RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 INF2Q27J81 1249 aa10.95□□□□□ -0.66
CMSS1-201ENST00000421999 ASPRV1Q53RT3 343 aa10.95□□□□□ -0.66
CMSS1-201ENST00000421999 TMEM179Q6ZVK1 233 aa10.95□□□□□ -0.66
CMSS1-201ENST00000421999 SAMD7Q7Z3H4 446 aa10.95□□□□□ -0.66
CMSS1-201ENST00000421999 ILDR1Q86SU0 546 aaPredicted RBP10.95□□□□□ -0.66
CMSS1-201ENST00000421999 MCF2L2Q86YR7 1114 aa10.95□□□□□ -0.66
CMSS1-201ENST00000421999 CLEC10AQ8IUN9 316 aa10.95□□□□□ -0.66
CMSS1-201ENST00000421999 RIOK1Q9BRS2 568 aaKnown RBP10.95□□□□□ -0.66
CMSS1-201ENST00000421999 LMBRD1Q9NUN5 540 aa10.95□□□□□ -0.66
CMSS1-201ENST00000421999 GMPSP49915 693 aaPredicted RBP10.94□□□□□ -0.66
CMSS1-201ENST00000421999 PDE4DQ08499 809 aa10.94□□□□□ -0.66
CMSS1-201ENST00000421999 NR5A1Q13285 461 aa10.94□□□□□ -0.66
CMSS1-201ENST00000421999 RASA3Q14644 834 aa10.94□□□□□ -0.66
CMSS1-201ENST00000421999 CRY2Q49AN0 593 aa10.94□□□□□ -0.66
CMSS1-201ENST00000421999 DPH6Q7L8W6 267 aa10.94□□□□□ -0.66
CMSS1-201ENST00000421999 GPBP1L1Q9HC44 474 aaPredicted RBP10.94□□□□□ -0.66
CMSS1-201ENST00000421999 RIC1Q4ADV7 1423 aa10.94□□□□□ -0.66
CMSS1-201ENST00000421999 COL16A1Q07092 1604 aaPredicted RBP10.94□□□□□ -0.66
CMSS1-201ENST00000421999 CDC27P30260 824 aa10.94□□□□□ -0.66
CMSS1-201ENST00000421999 EEPD1Q7L9B9 569 aa10.94□□□□□ -0.66
CMSS1-201ENST00000421999 CCDC65Q8IXS2 484 aa10.94□□□□□ -0.66
CMSS1-201ENST00000421999 COA7Q96BR5 231 aa10.94□□□□□ -0.66
CMSS1-201ENST00000421999 IFT74Q96LB3 600 aa10.94□□□□□ -0.66
CMSS1-201ENST00000421999 IL1R1P14778 569 aa10.94□□□□□ -0.66
CMSS1-201ENST00000421999 SMTNP53814 917 aa10.94□□□□□ -0.66
CMSS1-201ENST00000421999 PRAMEF18Q5VWM3 479 aa10.94□□□□□ -0.66
CMSS1-201ENST00000421999 TPH2Q8IWU9 490 aa10.94□□□□□ -0.66
CMSS1-201ENST00000421999 RUFY1Q96T51 708 aa10.94□□□□□ -0.66
CMSS1-201ENST00000421999 TNNT1P13805 278 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 CETN2P41208 172 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 STAT2P52630 851 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 RASSF7Q02833 373 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 NFIAQ12857 509 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 LRSAM1Q6UWE0 723 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 OTUD5Q96G74 571 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 PRMT6Q96LA8 375 aaPredicted RBP10.93□□□□□ -0.66
CMSS1-201ENST00000421999 TRIM6Q9C030 488 aaPredicted RBP10.93□□□□□ -0.66
CMSS1-201ENST00000421999 FTOQ9C0B1 505 aaKnown RBP eCLIP10.93□□□□□ -0.66
CMSS1-201ENST00000421999 NHSL1Q5SYE7 1610 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 USP17L5A8MUK1 530 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 ORC4O43929 436 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 FAM160A1Q05DH4 1040 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 CXCL9Q07325 125 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 GPS2Q13227 327 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 APOBEC3FQ8IUX4 373 aaKnown RBP10.93□□□□□ -0.66
CMSS1-201ENST00000421999 POTEB2H3BUK9 544 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 NEMFO60524 1076 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 YEATS4O95619 227 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 EEF2P13639 858 aaKnown RBP10.93□□□□□ -0.66
CMSS1-201ENST00000421999 PPP4CP60510 307 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 SNAP25P60880 206 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 ANO6Q4KMQ2 910 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 NEDD1Q8NHV4 660 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 TAF4BQ92750 862 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 FERMT2Q96AC1 680 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 DNAJC25Q9H1X3 360 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 SENP2Q9HC62 589 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 PNMA2Q9UL42 364 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 KCNH3Q9ULD8 1083 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 DNM3Q9UQ16 869 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 TRPC6Q9Y210 931 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 POLR2DO15514 142 aaKnown RBP10.93□□□□□ -0.66
CMSS1-201ENST00000421999 DNM2P50570 870 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 ANTXR2P58335 489 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 SBK1Q52WX2 424 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 METTL13Q8N6R0 699 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 STAMQ92783 540 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 ZNF70Q9UC06 446 aaPredicted RBP10.93□□□□□ -0.66
CMSS1-201ENST00000421999 SERPINA10Q9UK55 444 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 MAPK8IP1Q9UQF2 711 aa10.93□□□□□ -0.66
CMSS1-201ENST00000421999 GRIK5Q16478 980 aa10.92□□□□□ -0.66
CMSS1-201ENST00000421999 HERC4Q5GLZ8 1057 aaPredicted RBP10.92□□□□□ -0.66
CMSS1-201ENST00000421999 RTEL1Q9NZ71 1219 aa10.92□□□□□ -0.66
CMSS1-201ENST00000421999 CLIC4Q9Y696 253 aa10.92□□□□□ -0.66
CMSS1-201ENST00000421999 TCRBV5S4A2TA0A5A2 114 aa10.92□□□□□ -0.66
CMSS1-201ENST00000421999 M0QZ92 97 aa10.92□□□□□ -0.66
CMSS1-201ENST00000421999 CEP135Q66GS9 1140 aa10.92□□□□□ -0.66
CMSS1-201ENST00000421999 TMTC3Q6ZXV5 915 aa10.92□□□□□ -0.66
CMSS1-201ENST00000421999 DYMQ7RTS9 669 aa10.92□□□□□ -0.66
CMSS1-201ENST00000421999 MIER3Q7Z3K6 550 aa10.92□□□□□ -0.66
CMSS1-201ENST00000421999 TMC6Q7Z403 805 aa10.92□□□□□ -0.66
CMSS1-201ENST00000421999 IGDCC4Q8TDY8 1250 aa10.92□□□□□ -0.66
CMSS1-201ENST00000421999 ZHX1Q9UKY1 873 aaPredicted RBP10.92□□□□□ -0.66
CMSS1-201ENST00000421999 UTP14CQ5TAP6 766 aaKnown RBP10.92□□□□□ -0.66
CMSS1-201ENST00000421999 SGMS1Q86VZ5 419 aa10.92□□□□□ -0.66
CMSS1-201ENST00000421999 PLA2G4DQ86XP0 818 aa10.92□□□□□ -0.66
CMSS1-201ENST00000421999 SYNCQ9H7C4 482 aa10.92□□□□□ -0.66
CMSS1-201ENST00000421999 PCDHA12Q9UN75 941 aa10.92□□□□□ -0.66
CMSS1-201ENST00000421999 MRVI1Q9Y6F6 885 aa10.92□□□□□ -0.66
CMSS1-201ENST00000421999 CACNA1FO60840 1977 aa10.92□□□□□ -0.66
CMSS1-201ENST00000421999 TRAF5O00463 557 aa10.91□□□□□ -0.66
CMSS1-201ENST00000421999 PRPF3O43395 683 aaKnown RBP10.91□□□□□ -0.66
CMSS1-201ENST00000421999 KIF23Q02241 960 aaPredicted RBP10.91□□□□□ -0.66
CMSS1-201ENST00000421999 SPAG1Q07617 926 aa10.91□□□□□ -0.66
CMSS1-201ENST00000421999 BIRC3Q13489 604 aa10.91□□□□□ -0.66
CMSS1-201ENST00000421999 ERCC4Q92889 916 aaPredicted RBP10.91□□□□□ -0.66
CMSS1-201ENST00000421999 PGBD1Q96JS3 809 aa10.91□□□□□ -0.66
CMSS1-201ENST00000421999 RTFDC1Q9BY42 306 aaPredicted RBP10.91□□□□□ -0.66
CMSS1-201ENST00000421999 TMEM39BQ9GZU3 492 aa10.91□□□□□ -0.66
CMSS1-201ENST00000421999 SUGCTQ9HAC7 445 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms