RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 CCDC69A6NI79 296 aa10.84□□□□□ -0.67
PDGFC-202ENST00000422544 SPDYE16A6NNV3 312 aaPredicted RBP10.84□□□□□ -0.67
PDGFC-202ENST00000422544 ECM2O94769 699 aaPredicted RBP10.84□□□□□ -0.67
PDGFC-202ENST00000422544 BCRP11274 1271 aa10.84□□□□□ -0.67
PDGFC-202ENST00000422544 SLC16A2P36021 539 aa10.84□□□□□ -0.67
PDGFC-202ENST00000422544 LIFRP42702 1097 aa10.84□□□□□ -0.67
PDGFC-202ENST00000422544 GCLCP48506 637 aaPredicted RBP10.84□□□□□ -0.67
PDGFC-202ENST00000422544 CAP1Q01518 475 aa10.84□□□□□ -0.67
PDGFC-202ENST00000422544 ZNF543Q08ER8 600 aa10.84□□□□□ -0.67
PDGFC-202ENST00000422544 IKQ13123 557 aaPredicted RBP10.84□□□□□ -0.67
PDGFC-202ENST00000422544 HABP4Q5JVS0 413 aaKnown RBP10.84□□□□□ -0.67
PDGFC-202ENST00000422544 RAB11FIP4Q86YS3 637 aa10.84□□□□□ -0.67
PDGFC-202ENST00000422544 CHURC1Q8WUH1 139 aa10.84□□□□□ -0.67
PDGFC-202ENST00000422544 NUP133Q8WUM0 1156 aa10.84□□□□□ -0.67
PDGFC-202ENST00000422544 IL17RAQ96F46 866 aa10.84□□□□□ -0.67
PDGFC-202ENST00000422544 SLF1Q9BQI6 1058 aa10.84□□□□□ -0.67
PDGFC-202ENST00000422544 PAGR1Q9BTK6 254 aa10.84□□□□□ -0.67
PDGFC-202ENST00000422544 MYL10Q9BUA6 226 aa10.84□□□□□ -0.67
PDGFC-202ENST00000422544 UPF2Q9HAU5 1272 aaKnown RBP10.84□□□□□ -0.67
PDGFC-202ENST00000422544 TXNRD2Q9NNW7 524 aa10.84□□□□□ -0.67
PDGFC-202ENST00000422544 PDRG1Q9NUG6 133 aa10.84□□□□□ -0.67
PDGFC-202ENST00000422544 BRPF3Q9ULD4 1205 aa10.84□□□□□ -0.67
PDGFC-202ENST00000422544 PPP1R9AQ9ULJ8 1098 aa10.84□□□□□ -0.67
PDGFC-202ENST00000422544 SLC12A7Q9Y666 1083 aa10.84□□□□□ -0.67
PDGFC-202ENST00000422544 CNMDO75829 334 aa10.83□□□□□ -0.68
PDGFC-202ENST00000422544 PARP1P09874 1014 aaKnown RBP10.83□□□□□ -0.68
PDGFC-202ENST00000422544 RXRAP19793 462 aa10.83□□□□□ -0.68
PDGFC-202ENST00000422544 STAT2P52630 851 aa10.83□□□□□ -0.68
PDGFC-202ENST00000422544 SP3Q02447 781 aa10.83□□□□□ -0.68
PDGFC-202ENST00000422544 TROAPQ12815 778 aa10.83□□□□□ -0.68
PDGFC-202ENST00000422544 Q3C1V9 767 aa10.83□□□□□ -0.68
PDGFC-202ENST00000422544 FAM160B2Q86V87 743 aa10.83□□□□□ -0.68
PDGFC-202ENST00000422544 SGMS1Q86VZ5 419 aa10.83□□□□□ -0.68
PDGFC-202ENST00000422544 ZNF654Q8IZM8 581 aa10.83□□□□□ -0.68
PDGFC-202ENST00000422544 STAG2Q8N3U4 1231 aa10.83□□□□□ -0.68
PDGFC-202ENST00000422544 PRPF38AQ8NAV1 312 aaKnown RBP10.83□□□□□ -0.68
PDGFC-202ENST00000422544 GPRC5AQ8NFJ5 357 aa10.83□□□□□ -0.68
PDGFC-202ENST00000422544 ZNF296Q8WUU4 475 aaPredicted RBP10.83□□□□□ -0.68
PDGFC-202ENST00000422544 BRF1Q92994 677 aa10.83□□□□□ -0.68
PDGFC-202ENST00000422544 UBA5Q9GZZ9 404 aa10.83□□□□□ -0.68
PDGFC-202ENST00000422544 CPVLQ9H3G5 476 aa10.83□□□□□ -0.68
PDGFC-202ENST00000422544 BTBD7Q9P203 1132 aa10.83□□□□□ -0.68
PDGFC-202ENST00000422544 ADAMTS5Q9UNA0 930 aa10.83□□□□□ -0.68
PDGFC-202ENST00000422544 ZSWIM8A7E2V4 1837 aa10.83□□□□□ -0.68
PDGFC-202ENST00000422544 PTPRFP10586 1907 aa10.82□□□□□ -0.68
PDGFC-202ENST00000422544 LAMA2P24043 3122 aaKnown RBP10.82□□□□□ -0.68
PDGFC-202ENST00000422544 KLF18A0A0U1RQI7 1052 aa10.82□□□□□ -0.68
PDGFC-202ENST00000422544 VWA5AO00534 786 aa10.82□□□□□ -0.68
PDGFC-202ENST00000422544 PLA2G6O60733 806 aa10.82□□□□□ -0.68
PDGFC-202ENST00000422544 FKTNO75072 461 aa10.82□□□□□ -0.68
PDGFC-202ENST00000422544 DDAH1O94760 285 aa10.82□□□□□ -0.68
PDGFC-202ENST00000422544 RBM25P49756 843 aaKnown RBP10.82□□□□□ -0.68
PDGFC-202ENST00000422544 FXR1P51114 621 aaKnown RBP eCLIP10.82□□□□□ -0.68
PDGFC-202ENST00000422544 SNAP25P60880 206 aa10.82□□□□□ -0.68
PDGFC-202ENST00000422544 APOBRQ0VD83 1088 aa10.82□□□□□ -0.68
PDGFC-202ENST00000422544 GRM4Q14833 912 aa10.82□□□□□ -0.68
PDGFC-202ENST00000422544 FAM110CQ1W6H9 321 aa10.82□□□□□ -0.68
PDGFC-202ENST00000422544 ASPRV1Q53RT3 343 aa10.82□□□□□ -0.68
PDGFC-202ENST00000422544 GPATCH4Q5T3I0 446 aaKnown RBP10.82□□□□□ -0.68
PDGFC-202ENST00000422544 SYDE2Q5VT97 1194 aa10.82□□□□□ -0.68
PDGFC-202ENST00000422544 BTNL9Q6UXG8 535 aa10.82□□□□□ -0.68
PDGFC-202ENST00000422544 LBX2Q6XYB7 198 aa10.82□□□□□ -0.68
PDGFC-202ENST00000422544 SYNE3Q6ZMZ3 975 aa10.82□□□□□ -0.68
PDGFC-202ENST00000422544 CCDC144CPQ8IYA2 1237 aa10.82□□□□□ -0.68
PDGFC-202ENST00000422544 GTF3C2Q8WUA4 911 aaPredicted RBP10.82□□□□□ -0.68
PDGFC-202ENST00000422544 KIF2CQ99661 725 aa10.82□□□□□ -0.68
PDGFC-202ENST00000422544 LARP6Q9BRS8 491 aaKnown RBP10.82□□□□□ -0.68
PDGFC-202ENST00000422544 MORF4L1Q9UBU8 362 aa10.82□□□□□ -0.68
PDGFC-202ENST00000422544 MAD2L2Q9UI95 211 aa10.82□□□□□ -0.68
PDGFC-202ENST00000422544 PRR12Q9ULL5 1215 aa10.82□□□□□ -0.68
PDGFC-202ENST00000422544 NAP1L2Q9ULW6 460 aaPredicted RBP10.82□□□□□ -0.68
PDGFC-202ENST00000422544 RABGAP1Q9Y3P9 1069 aa10.82□□□□□ -0.68
PDGFC-202ENST00000422544 MYPNQ86TC9 1320 aa10.82□□□□□ -0.68
PDGFC-202ENST00000422544 LOC285556D6RIA3 1793 aa10.81□□□□□ -0.68
PDGFC-202ENST00000422544 POTEFA5A3E0 1075 aa10.81□□□□□ -0.68
PDGFC-202ENST00000422544 PALM3A6NDB9 673 aaPredicted RBP10.81□□□□□ -0.68
PDGFC-202ENST00000422544 KLRF2D3W0D1 207 aa10.81□□□□□ -0.68
PDGFC-202ENST00000422544 ZBED4O75132 1171 aa10.81□□□□□ -0.68
PDGFC-202ENST00000422544 NEK4P51957 841 aa10.81□□□□□ -0.68
PDGFC-202ENST00000422544 ERVK-9P63128 1117 aa10.81□□□□□ -0.68
PDGFC-202ENST00000422544 ERVK-24P63145 666 aa10.81□□□□□ -0.68
PDGFC-202ENST00000422544 LACTBP83111 547 aaPredicted RBP10.81□□□□□ -0.68
PDGFC-202ENST00000422544 TOB2Q14106 344 aaPredicted RBP10.81□□□□□ -0.68
PDGFC-202ENST00000422544 PLS1Q14651 629 aa10.81□□□□□ -0.68
PDGFC-202ENST00000422544 TMEM132BQ14DG7 1078 aa10.81□□□□□ -0.68
PDGFC-202ENST00000422544 NOM1Q5C9Z4 860 aaKnown RBP10.81□□□□□ -0.68
PDGFC-202ENST00000422544 APOA5Q6Q788 366 aa10.81□□□□□ -0.68
PDGFC-202ENST00000422544 MICU3Q86XE3 530 aa10.81□□□□□ -0.68
PDGFC-202ENST00000422544 CPXCR1Q8N123 301 aa10.81□□□□□ -0.68
PDGFC-202ENST00000422544 FBXL16Q8N461 479 aa10.81□□□□□ -0.68
PDGFC-202ENST00000422544 MB21D1Q8N884 522 aa10.81□□□□□ -0.68
PDGFC-202ENST00000422544 REPS2Q8NFH8 660 aa10.81□□□□□ -0.68
PDGFC-202ENST00000422544 CD99L2Q8TCZ2 262 aa10.81□□□□□ -0.68
PDGFC-202ENST00000422544 AGXT2Q9BYV1 514 aa10.81□□□□□ -0.68
PDGFC-202ENST00000422544 ARHGAP39Q9C0H5 1083 aa10.81□□□□□ -0.68
PDGFC-202ENST00000422544 SLC38A10Q9HBR0 1119 aa10.81□□□□□ -0.68
PDGFC-202ENST00000422544 RAVER2Q9HCJ3 691 aaKnown RBP10.81□□□□□ -0.68
PDGFC-202ENST00000422544 VAT1LQ9HCJ6 419 aa10.81□□□□□ -0.68
PDGFC-202ENST00000422544 CTDP1Q9Y5B0 961 aaPredicted RBP10.81□□□□□ -0.68
PDGFC-202ENST00000422544 ZBTB43O43298 467 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms