327 RCSD1Q6JBY9 416 aa18.3■□□□□ 0.52
SPC24-201ENST00000423327 KCTD1Q719H9 257 aa18.3■□□□□ 0.52
SPC24-201ENST00000423327 DSCC1Q9BVC3 393 aa18.3■□□□□ 0.52
SPC24-201ENST00000423327 RAVER2Q9HCJ3 691 aaKnown RBP18.3■□□□□ 0.52
SPC24-201ENST00000423327 TOMM22Q9NS69 142 aa18.3■□□□□ 0.52
SPC24-201ENST00000423327 SMCHD1A6NHR9 2005 aa18.3■□□□□ 0.52
SPC24-201ENST00000423327 ZNF536O15090 1300 aa18.29■□□□□ 0.52
SPC24-201ENST00000423327 SLC1A4P43007 532 aa18.29■□□□□ 0.52
SPC24-201ENST00000423327 ZNF792Q3KQV3 632 aa18.29■□□□□ 0.52
SPC24-201ENST00000423327 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.29■□□□□ 0.52
SPC24-201ENST00000423327 CPXCR1Q8N123 301 aa18.29■□□□□ 0.52
SPC24-201ENST00000423327 TMEM47Q9BQJ4 181 aa18.29■□□□□ 0.52
SPC24-201ENST00000423327 HTATIP2Q9BUP3 242 aa18.29■□□□□ 0.52
SPC24-201ENST00000423327 TCP11L1Q9NUJ3 509 aa18.29■□□□□ 0.52
SPC24-201ENST00000423327 COPB2P35606 906 aa18.28■□□□□ 0.52
SPC24-201ENST00000423327 STAT2P52630 851 aa18.28■□□□□ 0.52
SPC24-201ENST00000423327 PPP4R3BQ5MIZ7 849 aa18.28■□□□□ 0.52
SPC24-201ENST00000423327 PRAMEF19Q5SWL8 479 aa18.28■□□□□ 0.52
SPC24-201ENST00000423327 NECAB2Q7Z6G3 386 aa18.28■□□□□ 0.52
SPC24-201ENST00000423327 DPF3Q92784 378 aa18.28■□□□□ 0.52
SPC24-201ENST00000423327 DDX20Q9UHI6 824 aaKnown RBP18.28■□□□□ 0.52
SPC24-201ENST00000423327 LCTP09848 1927 aa18.27■□□□□ 0.52
SPC24-201ENST00000423327 DNAJC25-GNG10A0A024R161 153 aa18.27■□□□□ 0.52
SPC24-201ENST00000423327 PLA2G6O60733 806 aa18.27■□□□□ 0.52
SPC24-201ENST00000423327 ZBED4O75132 1171 aa18.27■□□□□ 0.52
SPC24-201ENST00000423327 COL6A1P12109 1028 aa18.27■□□□□ 0.52
SPC24-201ENST00000423327 TAL1P17542 331 aaPredicted RBP18.27■□□□□ 0.52
SPC24-201ENST00000423327 SNAP25P60880 206 aa18.27■□□□□ 0.52
SPC24-201ENST00000423327 KCTD2Q14681 263 aa18.27■□□□□ 0.52
SPC24-201ENST00000423327 MFSD6Q6ZSS7 791 aa18.27■□□□□ 0.52
SPC24-201ENST00000423327 FGD4Q96M96 766 aa18.27■□□□□ 0.52
SPC24-201ENST00000423327 MTMR7Q9Y216 660 aa18.27■□□□□ 0.52
SPC24-201ENST00000423327 MCM3APO60318 1980 aa18.27■□□□□ 0.52
SPC24-201ENST00000423327 RANBP2P49792 3224 aaKnown RBP18.27■□□□□ 0.52
SPC24-201ENST00000423327 PCP11498 1178 aaKnown RBP18.26■□□□□ 0.51
SPC24-201ENST00000423327 CHMLP26374 656 aa18.26■□□□□ 0.51
SPC24-201ENST00000423327 OAZ1P54368 228 aa18.26■□□□□ 0.51
SPC24-201ENST00000423327 TTBK2Q6IQ55 1244 aa18.26■□□□□ 0.51
SPC24-201ENST00000423327 FAM160B2Q86V87 743 aa18.26■□□□□ 0.51
SPC24-201ENST00000423327 SKAP1Q86WV1 359 aa18.26■□□□□ 0.51
SPC24-201ENST00000423327 C11orf49Q9H6J7 331 aa18.26■□□□□ 0.51
SPC24-201ENST00000423327 ISY1Q9ULR0 285 aaKnown RBP18.26■□□□□ 0.51
SPC24-201ENST00000423327 RAD50Q92878 1312 aa18.25■□□□□ 0.51
SPC24-201ENST00000423327 ZNF213O14771 459 aa18.25■□□□□ 0.51
SPC24-201ENST00000423327 TOP1P11387 765 aaKnown RBP18.25■□□□□ 0.51
SPC24-201ENST00000423327 CNGA1P29973 690 aa18.25■□□□□ 0.51
SPC24-201ENST00000423327 SLC4A3P48751 1232 aa18.25■□□□□ 0.51
SPC24-201ENST00000423327 ANO1Q5XXA6 986 aa18.25■□□□□ 0.51
SPC24-201ENST00000423327 DCAF4Q8WV16 495 aa18.25■□□□□ 0.51
SPC24-201ENST00000423327 AGBL1Q96MI9 1066 aa18.25■□□□□ 0.51
SPC24-201ENST00000423327 ZKSCAN3Q9BRR0 538 aa18.25■□□□□ 0.51
SPC24-201ENST00000423327 RNF41Q9H4P4 317 aaPredicted RBP18.25■□□□□ 0.51
SPC24-201ENST00000423327 SLC5A4Q9NY91 659 aa18.25■□□□□ 0.51
SPC24-201ENST00000423327 PRR12Q9ULL5 1215 aa18.25■□□□□ 0.51
SPC24-201ENST00000423327 DIS3Q9Y2L1 958 aaKnown RBP18.25■□□□□ 0.51
SPC24-201ENST00000423327 TRIOBPQ9H2D6 2365 aa18.25■□□□□ 0.51
SPC24-201ENST00000423327 FRMPD2Q68DX3 1309 aaPredicted RBP18.24■□□□□ 0.51
SPC24-201ENST00000423327 KDM4AO75164 1064 aa18.24■□□□□ 0.51
SPC24-201ENST00000423327 PDHBP11177 359 aa18.24■□□□□ 0.51
SPC24-201ENST00000423327 SLC16A2P36021 539 aa18.24■□□□□ 0.51
SPC24-201ENST00000423327 PTH1RQ03431 593 aa18.24■□□□□ 0.51
SPC24-201ENST00000423327 IKQ13123 557 aaPredicted RBP18.24■□□□□ 0.51
SPC24-201ENST00000423327 CCDC96Q2M329 555 aa18.24■□□□□ 0.51
SPC24-201ENST00000423327 BTNL9Q6UXG8 535 aa18.24■□□□□ 0.51
SPC24-201ENST00000423327 CHURC1Q8WUH1 139 aa18.24■□□□□ 0.51
SPC24-201ENST00000423327 TINF2Q9BSI4 451 aa18.24■□□□□ 0.51
SPC24-201ENST00000423327 HOMER2Q9NSB8 354 aa18.24■□□□□ 0.51
SPC24-201ENST00000423327 PCDH10Q9P2E7 1040 aa18.24■□□□□ 0.51
SPC24-201ENST00000423327 COLQQ9Y215 455 aaPredicted RBP18.24■□□□□ 0.51
SPC24-201ENST00000423327 LRRC37A2A6NM11 1700 aa18.23■□□□□ 0.51
SPC24-201ENST00000423327 B4E1Z4 1266 aa18.23■□□□□ 0.51
SPC24-201ENST00000423327 SEPT4O43236 478 aa18.23■□□□□ 0.51
SPC24-201ENST00000423327 SNHG28P0DPA3 235 aa18.23■□□□□ 0.51
SPC24-201ENST00000423327 CHST13Q8NET6 341 aa18.23■□□□□ 0.51
SPC24-201ENST00000423327 ESR2Q92731 530 aa18.23■□□□□ 0.51
SPC24-201ENST00000423327 EVI5O60447 810 aa18.22■□□□□ 0.51
SPC24-201ENST00000423327 MSCO60682 206 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms