RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 INPP5BP32019 993 aa8.57□□□□□ -1.04
HMGN1-205ENST00000419378 IL15P40933 162 aaPredicted RBP8.57□□□□□ -1.04
HMGN1-205ENST00000419378 MMP14P50281 582 aa8.57□□□□□ -1.04
HMGN1-205ENST00000419378 ARSDP51689 593 aa8.57□□□□□ -1.04
HMGN1-205ENST00000419378 FKBP1AP62942 108 aaKnown RBP8.57□□□□□ -1.04
HMGN1-205ENST00000419378 NBPF9Q3BBW0 867 aa8.57□□□□□ -1.04
HMGN1-205ENST00000419378 CAVIN4Q5BKX8 364 aa8.57□□□□□ -1.04
HMGN1-205ENST00000419378 EFHC2Q5JST6 749 aa8.57□□□□□ -1.04
HMGN1-205ENST00000419378 FBXO33Q7Z6M2 555 aa8.57□□□□□ -1.04
HMGN1-205ENST00000419378 NLRP8Q86W28 1048 aa8.57□□□□□ -1.04
HMGN1-205ENST00000419378 VPS37DQ86XT2 251 aa8.57□□□□□ -1.04
HMGN1-205ENST00000419378 ITPRIPQ8IWB1 547 aa8.57□□□□□ -1.04
HMGN1-205ENST00000419378 LPIN2Q92539 896 aa8.57□□□□□ -1.04
HMGN1-205ENST00000419378 CEP63Q96MT8 703 aa8.57□□□□□ -1.04
HMGN1-205ENST00000419378 ZNF408Q9H9D4 720 aa8.57□□□□□ -1.04
HMGN1-205ENST00000419378 FAM13BQ9NYF5 915 aa8.57□□□□□ -1.04
HMGN1-205ENST00000419378 PITPNM2Q9BZ72 1349 aa8.56□□□□□ -1.04
HMGN1-205ENST00000419378 THSD7BQ9C0I4 1608 aa8.56□□□□□ -1.04
HMGN1-205ENST00000419378 PNMA6EA0A0J9YXQ4 647 aa8.56□□□□□ -1.04
HMGN1-205ENST00000419378 F8W031 263 aaPredicted RBP8.56□□□□□ -1.04
HMGN1-205ENST00000419378 WNT10BO00744 389 aa8.56□□□□□ -1.04
HMGN1-205ENST00000419378 LCE2BO14633 110 aa8.56□□□□□ -1.04
HMGN1-205ENST00000419378 THBS1P07996 1170 aa8.56□□□□□ -1.04
HMGN1-205ENST00000419378 IFIT1P09914 478 aaKnown RBP8.56□□□□□ -1.04
HMGN1-205ENST00000419378 SLC5A1P13866 664 aa8.56□□□□□ -1.04
HMGN1-205ENST00000419378 PCSK2P16519 638 aa8.56□□□□□ -1.04
HMGN1-205ENST00000419378 VEGFBP49765 207 aa8.56□□□□□ -1.04
HMGN1-205ENST00000419378 TYRO3Q06418 890 aa8.56□□□□□ -1.04
HMGN1-205ENST00000419378 ATP2B3Q16720 1220 aa8.56□□□□□ -1.04
HMGN1-205ENST00000419378 MFSD14BQ5SR56 506 aa8.56□□□□□ -1.04
HMGN1-205ENST00000419378 GJD3Q8N144 294 aa8.56□□□□□ -1.04
HMGN1-205ENST00000419378 CCDC155Q8N6L0 562 aa8.56□□□□□ -1.04
HMGN1-205ENST00000419378 PIK3R5Q8WYR1 880 aa8.56□□□□□ -1.04
HMGN1-205ENST00000419378 ZBED3Q96IU2 234 aaPredicted RBP8.56□□□□□ -1.04
HMGN1-205ENST00000419378 CUEDC1Q9NWM3 386 aaPredicted RBP8.56□□□□□ -1.04
HMGN1-205ENST00000419378 RCAN3Q9UKA8 241 aa8.56□□□□□ -1.04
HMGN1-205ENST00000419378 HDAC9Q9UKV0 1011 aa8.56□□□□□ -1.04
HMGN1-205ENST00000419378 COL1A1P02452 1464 aaPredicted RBP8.56□□□□□ -1.04
HMGN1-205ENST00000419378 ECM29Q5VYK3 1845 aa8.55□□□□□ -1.04
HMGN1-205ENST00000419378 MYH13Q9UKX3 1938 aa8.55□□□□□ -1.04
HMGN1-205ENST00000419378 USP5P45974 858 aa8.55□□□□□ -1.04
HMGN1-205ENST00000419378 CHAF1AQ13111 956 aaPredicted RBP8.55□□□□□ -1.04
HMGN1-205ENST00000419378 DLGAP5Q15398 846 aa8.55□□□□□ -1.04
HMGN1-205ENST00000419378 DEFB115Q30KQ5 88 aa8.55□□□□□ -1.04
HMGN1-205ENST00000419378 C8orf34Q49A92 452 aa8.55□□□□□ -1.04
HMGN1-205ENST00000419378 SAPCD2Q86UD0 394 aa8.55□□□□□ -1.04
HMGN1-205ENST00000419378 PANK1Q8TE04 598 aa8.55□□□□□ -1.04
HMGN1-205ENST00000419378 CDCA5Q96FF9 252 aa8.55□□□□□ -1.04
HMGN1-205ENST00000419378 FAM129BQ96TA1 746 aa8.55□□□□□ -1.04
HMGN1-205ENST00000419378 ZCCHC2Q9C0B9 1178 aaKnown RBP8.55□□□□□ -1.04
HMGN1-205ENST00000419378 SCAF8Q9UPN6 1271 aaKnown RBP8.55□□□□□ -1.04
HMGN1-205ENST00000419378 PCDHAC2Q9Y5I4 1007 aa8.55□□□□□ -1.04
HMGN1-205ENST00000419378 A6NHS1 94 aa8.54□□□□□ -1.04
HMGN1-205ENST00000419378 TREHO43280 583 aa8.54□□□□□ -1.04
HMGN1-205ENST00000419378 FRAT2O75474 233 aaPredicted RBP8.54□□□□□ -1.04
HMGN1-205ENST00000419378 IGHA2P01877 340 aa8.54□□□□□ -1.04
HMGN1-205ENST00000419378 RBM25P49756 843 aaKnown RBP8.54□□□□□ -1.04
HMGN1-205ENST00000419378 DBN1Q16643 649 aa8.54□□□□□ -1.04
HMGN1-205ENST00000419378 CFAP100Q494V2 611 aa8.54□□□□□ -1.04
HMGN1-205ENST00000419378 SAMD5Q5TGI4 173 aa8.54□□□□□ -1.04
HMGN1-205ENST00000419378 APOBEC3FQ8IUX4 373 aaKnown RBP8.54□□□□□ -1.04
HMGN1-205ENST00000419378 CMTR1Q8N1G2 835 aaKnown RBP8.54□□□□□ -1.04
HMGN1-205ENST00000419378 TBC1D22AQ8WUA7 517 aa8.54□□□□□ -1.04
HMGN1-205ENST00000419378 CAPNS2Q96L46 248 aa8.54□□□□□ -1.04
HMGN1-205ENST00000419378 DMRTB1Q96MA1 342 aa8.54□□□□□ -1.04
HMGN1-205ENST00000419378 NUCKS1Q9H1E3 243 aaKnown RBP8.54□□□□□ -1.04
HMGN1-205ENST00000419378 GBA2Q9HCG7 927 aaPredicted RBP8.54□□□□□ -1.04
HMGN1-205ENST00000419378 TTF2Q9UNY4 1162 aaKnown RBP8.54□□□□□ -1.04
HMGN1-205ENST00000419378 AOX1Q06278 1338 aa8.54□□□□□ -1.04
HMGN1-205ENST00000419378 WDR33Q9C0J8 1336 aaKnown RBP8.54□□□□□ -1.04
HMGN1-205ENST00000419378 PAPPA2Q9BXP8 1791 aa8.53□□□□□ -1.04
HMGN1-205ENST00000419378 A0A1B0GUL7 405 aa8.53□□□□□ -1.04
HMGN1-205ENST00000419378 GPR182O15218 404 aa8.53□□□□□ -1.04
HMGN1-205ENST00000419378 HSPA1AP0DMV8 641 aaKnown RBP8.53□□□□□ -1.04
HMGN1-205ENST00000419378 HSPA1BP0DMV9 641 aaKnown RBP8.53□□□□□ -1.04
HMGN1-205ENST00000419378 GRNP28799 593 aaKnown RBP8.53□□□□□ -1.04
HMGN1-205ENST00000419378 ADORA1P30542 326 aa8.53□□□□□ -1.04
HMGN1-205ENST00000419378 ECE1P42892 770 aa8.53□□□□□ -1.04
HMGN1-205ENST00000419378 HUNKP57058 714 aa8.53□□□□□ -1.04
HMGN1-205ENST00000419378 TFCP2Q12800 502 aa8.53□□□□□ -1.04
HMGN1-205ENST00000419378 LBRQ14739 615 aaKnown RBP8.53□□□□□ -1.04
HMGN1-205ENST00000419378 GRIK5Q16478 980 aa8.53□□□□□ -1.04
HMGN1-205ENST00000419378 CYP4F22Q6NT55 531 aa8.53□□□□□ -1.04
HMGN1-205ENST00000419378 TTC16Q8NEE8 873 aa8.53□□□□□ -1.04
HMGN1-205ENST00000419378 SSH3Q8TE77 659 aa8.53□□□□□ -1.04
HMGN1-205ENST00000419378 HHIPL1Q96JK4 782 aa8.53□□□□□ -1.04
HMGN1-205ENST00000419378 BRD7Q9NPI1 651 aa8.53□□□□□ -1.04
HMGN1-205ENST00000419378 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.53□□□□□ -1.04
HMGN1-205ENST00000419378 RBM47A0AV96 593 aaKnown RBP8.52□□□□□ -1.05
HMGN1-205ENST00000419378 CLRN2A0PK11 232 aa8.52□□□□□ -1.05
HMGN1-205ENST00000419378 ATXN7O15265 892 aaPredicted RBP8.52□□□□□ -1.05
HMGN1-205ENST00000419378 MYO1BO43795 1136 aa8.52□□□□□ -1.05
HMGN1-205ENST00000419378 PHKA1P46020 1223 aa8.52□□□□□ -1.05
HMGN1-205ENST00000419378 CRKP46108 304 aa8.52□□□□□ -1.05
HMGN1-205ENST00000419378 RBM5P52756 815 aaKnown RBP eCLIP8.52□□□□□ -1.05
HMGN1-205ENST00000419378 TIMM10P62072 90 aa8.52□□□□□ -1.05
HMGN1-205ENST00000419378 ATP8B2P98198 1209 aa8.52□□□□□ -1.05
HMGN1-205ENST00000419378 PLCB3Q01970 1234 aa8.52□□□□□ -1.05
HMGN1-205ENST00000419378 GRM1Q13255 1194 aa8.52□□□□□ -1.05
HMGN1-205ENST00000419378 G3BP1Q13283 466 aaKnown RBP eCLIP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms