RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 KCTD2Q14681 263 aa12.82□□□□□ -0.36
RAPGEF1-205ENST00000419442 ALDH1L2Q3SY69 923 aa12.82□□□□□ -0.36
RAPGEF1-205ENST00000419442 MAMDC4Q6UXC1 1216 aa12.82□□□□□ -0.36
RAPGEF1-205ENST00000419442 OTOP2Q7RTS6 562 aa12.82□□□□□ -0.36
RAPGEF1-205ENST00000419442 SLC43A3Q8NBI5 491 aa12.82□□□□□ -0.36
RAPGEF1-205ENST00000419442 VWCEQ96DN2 955 aa12.82□□□□□ -0.36
RAPGEF1-205ENST00000419442 ZNF512BQ96KM6 892 aaPredicted RBP12.82□□□□□ -0.36
RAPGEF1-205ENST00000419442 PIH1D3Q9NQM4 214 aaKnown RBP12.82□□□□□ -0.36
RAPGEF1-205ENST00000419442 RFXAPO00287 272 aa12.81□□□□□ -0.36
RAPGEF1-205ENST00000419442 CTAGE5O15320 804 aa12.81□□□□□ -0.36
RAPGEF1-205ENST00000419442 CYP7A1P22680 504 aa12.81□□□□□ -0.36
RAPGEF1-205ENST00000419442 COPB2P35606 906 aa12.81□□□□□ -0.36
RAPGEF1-205ENST00000419442 USP5P45974 858 aa12.81□□□□□ -0.36
RAPGEF1-205ENST00000419442 NHLH1Q02575 133 aa12.81□□□□□ -0.36
RAPGEF1-205ENST00000419442 HLA-CQ95604 372 aa12.81□□□□□ -0.36
RAPGEF1-205ENST00000419442 KCNH6Q9H252 994 aa12.81□□□□□ -0.36
RAPGEF1-205ENST00000419442 GPR108Q9NPR9 543 aa12.81□□□□□ -0.36
RAPGEF1-205ENST00000419442 ZNF214Q9UL59 606 aaPredicted RBP12.81□□□□□ -0.36
RAPGEF1-205ENST00000419442 SLC4A7Q9Y6M7 1214 aa12.81□□□□□ -0.36
RAPGEF1-205ENST00000419442 UMODL1Q5DID0 1318 aa12.81□□□□□ -0.36
RAPGEF1-205ENST00000419442 DNAJC25-GNG10A0A024R161 153 aa12.8□□□□□ -0.36
RAPGEF1-205ENST00000419442 EPOPA6NHQ4 379 aa12.8□□□□□ -0.36
RAPGEF1-205ENST00000419442 WDR46O15213 610 aaKnown RBP12.8□□□□□ -0.36
RAPGEF1-205ENST00000419442 ADCY6O43306 1168 aa12.8□□□□□ -0.36
RAPGEF1-205ENST00000419442 C6orf222P0C671 652 aaPredicted RBP12.8□□□□□ -0.36
RAPGEF1-205ENST00000419442 SIAH1Q8IUQ4 282 aa12.8□□□□□ -0.36
RAPGEF1-205ENST00000419442 REPS2Q8NFH8 660 aa12.8□□□□□ -0.36
RAPGEF1-205ENST00000419442 WNT8AQ9H1J5 351 aa12.8□□□□□ -0.36
RAPGEF1-205ENST00000419442 HIPK3Q9H422 1215 aa12.8□□□□□ -0.36
RAPGEF1-205ENST00000419442 VCPKMTQ9H867 229 aa12.8□□□□□ -0.36
RAPGEF1-205ENST00000419442 TMX2Q9Y320 296 aa12.8□□□□□ -0.36
RAPGEF1-205ENST00000419442 ZNF318Q5VUA4 2279 aa12.79□□□□□ -0.36
RAPGEF1-205ENST00000419442 ATP2A2P16615 1042 aaKnown RBP12.79□□□□□ -0.36
RAPGEF1-205ENST00000419442 ZAP70P43403 619 aa12.79□□□□□ -0.36
RAPGEF1-205ENST00000419442 TTC39AQ5SRH9 613 aa12.79□□□□□ -0.36
RAPGEF1-205ENST00000419442 KRT40Q6A162 431 aa12.79□□□□□ -0.36
RAPGEF1-205ENST00000419442 TMED8Q6PL24 325 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF1-205ENST00000419442 TMEM179Q6ZVK1 233 aa12.79□□□□□ -0.36
RAPGEF1-205ENST00000419442 ZNF467Q7Z7K2 595 aaPredicted RBP12.79□□□□□ -0.36
RAPGEF1-205ENST00000419442 NOC4LQ9BVI4 516 aaKnown RBP12.79□□□□□ -0.36
RAPGEF1-205ENST00000419442 SPC25Q9HBM1 224 aa12.79□□□□□ -0.36
RAPGEF1-205ENST00000419442 MRS2Q9HD23 443 aa12.79□□□□□ -0.36
RAPGEF1-205ENST00000419442 SCN5AQ14524 2016 aa12.79□□□□□ -0.36
RAPGEF1-205ENST00000419442 PTPRSQ13332 1948 aa12.78□□□□□ -0.36
RAPGEF1-205ENST00000419442 CA3P07451 260 aa12.78□□□□□ -0.36
RAPGEF1-205ENST00000419442 STAT3P40763 770 aa12.78□□□□□ -0.36
RAPGEF1-205ENST00000419442 ACVR2BQ13705 512 aa12.78□□□□□ -0.36
RAPGEF1-205ENST00000419442 TMEM67Q5HYA8 995 aa12.78□□□□□ -0.36
RAPGEF1-205ENST00000419442 GNASQ5JWF2 1037 aa12.78□□□□□ -0.36
RAPGEF1-205ENST00000419442 CCDC158Q5M9N0 1113 aa12.78□□□□□ -0.36
RAPGEF1-205ENST00000419442 RPUSD2Q8IZ73 545 aaKnown RBP12.78□□□□□ -0.36
RAPGEF1-205ENST00000419442 MIGA1Q8NAN2 632 aa12.78□□□□□ -0.36
RAPGEF1-205ENST00000419442 VTI1AQ96AJ9 217 aa12.78□□□□□ -0.36
RAPGEF1-205ENST00000419442 DBNDD2Q9BQY9 259 aa12.78□□□□□ -0.36
RAPGEF1-205ENST00000419442 SEZ6LQ9BYH1 1024 aa12.78□□□□□ -0.36
RAPGEF1-205ENST00000419442 ZHX1Q9UKY1 873 aaPredicted RBP12.78□□□□□ -0.36
RAPGEF1-205ENST00000419442 VWA5AO00534 786 aa12.77□□□□□ -0.37
RAPGEF1-205ENST00000419442 PFKMP08237 780 aa12.77□□□□□ -0.37
RAPGEF1-205ENST00000419442 CCL23P55773 120 aa12.77□□□□□ -0.37
RAPGEF1-205ENST00000419442 TNNI3KQ59H18 835 aa12.77□□□□□ -0.37
RAPGEF1-205ENST00000419442 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.77□□□□□ -0.37
RAPGEF1-205ENST00000419442 SPICE1Q8N0Z3 855 aa12.77□□□□□ -0.37
RAPGEF1-205ENST00000419442 MAGEB6Q8N7X4 407 aa12.77□□□□□ -0.37
RAPGEF1-205ENST00000419442 FGD4Q96M96 766 aa12.77□□□□□ -0.37
RAPGEF1-205ENST00000419442 AGBL1Q96MI9 1066 aa12.77□□□□□ -0.37
RAPGEF1-205ENST00000419442 RIOK1Q9BRS2 568 aaKnown RBP12.77□□□□□ -0.37
RAPGEF1-205ENST00000419442 API5Q9BZZ5 524 aaKnown RBP12.77□□□□□ -0.37
RAPGEF1-205ENST00000419442 ABHD16BQ9H3Z7 469 aa12.77□□□□□ -0.37
RAPGEF1-205ENST00000419442 SH2D4AQ9H788 454 aa12.77□□□□□ -0.37
RAPGEF1-205ENST00000419442 ARHGEF10LQ9HCE6 1279 aa12.77□□□□□ -0.37
RAPGEF1-205ENST00000419442 SMC4Q9NTJ3 1288 aa12.77□□□□□ -0.37
RAPGEF1-205ENST00000419442 FBXO28Q9NVF7 368 aa12.77□□□□□ -0.37
RAPGEF1-205ENST00000419442 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.77□□□□□ -0.37
RAPGEF1-205ENST00000419442 PPP1R9AQ9ULJ8 1098 aa12.77□□□□□ -0.37
RAPGEF1-205ENST00000419442 FPGT-TNNI3KV9GXZ4 949 aa12.77□□□□□ -0.37
RAPGEF1-205ENST00000419442 GRIN2DO15399 1336 aa12.77□□□□□ -0.37
RAPGEF1-205ENST00000419442 TANC1Q9C0D5 1861 aa12.76□□□□□ -0.37
RAPGEF1-205ENST00000419442 MPHOSPH10O00566 681 aaKnown RBP12.76□□□□□ -0.37
RAPGEF1-205ENST00000419442 LPXNO60711 386 aa12.76□□□□□ -0.37
RAPGEF1-205ENST00000419442 CABYRO75952 493 aa12.76□□□□□ -0.37
RAPGEF1-205ENST00000419442 ARHGEF15O94989 841 aa12.76□□□□□ -0.37
RAPGEF1-205ENST00000419442 GNAI3P08754 354 aa12.76□□□□□ -0.37
RAPGEF1-205ENST00000419442 TAP1Q03518 808 aa12.76□□□□□ -0.37
RAPGEF1-205ENST00000419442 EVX2Q03828 476 aa12.76□□□□□ -0.37
RAPGEF1-205ENST00000419442 G3BP1Q13283 466 aaKnown RBP eCLIP12.76□□□□□ -0.37
RAPGEF1-205ENST00000419442 GRB10Q13322 594 aa12.76□□□□□ -0.37
RAPGEF1-205ENST00000419442 CCDC144BQ3MJ40 725 aa12.76□□□□□ -0.37
RAPGEF1-205ENST00000419442 FAM178BQ8IXR5 827 aa12.76□□□□□ -0.37
RAPGEF1-205ENST00000419442 FBXL18Q96ME1 805 aa12.76□□□□□ -0.37
RAPGEF1-205ENST00000419442 KATNBL1Q9H079 304 aa12.76□□□□□ -0.37
RAPGEF1-205ENST00000419442 CERS4Q9HA82 394 aa12.76□□□□□ -0.37
RAPGEF1-205ENST00000419442 ZBBXA8MT70 800 aa12.75□□□□□ -0.37
RAPGEF1-205ENST00000419442 E9PSI1 815 aa12.75□□□□□ -0.37
RAPGEF1-205ENST00000419442 ASTN1O14525 1302 aa12.75□□□□□ -0.37
RAPGEF1-205ENST00000419442 POLR3DP05423 398 aaPredicted RBP12.75□□□□□ -0.37
RAPGEF1-205ENST00000419442 ICA1Q05084 483 aa12.75□□□□□ -0.37
RAPGEF1-205ENST00000419442 TTLL4Q14679 1199 aa12.75□□□□□ -0.37
RAPGEF1-205ENST00000419442 CLEC10AQ8IUN9 316 aa12.75□□□□□ -0.37
RAPGEF1-205ENST00000419442 GJD3Q8N144 294 aa12.75□□□□□ -0.37
RAPGEF1-205ENST00000419442 PHOSPHO2Q8TCD6 241 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms