RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 JAKMIP1Q96N16 626 aaKnown RBP18.43■□□□□ 0.54
BRAT1-202ENST00000421712 MOV10L1Q9BXT6 1211 aaKnown RBP18.43■□□□□ 0.54
BRAT1-202ENST00000421712 LRRC2Q9BYS8 371 aa18.43■□□□□ 0.54
BRAT1-202ENST00000421712 SNX14Q9Y5W7 946 aa18.43■□□□□ 0.54
BRAT1-202ENST00000421712 ZSWIM8A7E2V4 1837 aa18.42■□□□□ 0.54
BRAT1-202ENST00000421712 MGAMO43451 1857 aa18.42■□□□□ 0.54
BRAT1-202ENST00000421712 CCDC69A6NI79 296 aa18.42■□□□□ 0.54
BRAT1-202ENST00000421712 PLA2G6O60733 806 aa18.42■□□□□ 0.54
BRAT1-202ENST00000421712 HMGB1P09429 215 aaKnown RBP18.42■□□□□ 0.54
BRAT1-202ENST00000421712 STAT3P40763 770 aa18.42■□□□□ 0.54
BRAT1-202ENST00000421712 PRMT2P55345 433 aa18.42■□□□□ 0.54
BRAT1-202ENST00000421712 FGD1P98174 961 aa18.42■□□□□ 0.54
BRAT1-202ENST00000421712 PRKCZQ05513 592 aa18.42■□□□□ 0.54
BRAT1-202ENST00000421712 ZNF543Q08ER8 600 aa18.42■□□□□ 0.54
BRAT1-202ENST00000421712 GPATCH4Q5T3I0 446 aaKnown RBP18.42■□□□□ 0.54
BRAT1-202ENST00000421712 DHX32Q7L7V1 743 aaKnown RBP18.42■□□□□ 0.54
BRAT1-202ENST00000421712 PLEKHH3Q7Z736 793 aa18.42■□□□□ 0.54
BRAT1-202ENST00000421712 TMTC2Q8N394 836 aa18.42■□□□□ 0.54
BRAT1-202ENST00000421712 SENP2Q9HC62 589 aa18.42■□□□□ 0.54
BRAT1-202ENST00000421712 RAVER2Q9HCJ3 691 aaKnown RBP18.42■□□□□ 0.54
BRAT1-202ENST00000421712 PRR12Q9ULL5 1215 aa18.42■□□□□ 0.54
BRAT1-202ENST00000421712 GABRQQ9UN88 632 aa18.42■□□□□ 0.54
BRAT1-202ENST00000421712 IVNS1ABPQ9Y6Y0 642 aa18.42■□□□□ 0.54
BRAT1-202ENST00000421712 RLFQ13129 1914 aa18.42■□□□□ 0.54
BRAT1-202ENST00000421712 FDX1P10109 184 aa18.41■□□□□ 0.54
BRAT1-202ENST00000421712 ERCC3P19447 782 aa18.41■□□□□ 0.54
BRAT1-202ENST00000421712 PSMA5P28066 241 aa18.41■□□□□ 0.54
BRAT1-202ENST00000421712 FLT3LGP49771 235 aa18.41■□□□□ 0.54
BRAT1-202ENST00000421712 SNAP25P60880 206 aa18.41■□□□□ 0.54
BRAT1-202ENST00000421712 ASPRV1Q53RT3 343 aa18.41■□□□□ 0.54
BRAT1-202ENST00000421712 SYDE2Q5VT97 1194 aa18.41■□□□□ 0.54
BRAT1-202ENST00000421712 CCDC174Q6PII3 467 aa18.41■□□□□ 0.54
BRAT1-202ENST00000421712 BLOC1S2Q6QNY1 142 aa18.41■□□□□ 0.54
BRAT1-202ENST00000421712 GPR142Q7Z601 462 aa18.41■□□□□ 0.54
BRAT1-202ENST00000421712 NUP133Q8WUM0 1156 aa18.41■□□□□ 0.54
BRAT1-202ENST00000421712 KCNB2Q92953 911 aa18.41■□□□□ 0.54
BRAT1-202ENST00000421712 TCEANC2Q96MN5 208 aa18.41■□□□□ 0.54
BRAT1-202ENST00000421712 NUDT12Q9BQG2 462 aa18.41■□□□□ 0.54
BRAT1-202ENST00000421712 MTA3Q9BTC8 594 aa18.41■□□□□ 0.54
BRAT1-202ENST00000421712 LY9Q9HBG7 655 aa18.41■□□□□ 0.54
BRAT1-202ENST00000421712 SLC38A10Q9HBR0 1119 aa18.41■□□□□ 0.54
BRAT1-202ENST00000421712 GPHNQ9NQX3 736 aaPredicted RBP18.41■□□□□ 0.54
BRAT1-202ENST00000421712 PTCH2Q9Y6C5 1203 aa18.41■□□□□ 0.54
BRAT1-202ENST00000421712 SH2B2O14492 632 aaPredicted RBP18.4■□□□□ 0.54
BRAT1-202ENST00000421712 DHX16O60231 1041 aaKnown RBP18.4■□□□□ 0.54
BRAT1-202ENST00000421712 SLC25A27O95847 323 aa18.4■□□□□ 0.54
BRAT1-202ENST00000421712 SNHG28P0DPA3 235 aa18.4■□□□□ 0.54
BRAT1-202ENST00000421712 COL9A3Q14050 684 aaPredicted RBP18.4■□□□□ 0.54
BRAT1-202ENST00000421712 SNRNP48Q6IEG0 339 aaKnown RBP18.4■□□□□ 0.54
BRAT1-202ENST00000421712 TEX13BQ9BXU2 312 aa18.4■□□□□ 0.54
BRAT1-202ENST00000421712 UBA5Q9GZZ9 404 aa18.4■□□□□ 0.54
BRAT1-202ENST00000421712 MROH8Q9H579 483 aa18.4■□□□□ 0.54
BRAT1-202ENST00000421712 DOCK3Q8IZD9 2030 aa18.4■□□□□ 0.54
BRAT1-202ENST00000421712 PARP14Q460N5 1801 aa18.39■□□□□ 0.54
BRAT1-202ENST00000421712 CPA1P15085 419 aa18.39■□□□□ 0.53
BRAT1-202ENST00000421712 CASTP20810 708 aaKnown RBP18.39■□□□□ 0.53
BRAT1-202ENST00000421712 BTNL9Q6UXG8 535 aa18.39■□□□□ 0.53
BRAT1-202ENST00000421712 SYNE3Q6ZMZ3 975 aa18.39■□□□□ 0.53
BRAT1-202ENST00000421712 RIOX2Q8IUF8 465 aa18.39■□□□□ 0.53
BRAT1-202ENST00000421712 SHCBP1Q8NEM2 672 aa18.39■□□□□ 0.53
BRAT1-202ENST00000421712 REPS2Q8NFH8 660 aa18.39■□□□□ 0.53
BRAT1-202ENST00000421712 VAT1LQ9HCJ6 419 aa18.39■□□□□ 0.53
BRAT1-202ENST00000421712 BIN2Q9UBW5 565 aaPredicted RBP18.39■□□□□ 0.53
BRAT1-202ENST00000421712 ZNF214Q9UL59 606 aaPredicted RBP18.39■□□□□ 0.53
BRAT1-202ENST00000421712 HPS5Q9UPZ3 1129 aa18.39■□□□□ 0.53
BRAT1-202ENST00000421712 COL11A1P12107 1806 aaPredicted RBP18.39■□□□□ 0.53
BRAT1-202ENST00000421712 CYP2B6P20813 491 aa18.38■□□□□ 0.53
BRAT1-202ENST00000421712 COPB2P35606 906 aa18.38■□□□□ 0.53
BRAT1-202ENST00000421712 LIFRP42702 1097 aa18.38■□□□□ 0.53
BRAT1-202ENST00000421712 OAZ1P54368 228 aa18.38■□□□□ 0.53
BRAT1-202ENST00000421712 SLC9C1Q4G0N8 1177 aa18.38■□□□□ 0.53
BRAT1-202ENST00000421712 NBPF11Q86T75 865 aa18.38■□□□□ 0.53
BRAT1-202ENST00000421712 ZNF654Q8IZM8 581 aa18.38■□□□□ 0.53
BRAT1-202ENST00000421712 SOCS4Q8WXH5 440 aa18.38■□□□□ 0.53
BRAT1-202ENST00000421712 ABHD8Q96I13 439 aa18.38■□□□□ 0.53
BRAT1-202ENST00000421712 CPVLQ9H3G5 476 aa18.38■□□□□ 0.53
BRAT1-202ENST00000421712 HOMER2Q9NSB8 354 aa18.38■□□□□ 0.53
BRAT1-202ENST00000421712 NAP1L2Q9ULW6 460 aaPredicted RBP18.38■□□□□ 0.53
BRAT1-202ENST00000421712 SLC12A7Q9Y666 1083 aa18.38■□□□□ 0.53
BRAT1-202ENST00000421712 KLRF2D3W0D1 207 aa18.37■□□□□ 0.53
BRAT1-202ENST00000421712 SEC24BO95487 1268 aa18.37■□□□□ 0.53
BRAT1-202ENST00000421712 FCER1AP12319 257 aa18.37■□□□□ 0.53
BRAT1-202ENST00000421712 PTPREP23469 700 aa18.37■□□□□ 0.53
BRAT1-202ENST00000421712 EXOSC10Q01780 885 aaKnown RBP18.37■□□□□ 0.53
BRAT1-202ENST00000421712 STAG2Q8N3U4 1231 aa18.37■□□□□ 0.53
BRAT1-202ENST00000421712 CTCFLQ8NI51 663 aaPredicted RBP18.37■□□□□ 0.53
BRAT1-202ENST00000421712 AGBL1Q96MI9 1066 aa18.37■□□□□ 0.53
BRAT1-202ENST00000421712 MMP19Q99542 508 aa18.37■□□□□ 0.53
BRAT1-202ENST00000421712 MYL10Q9BUA6 226 aa18.37■□□□□ 0.53
BRAT1-202ENST00000421712 GJD2Q9UKL4 321 aa18.37■□□□□ 0.53
BRAT1-202ENST00000421712 WDR19Q8NEZ3 1342 aa18.37■□□□□ 0.53
BRAT1-202ENST00000421712 SLC15A5A6NIM6 579 aa18.36■□□□□ 0.53
BRAT1-202ENST00000421712 ATP2A1O14983 1001 aa18.36■□□□□ 0.53
BRAT1-202ENST00000421712 STRNO43815 780 aa18.36■□□□□ 0.53
BRAT1-202ENST00000421712 ADCY3O60266 1144 aa18.36■□□□□ 0.53
BRAT1-202ENST00000421712 ALAS1P13196 640 aa18.36■□□□□ 0.53
BRAT1-202ENST00000421712 RGS2P41220 211 aa18.36■□□□□ 0.53
BRAT1-202ENST00000421712 GRM4Q14833 912 aa18.36■□□□□ 0.53
BRAT1-202ENST00000421712 C8orf34Q49A92 452 aa18.36■□□□□ 0.53
BRAT1-202ENST00000421712 DPP9Q86TI2 863 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms