RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 TGFBRAP1Q8WUH2 860 aa11.1□□□□□ -0.63
TRIM39-206ENST00000420746 IRF2BPLQ9H1B7 796 aa11.1□□□□□ -0.63
TRIM39-206ENST00000420746 EHD4Q9H223 541 aa11.1□□□□□ -0.63
TRIM39-206ENST00000420746 PALD1Q9ULE6 856 aa11.1□□□□□ -0.63
TRIM39-206ENST00000420746 FAM50BQ9Y247 325 aa11.1□□□□□ -0.63
TRIM39-206ENST00000420746 DCHS1Q96JQ0 3298 aa11.1□□□□□ -0.63
TRIM39-206ENST00000420746 ZP2Q05996 745 aa11.09□□□□□ -0.63
TRIM39-206ENST00000420746 PLS1Q14651 629 aa11.09□□□□□ -0.63
TRIM39-206ENST00000420746 TTLL4Q14679 1199 aa11.09□□□□□ -0.63
TRIM39-206ENST00000420746 KCTD2Q14681 263 aa11.09□□□□□ -0.63
TRIM39-206ENST00000420746 ABCB5Q2M3G0 1257 aa11.09□□□□□ -0.63
TRIM39-206ENST00000420746 NEK9Q8TD19 979 aa11.09□□□□□ -0.63
TRIM39-206ENST00000420746 CDCA7LQ96GN5 454 aa11.09□□□□□ -0.63
TRIM39-206ENST00000420746 TANGO6Q9C0B7 1094 aa11.09□□□□□ -0.63
TRIM39-206ENST00000420746 SIL1Q9H173 461 aa11.09□□□□□ -0.63
TRIM39-206ENST00000420746 CABP5Q9NP86 173 aa11.09□□□□□ -0.63
TRIM39-206ENST00000420746 AATFQ9NY61 560 aaKnown RBP eCLIP11.09□□□□□ -0.63
TRIM39-206ENST00000420746 RAI14Q9P0K7 980 aa11.09□□□□□ -0.63
TRIM39-206ENST00000420746 HMG20BQ9P0W2 317 aa11.09□□□□□ -0.63
TRIM39-206ENST00000420746 ZFHX2Q9C0A1 2572 aaPredicted RBP11.09□□□□□ -0.63
TRIM39-206ENST00000420746 COL4A4P53420 1690 aaPredicted RBP11.08□□□□□ -0.64
TRIM39-206ENST00000420746 ARHGEF15O94989 841 aa11.08□□□□□ -0.64
TRIM39-206ENST00000420746 SNAI1O95863 264 aaPredicted RBP11.08□□□□□ -0.64
TRIM39-206ENST00000420746 PGK2P07205 417 aa11.08□□□□□ -0.64
TRIM39-206ENST00000420746 EXOSC9Q06265 439 aaKnown RBP11.08□□□□□ -0.64
TRIM39-206ENST00000420746 TCF15Q12870 199 aa11.08□□□□□ -0.64
TRIM39-206ENST00000420746 CERKLQ49MI3 558 aaPredicted RBP11.08□□□□□ -0.64
TRIM39-206ENST00000420746 HERC4Q5GLZ8 1057 aaPredicted RBP11.08□□□□□ -0.64
TRIM39-206ENST00000420746 GNASQ5JWF2 1037 aa11.08□□□□□ -0.64
TRIM39-206ENST00000420746 RIOX2Q8IUF8 465 aa11.08□□□□□ -0.64
TRIM39-206ENST00000420746 HERC6Q8IVU3 1022 aa11.08□□□□□ -0.64
TRIM39-206ENST00000420746 SPATA5Q8NB90 893 aa11.08□□□□□ -0.64
TRIM39-206ENST00000420746 ANKS1AQ92625 1134 aa11.08□□□□□ -0.64
TRIM39-206ENST00000420746 AGBL1Q96MI9 1066 aa11.08□□□□□ -0.64
TRIM39-206ENST00000420746 USP44Q9H0E7 712 aa11.08□□□□□ -0.64
TRIM39-206ENST00000420746 SERPINB13Q9UIV8 391 aa11.08□□□□□ -0.64
TRIM39-206ENST00000420746 FOCADQ5VW36 1801 aa11.07□□□□□ -0.64
TRIM39-206ENST00000420746 A0A1B0GUL7 405 aa11.07□□□□□ -0.64
TRIM39-206ENST00000420746 PROB1E7EW31 1015 aa11.07□□□□□ -0.64
TRIM39-206ENST00000420746 RFC2P35250 354 aa11.07□□□□□ -0.64
TRIM39-206ENST00000420746 TMEM132BQ14DG7 1078 aa11.07□□□□□ -0.64
TRIM39-206ENST00000420746 ZNF467Q7Z7K2 595 aaPredicted RBP11.07□□□□□ -0.64
TRIM39-206ENST00000420746 POTEDQ86YR6 584 aa11.07□□□□□ -0.64
TRIM39-206ENST00000420746 ADHFE1Q8IWW8 467 aa11.07□□□□□ -0.64
TRIM39-206ENST00000420746 MAGEB6Q8N7X4 407 aa11.07□□□□□ -0.64
TRIM39-206ENST00000420746 ATG4CQ96DT6 458 aa11.07□□□□□ -0.64
TRIM39-206ENST00000420746 XAGE2Q96GT9 111 aa11.07□□□□□ -0.64
TRIM39-206ENST00000420746 ZHX1Q9UKY1 873 aaPredicted RBP11.07□□□□□ -0.64
TRIM39-206ENST00000420746 ADAMTS5Q9UNA0 930 aa11.07□□□□□ -0.64
TRIM39-206ENST00000420746 AKAP2Q9Y2D5 859 aa11.07□□□□□ -0.64
TRIM39-206ENST00000420746 CTAGE5O15320 804 aa11.06□□□□□ -0.64
TRIM39-206ENST00000420746 B4GALT4O60513 344 aa11.06□□□□□ -0.64
TRIM39-206ENST00000420746 FLOT1O75955 427 aa11.06□□□□□ -0.64
TRIM39-206ENST00000420746 ARID4AP29374 1257 aaPredicted RBP11.06□□□□□ -0.64
TRIM39-206ENST00000420746 GUCY1A2P33402 732 aa11.06□□□□□ -0.64
TRIM39-206ENST00000420746 TIMM10P62072 90 aa11.06□□□□□ -0.64
TRIM39-206ENST00000420746 ITGA7Q13683 1181 aa11.06□□□□□ -0.64
TRIM39-206ENST00000420746 ACVR2BQ13705 512 aa11.06□□□□□ -0.64
TRIM39-206ENST00000420746 IER5LQ5T953 404 aa11.06□□□□□ -0.64
TRIM39-206ENST00000420746 NAA16Q6N069 864 aaPredicted RBP11.06□□□□□ -0.64
TRIM39-206ENST00000420746 TBC1D9Q6ZT07 1266 aa11.06□□□□□ -0.64
TRIM39-206ENST00000420746 CERS3Q8IU89 383 aa11.06□□□□□ -0.64
TRIM39-206ENST00000420746 GDPD5Q8WTR4 605 aa11.06□□□□□ -0.64
TRIM39-206ENST00000420746 SCLYQ96I15 445 aa11.06□□□□□ -0.64
TRIM39-206ENST00000420746 ABHD16BQ9H3Z7 469 aa11.06□□□□□ -0.64
TRIM39-206ENST00000420746 LRP2BPQ9P2M1 347 aa11.06□□□□□ -0.64
TRIM39-206ENST00000420746 TNKSO95271 1327 aa11.06□□□□□ -0.64
TRIM39-206ENST00000420746 A0A1W2PRG0 241 aa11.05□□□□□ -0.64
TRIM39-206ENST00000420746 ADCY6O43306 1168 aa11.05□□□□□ -0.64
TRIM39-206ENST00000420746 RGS20O76081 388 aa11.05□□□□□ -0.64
TRIM39-206ENST00000420746 BAIAP3O94812 1187 aa11.05□□□□□ -0.64
TRIM39-206ENST00000420746 IRX5P78411 483 aaPredicted RBP11.05□□□□□ -0.64
TRIM39-206ENST00000420746 PI16Q6UXB8 463 aa11.05□□□□□ -0.64
TRIM39-206ENST00000420746 EDAQ92838 391 aa11.05□□□□□ -0.64
TRIM39-206ENST00000420746 POP1Q99575 1024 aaKnown RBP11.05□□□□□ -0.64
TRIM39-206ENST00000420746 COPRSQ9NQ92 184 aa11.05□□□□□ -0.64
TRIM39-206ENST00000420746 SAP30BPQ9UHR5 308 aaKnown RBP11.05□□□□□ -0.64
TRIM39-206ENST00000420746 CACNA1HO95180 2353 aa11.04□□□□□ -0.64
TRIM39-206ENST00000420746 DNAJC25-GNG10A0A024R161 153 aa11.04□□□□□ -0.64
TRIM39-206ENST00000420746 SUPT20HL2P0C7V6 817 aa11.04□□□□□ -0.64
TRIM39-206ENST00000420746 IRS1P35568 1242 aa11.04□□□□□ -0.64
TRIM39-206ENST00000420746 ERVK-21P61565 698 aa11.04□□□□□ -0.64
TRIM39-206ENST00000420746 CCDC144BQ3MJ40 725 aa11.04□□□□□ -0.64
TRIM39-206ENST00000420746 TTC6Q86TZ1 520 aa11.04□□□□□ -0.64
TRIM39-206ENST00000420746 WDR63Q8IWG1 891 aa11.04□□□□□ -0.64
TRIM39-206ENST00000420746 SUGP1Q8IWZ8 645 aaKnown RBP11.04□□□□□ -0.64
TRIM39-206ENST00000420746 TRPV6Q9H1D0 765 aa11.04□□□□□ -0.64
TRIM39-206ENST00000420746 SUGCTQ9HAC7 445 aa11.04□□□□□ -0.64
TRIM39-206ENST00000420746 ALG13Q9NP73 1137 aaKnown RBP11.04□□□□□ -0.64
TRIM39-206ENST00000420746 GRIN2DO15399 1336 aa11.04□□□□□ -0.64
TRIM39-206ENST00000420746 PTPRCP08575 1304 aa11.04□□□□□ -0.64
TRIM39-206ENST00000420746 ZNFX1Q9P2E3 1918 aaKnown RBP11.03□□□□□ -0.64
TRIM39-206ENST00000420746 CACNA1BQ00975 2339 aa11.03□□□□□ -0.64
TRIM39-206ENST00000420746 WDR46O15213 610 aaKnown RBP11.03□□□□□ -0.64
TRIM39-206ENST00000420746 ZEB2O60315 1214 aa11.03□□□□□ -0.64
TRIM39-206ENST00000420746 SHMT1P34896 483 aa11.03□□□□□ -0.64
TRIM39-206ENST00000420746 STAT3P40763 770 aa11.03□□□□□ -0.64
TRIM39-206ENST00000420746 COL19A1Q14993 1142 aa11.03□□□□□ -0.64
TRIM39-206ENST00000420746 SEPT2Q15019 361 aa11.03□□□□□ -0.64
TRIM39-206ENST00000420746 CXCL17Q6UXB2 119 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms