RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 SPDYE16A6NNV3 312 aaPredicted RBP20.42■□□□□ 0.86
LINC00271-201ENST00000421378 SLC16A2P36021 539 aa20.42■□□□□ 0.86
LINC00271-201ENST00000421378 HERVK_113P62684 666 aa20.42■□□□□ 0.86
LINC00271-201ENST00000421378 PPP2R5BQ15173 497 aa20.42■□□□□ 0.86
LINC00271-201ENST00000421378 BTNL9Q6UXG8 535 aa20.42■□□□□ 0.86
LINC00271-201ENST00000421378 P2RX7Q99572 595 aaKnown RBP20.42■□□□□ 0.86
LINC00271-201ENST00000421378 LIMCH1Q9UPQ0 1083 aa20.42■□□□□ 0.86
LINC00271-201ENST00000421378 CCDC196A0A1B0GTZ2 297 aa20.41■□□□□ 0.86
LINC00271-201ENST00000421378 CD2BP2O95400 341 aaKnown RBP20.41■□□□□ 0.86
LINC00271-201ENST00000421378 DSG3P32926 999 aa20.41■□□□□ 0.86
LINC00271-201ENST00000421378 GNAQP50148 359 aa20.41■□□□□ 0.86
LINC00271-201ENST00000421378 MAP2K1Q02750 393 aaPredicted RBP20.41■□□□□ 0.86
LINC00271-201ENST00000421378 STK3Q13188 491 aa20.41■□□□□ 0.86
LINC00271-201ENST00000421378 UBA5Q9GZZ9 404 aa20.41■□□□□ 0.86
LINC00271-201ENST00000421378 CPVLQ9H3G5 476 aa20.41■□□□□ 0.86
LINC00271-201ENST00000421378 MCM2P49736 904 aa20.4■□□□□ 0.86
LINC00271-201ENST00000421378 CCT2P78371 535 aaKnown RBP20.4■□□□□ 0.86
LINC00271-201ENST00000421378 ME3Q16798 604 aa20.4■□□□□ 0.86
LINC00271-201ENST00000421378 SYDE2Q5VT97 1194 aa20.4■□□□□ 0.86
LINC00271-201ENST00000421378 LBX2Q6XYB7 198 aa20.4■□□□□ 0.86
LINC00271-201ENST00000421378 ATG4CQ96DT6 458 aa20.4■□□□□ 0.86
LINC00271-201ENST00000421378 LZTS2Q9BRK4 669 aa20.4■□□□□ 0.86
LINC00271-201ENST00000421378 SLKQ9H2G2 1235 aaPredicted RBP20.4■□□□□ 0.86
LINC00271-201ENST00000421378 ZFYVE28Q9HCC9 887 aa20.4■□□□□ 0.86
LINC00271-201ENST00000421378 PRR12Q9ULL5 1215 aa20.4■□□□□ 0.86
LINC00271-201ENST00000421378 CA12O43570 354 aa20.39■□□□□ 0.85
LINC00271-201ENST00000421378 DHX16O60231 1041 aaKnown RBP20.39■□□□□ 0.85
LINC00271-201ENST00000421378 PLEKHA8P1O95397 391 aa20.39■□□□□ 0.85
LINC00271-201ENST00000421378 CDC27P30260 824 aa20.39■□□□□ 0.85
LINC00271-201ENST00000421378 CRHR2Q13324 411 aa20.39■□□□□ 0.85
LINC00271-201ENST00000421378 TMTC3Q6ZXV5 915 aa20.39■□□□□ 0.85
LINC00271-201ENST00000421378 GTF3C2Q8WUA4 911 aaPredicted RBP20.39■□□□□ 0.85
LINC00271-201ENST00000421378 NCOA5Q9HCD5 579 aaKnown RBP20.39■□□□□ 0.85
LINC00271-201ENST00000421378 FAM217BQ9NTX9 383 aaPredicted RBP20.39■□□□□ 0.85
LINC00271-201ENST00000421378 A0A0G2JMZ2 1700 aa20.39■□□□□ 0.85
LINC00271-201ENST00000421378 VWA5AO00534 786 aa20.38■□□□□ 0.85
LINC00271-201ENST00000421378 PFKFB2O60825 505 aa20.38■□□□□ 0.85
LINC00271-201ENST00000421378 LARGE1O95461 756 aa20.38■□□□□ 0.85
LINC00271-201ENST00000421378 CMTR1Q8N1G2 835 aaKnown RBP20.38■□□□□ 0.85
LINC00271-201ENST00000421378 BEGAINQ9BUH8 593 aa20.38■□□□□ 0.85
LINC00271-201ENST00000421378 RNF186Q9NXI6 227 aa20.38■□□□□ 0.85
LINC00271-201ENST00000421378 ADAMTS5Q9UNA0 930 aa20.38■□□□□ 0.85
LINC00271-201ENST00000421378 TLR2O60603 784 aa20.38■□□□□ 0.85
LINC00271-201ENST00000421378 TRPA1O75762 1119 aa20.38■□□□□ 0.85
LINC00271-201ENST00000421378 ADD1P35611 737 aaKnown RBP20.38■□□□□ 0.85
LINC00271-201ENST00000421378 GCLCP48506 637 aaPredicted RBP20.38■□□□□ 0.85
LINC00271-201ENST00000421378 SCRN1Q12765 414 aa20.38■□□□□ 0.85
LINC00271-201ENST00000421378 NBPF11Q86T75 865 aa20.38■□□□□ 0.85
LINC00271-201ENST00000421378 ADGRF4Q8IZF3 695 aa20.38■□□□□ 0.85
LINC00271-201ENST00000421378 MB21D1Q8N884 522 aa20.38■□□□□ 0.85
LINC00271-201ENST00000421378 ZSCAN31Q96LW9 406 aaPredicted RBP20.38■□□□□ 0.85
LINC00271-201ENST00000421378 SPZ1Q9BXG8 430 aa20.38■□□□□ 0.85
LINC00271-201ENST00000421378 SH2B1Q9NRF2 756 aaPredicted RBP20.38■□□□□ 0.85
LINC00271-201ENST00000421378 ADGRA2Q96PE1 1338 aa20.37■□□□□ 0.85
LINC00271-201ENST00000421378 CPLX1O14810 134 aa20.37■□□□□ 0.85
LINC00271-201ENST00000421378 CYTH3O43739 400 aa20.37■□□□□ 0.85
LINC00271-201ENST00000421378 FDX1P10109 184 aa20.37■□□□□ 0.85
LINC00271-201ENST00000421378 SMARCA1P28370 1054 aa20.37■□□□□ 0.85
LINC00271-201ENST00000421378 CCDC82Q8N4S0 544 aa20.37■□□□□ 0.85
LINC00271-201ENST00000421378 SRBD1Q8N5C6 995 aaKnown RBP20.37■□□□□ 0.85
LINC00271-201ENST00000421378 GTF3C6Q969F1 213 aa20.37■□□□□ 0.85
LINC00271-201ENST00000421378 CFHR5Q9BXR6 569 aa20.37■□□□□ 0.85
LINC00271-201ENST00000421378 SLC38A10Q9HBR0 1119 aa20.37■□□□□ 0.85
LINC00271-201ENST00000421378 SAGE1Q9NXZ1 904 aa20.37■□□□□ 0.85
LINC00271-201ENST00000421378 CTDP1Q9Y5B0 961 aaPredicted RBP20.37■□□□□ 0.85
LINC00271-201ENST00000421378 COL11A1P12107 1806 aaPredicted RBP20.36■□□□□ 0.85
LINC00271-201ENST00000421378 SLC35G1Q2M3R5 365 aa20.36■□□□□ 0.85
LINC00271-201ENST00000421378 POTEEQ6S8J3 1075 aa20.36■□□□□ 0.85
LINC00271-201ENST00000421378 NECAB1Q8N987 351 aa20.36■□□□□ 0.85
LINC00271-201ENST00000421378 PAGR1Q9BTK6 254 aa20.36■□□□□ 0.85
LINC00271-201ENST00000421378 RANBP17Q9H2T7 1088 aaKnown RBP20.36■□□□□ 0.85
LINC00271-201ENST00000421378 RIOX1Q9H6W3 641 aa20.36■□□□□ 0.85
LINC00271-201ENST00000421378 JMJD4Q9H9V9 463 aa20.36■□□□□ 0.85
LINC00271-201ENST00000421378 VAT1LQ9HCJ6 419 aa20.36■□□□□ 0.85
LINC00271-201ENST00000421378 ZBED4O75132 1171 aa20.35■□□□□ 0.85
LINC00271-201ENST00000421378 CPLX2Q6PUV4 134 aaKnown RBP20.35■□□□□ 0.85
LINC00271-201ENST00000421378 ANKRD13CQ8N6S4 541 aa20.35■□□□□ 0.85
LINC00271-201ENST00000421378 TXNRD2Q9NNW7 524 aa20.35■□□□□ 0.85
LINC00271-201ENST00000421378 RBPJLQ9UBG7 517 aa20.35■□□□□ 0.85
LINC00271-201ENST00000421378 RABGAP1Q9Y3P9 1069 aa20.35■□□□□ 0.85
LINC00271-201ENST00000421378 CNTNAP5Q8WYK1 1306 aa20.35■□□□□ 0.85
LINC00271-201ENST00000421378 TBC1D8O95759 1140 aa20.34■□□□□ 0.85
LINC00271-201ENST00000421378 SNAP25P60880 206 aa20.34■□□□□ 0.85
LINC00271-201ENST00000421378 CDC37Q16543 378 aaPredicted RBP20.34■□□□□ 0.85
LINC00271-201ENST00000421378 FAM110CQ1W6H9 321 aa20.34■□□□□ 0.85
LINC00271-201ENST00000421378 HOMER1Q86YM7 354 aa20.34■□□□□ 0.85
LINC00271-201ENST00000421378 JMYQ8N9B5 988 aa20.34■□□□□ 0.85
LINC00271-201ENST00000421378 REPS2Q8NFH8 660 aa20.34■□□□□ 0.85
LINC00271-201ENST00000421378 TMX3Q96JJ7 454 aa20.34■□□□□ 0.85
LINC00271-201ENST00000421378 WBP1LQ9NX94 342 aa20.34■□□□□ 0.85
LINC00271-201ENST00000421378 CPA4Q9UI42 421 aa20.34■□□□□ 0.85
LINC00271-201ENST00000421378 FUT2Q10981 343 aa20.34■□□□□ 0.85
LINC00271-201ENST00000421378 TMEM132BQ14DG7 1078 aa20.34■□□□□ 0.85
LINC00271-201ENST00000421378 NTRK3Q16288 839 aa20.34■□□□□ 0.85
LINC00271-201ENST00000421378 SNX21Q969T3 373 aa20.34■□□□□ 0.85
LINC00271-201ENST00000421378 MTMR8Q96EF0 704 aa20.34■□□□□ 0.85
LINC00271-201ENST00000421378 RRP36Q96EU6 259 aaKnown RBP20.34■□□□□ 0.85
LINC00271-201ENST00000421378 BTBD7Q9P203 1132 aa20.34■□□□□ 0.85
LINC00271-201ENST00000421378 SEC63Q9UGP8 760 aaKnown RBP20.34■□□□□ 0.85
LINC00271-201ENST00000421378 ZNF214Q9UL59 606 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms