RNA–Protein interactions for RNA: ENST00000420567.7

VAT1-202, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-202ENST00000420567 CPXCR1Q8N123 301 aa18.64■□□□□ 0.57
VAT1-202ENST00000420567 ENAHQ8N8S7 591 aaPredicted RBP18.64■□□□□ 0.57
VAT1-202ENST00000420567 USP6NLQ92738 828 aa18.64■□□□□ 0.57
VAT1-202ENST00000420567 RAVER2Q9HCJ3 691 aaKnown RBP18.64■□□□□ 0.57
VAT1-202ENST00000420567 PARP14Q460N5 1801 aa18.63■□□□□ 0.57
VAT1-202ENST00000420567 POTEFA5A3E0 1075 aa18.63■□□□□ 0.57
VAT1-202ENST00000420567 SLC15A5A6NIM6 579 aa18.63■□□□□ 0.57
VAT1-202ENST00000420567 UBXN2AP68543 259 aa18.63■□□□□ 0.57
VAT1-202ENST00000420567 TRIM32Q13049 653 aa18.63■□□□□ 0.57
VAT1-202ENST00000420567 GRB14Q14449 540 aa18.63■□□□□ 0.57
VAT1-202ENST00000420567 CCDC178Q5BJE1 867 aa18.63■□□□□ 0.57
VAT1-202ENST00000420567 SNRNP48Q6IEG0 339 aaKnown RBP18.63■□□□□ 0.57
VAT1-202ENST00000420567 TTBK2Q6IQ55 1244 aa18.63■□□□□ 0.57
VAT1-202ENST00000420567 RIOX2Q8IUF8 465 aa18.63■□□□□ 0.57
VAT1-202ENST00000420567 NCOA7Q8NI08 942 aa18.63■□□□□ 0.57
VAT1-202ENST00000420567 TRIB2Q92519 343 aa18.63■□□□□ 0.57
VAT1-202ENST00000420567 APBA2Q99767 749 aa18.63■□□□□ 0.57
VAT1-202ENST00000420567 TEX13BQ9BXU2 312 aa18.63■□□□□ 0.57
VAT1-202ENST00000420567 MROH8Q9H579 483 aa18.63■□□□□ 0.57
VAT1-202ENST00000420567 KAT14Q9H8E8 782 aa18.63■□□□□ 0.57
VAT1-202ENST00000420567 SLC38A10Q9HBR0 1119 aa18.63■□□□□ 0.57
VAT1-202ENST00000420567 GPCPD1Q9NPB8 672 aa18.63■□□□□ 0.57
VAT1-202ENST00000420567 SLC27A2O14975 620 aa18.62■□□□□ 0.57
VAT1-202ENST00000420567 SLC25A27O95847 323 aa18.62■□□□□ 0.57
VAT1-202ENST00000420567 PDHBP11177 359 aa18.62■□□□□ 0.57
VAT1-202ENST00000420567 ZKSCAN1P17029 563 aaPredicted RBP18.62■□□□□ 0.57
VAT1-202ENST00000420567 SLC16A2P36021 539 aa18.62■□□□□ 0.57
VAT1-202ENST00000420567 SNAP25P60880 206 aa18.62■□□□□ 0.57
VAT1-202ENST00000420567 CCL14Q16627 93 aa18.62■□□□□ 0.57
VAT1-202ENST00000420567 CREB3L3Q68CJ9 461 aa18.62■□□□□ 0.57
VAT1-202ENST00000420567 PNMA1Q8ND90 353 aa18.62■□□□□ 0.57
VAT1-202ENST00000420567 CHURC1Q8WUH1 139 aa18.62■□□□□ 0.57
VAT1-202ENST00000420567 TMEM106CQ9BVX2 250 aa18.62■□□□□ 0.57
VAT1-202ENST00000420567 PLXNB2O15031 1838 aa18.61■□□□□ 0.57
VAT1-202ENST00000420567 HMGCRP04035 888 aa18.61■□□□□ 0.57
VAT1-202ENST00000420567 CCL5P13501 91 aa18.61■□□□□ 0.57
VAT1-202ENST00000420567 ADORA2AP29274 412 aa18.61■□□□□ 0.57
VAT1-202ENST00000420567 CHST3Q7LGC8 479 aa18.61■□□□□ 0.57
VAT1-202ENST00000420567 ANKS1AQ92625 1134 aa18.61■□□□□ 0.57
VAT1-202ENST00000420567 UNC93B1Q9H1C4 597 aa18.61■□□□□ 0.57
VAT1-202ENST00000420567 PRR12Q9ULL5 1215 aa18.61■□□□□ 0.57
VAT1-202ENST00000420567 RIPK3Q9Y572 518 aa18.61■□□□□ 0.57
VAT1-202ENST00000420567 PLA2G6O60733 806 aa18.6■□□□□ 0.57
VAT1-202ENST00000420567 GOLGA8HP0CJ92 632 aa18.6■□□□□ 0.57
VAT1-202ENST00000420567 SNHG28P0DPA3 235 aa18.6■□□□□ 0.57
VAT1-202ENST00000420567 XRCC5P13010 732 aaKnown RBP18.6■□□□□ 0.57
VAT1-202ENST00000420567 ZNF543Q08ER8 600 aa18.6■□□□□ 0.57
VAT1-202ENST00000420567 NECTIN1Q15223 517 aa18.6■□□□□ 0.57
VAT1-202ENST00000420567 SEC23AQ15436 765 aa18.6■□□□□ 0.57
VAT1-202ENST00000420567 IFIT1BQ5T764 474 aaKnown RBP18.6■□□□□ 0.57
VAT1-202ENST00000420567 CCDC174Q6PII3 467 aa18.6■□□□□ 0.57
VAT1-202ENST00000420567 MB21D2Q8IYB1 491 aaPredicted RBP18.6■□□□□ 0.57
VAT1-202ENST00000420567 MMP19Q99542 508 aa18.6■□□□□ 0.57
VAT1-202ENST00000420567 HTTP42858 3142 aa18.6■□□□□ 0.57
VAT1-202ENST00000420567 IFIT3O14879 490 aaKnown RBP18.59■□□□□ 0.57
VAT1-202ENST00000420567 ATP2A1O14983 1001 aa18.59■□□□□ 0.57
VAT1-202ENST00000420567 COPB2P35606 906 aa18.59■□□□□ 0.57
VAT1-202ENST00000420567 ANTXR2P58335 489 aa18.59■□□□□ 0.57
VAT1-202ENST00000420567 SYDE2Q5VT97 1194 aa18.59■□□□□ 0.57
VAT1-202ENST00000420567 DPP9Q86TI2 863 aa18.59■□□□□ 0.57
VAT1-202ENST00000420567 NPLOC4Q8TAT6 608 aa18.59■□□□□ 0.57
VAT1-202ENST00000420567 RNF208Q9H0X6 261 aa18.59■□□□□ 0.57
VAT1-202ENST00000420567 FLRT1Q9NZU1 646 aa18.59■□□□□ 0.57
VAT1-202ENST00000420567 ZNF536O15090 1300 aa18.58■□□□□ 0.57
VAT1-202ENST00000420567 STRNO43815 780 aa18.58■□□□□ 0.56
VAT1-202ENST00000420567 COBLO75128 1261 aa18.58■□□□□ 0.56
VAT1-202ENST00000420567 PGK2P07205 417 aa18.58■□□□□ 0.56
VAT1-202ENST00000420567 HOXC6P09630 235 aa18.58■□□□□ 0.56
VAT1-202ENST00000420567 FCER1AP12319 257 aa18.58■□□□□ 0.56
VAT1-202ENST00000420567 TAL1P17542 331 aaPredicted RBP18.58■□□□□ 0.56
VAT1-202ENST00000420567 EN2P19622 333 aaPredicted RBP18.58■□□□□ 0.56
VAT1-202ENST00000420567 OAZ1P54368 228 aa18.58■□□□□ 0.56
VAT1-202ENST00000420567 COL9A3Q14050 684 aaPredicted RBP18.58■□□□□ 0.56
VAT1-202ENST00000420567 KCTD2Q14681 263 aa18.58■□□□□ 0.56
VAT1-202ENST00000420567 BTNL9Q6UXG8 535 aa18.58■□□□□ 0.56
VAT1-202ENST00000420567 AGBL1Q96MI9 1066 aa18.58■□□□□ 0.56
VAT1-202ENST00000420567 CPVLQ9H3G5 476 aa18.58■□□□□ 0.56
VAT1-202ENST00000420567 SENP2Q9HC62 589 aa18.58■□□□□ 0.56
VAT1-202ENST00000420567 HOMER2Q9NSB8 354 aa18.58■□□□□ 0.56
VAT1-202ENST00000420567 ERICH2A1L162 156 aa18.57■□□□□ 0.56
VAT1-202ENST00000420567 FDX1P10109 184 aa18.57■□□□□ 0.56
VAT1-202ENST00000420567 PRKAR2AP13861 404 aaKnown RBP18.57■□□□□ 0.56
VAT1-202ENST00000420567 TRMT44Q8IYL2 757 aaKnown RBP18.57■□□□□ 0.56
VAT1-202ENST00000420567 ABRAQ8N0Z2 381 aa18.57■□□□□ 0.56
VAT1-202ENST00000420567 COL11A1P12107 1806 aaPredicted RBP18.56■□□□□ 0.56
VAT1-202ENST00000420567 ZNF236Q9UL36 1845 aa18.56■□□□□ 0.56
VAT1-202ENST00000420567 RGS19P49795 217 aa18.56■□□□□ 0.56
VAT1-202ENST00000420567 WTAPQ15007 396 aa18.56■□□□□ 0.56
VAT1-202ENST00000420567 SART3Q15020 963 aaKnown RBP18.56■□□□□ 0.56
VAT1-202ENST00000420567 TMEM67Q5HYA8 995 aa18.56■□□□□ 0.56
VAT1-202ENST00000420567 GPATCH4Q5T3I0 446 aaKnown RBP18.56■□□□□ 0.56
VAT1-202ENST00000420567 RNF20Q5VTR2 975 aa18.56■□□□□ 0.56
VAT1-202ENST00000420567 UBA5Q9GZZ9 404 aa18.56■□□□□ 0.56
VAT1-202ENST00000420567 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.56■□□□□ 0.56
VAT1-202ENST00000420567 RANBP17Q9H2T7 1088 aaKnown RBP18.56■□□□□ 0.56
VAT1-202ENST00000420567 GPHNQ9NQX3 736 aaPredicted RBP18.56■□□□□ 0.56
VAT1-202ENST00000420567 PRC1O43663 620 aa18.55■□□□□ 0.56
VAT1-202ENST00000420567 PARP1P09874 1014 aaKnown RBP18.55■□□□□ 0.56
VAT1-202ENST00000420567 ALAS1P13196 640 aa18.55■□□□□ 0.56
VAT1-202ENST00000420567 CACNB2Q08289 660 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms