RNA–Protein interactions for RNA: ENST00000422622.3

SSPN-202, Transcript of sarcospan, humanhuman

TSL 2 BASIC

Gene SSPN, Length 4,348 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-202ENST00000422622 POLR3EQ9NVU0 708 aa11.35□□□□□ -0.59
SSPN-202ENST00000422622 ELP1O95163 1332 aa11.35□□□□□ -0.59
SSPN-202ENST00000422622 CCDC178Q5BJE1 867 aa11.35□□□□□ -0.59
SSPN-202ENST00000422622 CCDC181Q5TID7 509 aa11.35□□□□□ -0.59
SSPN-202ENST00000422622 SLFN13Q68D06 897 aa11.35□□□□□ -0.59
SSPN-202ENST00000422622 DTHD1Q6ZMT9 781 aa11.35□□□□□ -0.59
SSPN-202ENST00000422622 TICAM2Q86XR7 235 aa11.35□□□□□ -0.59
SSPN-202ENST00000422622 TMEM87AQ8NBN3 555 aa11.35□□□□□ -0.59
SSPN-202ENST00000422622 TCP11L1Q9NUJ3 509 aa11.35□□□□□ -0.59
SSPN-202ENST00000422622 EARS2Q5JPH6 523 aaKnown RBP11.35□□□□□ -0.59
SSPN-202ENST00000422622 GPIHBP1Q8IV16 184 aa11.35□□□□□ -0.59
SSPN-202ENST00000422622 SYMPKQ92797 1274 aaKnown RBP11.35□□□□□ -0.59
SSPN-202ENST00000422622 TMEM260Q9NX78 707 aa11.35□□□□□ -0.59
SSPN-202ENST00000422622 DDTLA6NHG4 134 aaPredicted RBP11.34□□□□□ -0.59
SSPN-202ENST00000422622 PRPF3O43395 683 aaKnown RBP11.34□□□□□ -0.59
SSPN-202ENST00000422622 ORC4O43929 436 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 TTLL1O95922 423 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 IL1R1P14778 569 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 CT47A1Q5JQC4 288 aaPredicted RBP11.34□□□□□ -0.59
SSPN-202ENST00000422622 DGKHQ86XP1 1220 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 GPATCH11Q8N954 259 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 ZNHIT6Q9NWK9 470 aaKnown RBP11.34□□□□□ -0.59
SSPN-202ENST00000422622 CALCOCO1Q9P1Z2 691 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 ADAMTS7Q9UKP4 1686 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 CFBP00751 764 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 CDR1P51861 262 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 SNW1Q13573 536 aaKnown RBP11.34□□□□□ -0.59
SSPN-202ENST00000422622 WDR78Q5VTH9 848 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 CC2D2BQ6DHV5 1058 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 REXO1Q8N1G1 1221 aaKnown RBP11.34□□□□□ -0.59
SSPN-202ENST00000422622 PRM3Q9NNZ6 103 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 MAGEC2Q9UBF1 373 aaPredicted RBP11.34□□□□□ -0.59
SSPN-202ENST00000422622 PP2D1A8MPX8 630 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 CUTAO60888 179 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 GNA11P29992 359 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 TECP42680 631 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 KARSQ15046 597 aaKnown RBP11.34□□□□□ -0.59
SSPN-202ENST00000422622 ODF2Q5BJF6 829 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 TAX1BP1Q86VP1 789 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 GJA10Q969M2 543 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 OSBPL5Q9H0X9 879 aaPredicted RBP11.34□□□□□ -0.59
SSPN-202ENST00000422622 TAOK3Q9H2K8 898 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 IFNKQ9P0W0 207 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 KIAA1468Q9P260 1216 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 EEF2P13639 858 aaKnown RBP11.34□□□□□ -0.59
SSPN-202ENST00000422622 MCM6Q14566 821 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 WWC2Q6AWC2 1192 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 ATL3Q6DD88 541 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 PI4KBQ9UBF8 816 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 PCDHA5Q9Y5H7 936 aa11.34□□□□□ -0.59
SSPN-202ENST00000422622 USP17L10C9JJH3 530 aa11.33□□□□□ -0.6
SSPN-202ENST00000422622 RRAGBQ5VZM2 374 aa11.33□□□□□ -0.6
SSPN-202ENST00000422622 IL17RAQ96F46 866 aa11.33□□□□□ -0.6
SSPN-202ENST00000422622 CRACR2AQ9BSW2 395 aa11.33□□□□□ -0.6
SSPN-202ENST00000422622 TMEM39BQ9GZU3 492 aa11.33□□□□□ -0.6
SSPN-202ENST00000422622 NRBP1Q9UHY1 535 aa11.33□□□□□ -0.6
SSPN-202ENST00000422622 DNAI1Q9UI46 699 aa11.33□□□□□ -0.6
SSPN-202ENST00000422622 FZD1Q9UP38 647 aa11.33□□□□□ -0.6
SSPN-202ENST00000422622 WDR19Q8NEZ3 1342 aa11.33□□□□□ -0.6
SSPN-202ENST00000422622 PCP11498 1178 aaKnown RBP11.33□□□□□ -0.6
SSPN-202ENST00000422622 CMA1P23946 247 aa11.33□□□□□ -0.6
SSPN-202ENST00000422622 GNG11P61952 73 aa11.33□□□□□ -0.6
SSPN-202ENST00000422622 SHC4Q6S5L8 630 aa11.33□□□□□ -0.6
SSPN-202ENST00000422622 TANGO6Q9C0B7 1094 aa11.33□□□□□ -0.6
SSPN-202ENST00000422622 FOXP1Q9H334 677 aaPredicted RBP11.33□□□□□ -0.6
SSPN-202ENST00000422622 CBFA2T2O43439 604 aa11.33□□□□□ -0.6
SSPN-202ENST00000422622 CHMP2AO43633 222 aa11.33□□□□□ -0.6
SSPN-202ENST00000422622 U2AF2P26368 475 aaKnown RBP eCLIP11.33□□□□□ -0.6
SSPN-202ENST00000422622 PLS1Q14651 629 aa11.33□□□□□ -0.6
SSPN-202ENST00000422622 SAMD7Q7Z3H4 446 aa11.33□□□□□ -0.6
SSPN-202ENST00000422622 SMTNL1A8MU46 457 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 USP17L15C9J2P7 530 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 USP17L13C9JLJ4 530 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 USP17L11C9JVI0 530 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 USP17L18D6R9N7 530 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 USP17L22D6RA61 530 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 USP17L17D6RBQ6 530 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 USP17L19D6RCP7 530 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 USP17L20D6RJB6 530 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 RHBDL3P58872 404 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 SP4Q02446 784 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 USP17L24Q0WX57 530 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 PPP2R5BQ15173 497 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 NONOQ15233 471 aaKnown RBP eCLIP11.32□□□□□ -0.6
SSPN-202ENST00000422622 ENOX2Q16206 610 aaKnown RBP11.32□□□□□ -0.6
SSPN-202ENST00000422622 SBK1Q52WX2 424 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 STRIP1Q5VSL9 837 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 USP17L6PQ6QN14 398 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 KRT222Q8N1A0 295 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 SRRTQ9BXP5 876 aaKnown RBP11.32□□□□□ -0.6
SSPN-202ENST00000422622 ANAPC4Q9UJX5 808 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 PCDHA1Q9Y5I3 950 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 TCHHQ07283 1943 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 HOXA13P31271 388 aaPredicted RBP11.32□□□□□ -0.6
SSPN-202ENST00000422622 ADCY7P51828 1080 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 DYMQ7RTS9 669 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 NEDD1Q8NHV4 660 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 TBCKQ8TEA7 893 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 PPP1R9BQ96SB3 815 aa11.32□□□□□ -0.6
SSPN-202ENST00000422622 RGS17Q9UGC6 210 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms