RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 CCDC148Q8NFR7 591 aa17.06■□□□□ 0.32
SEMA3B-203ENST00000419007 CYP2D6P10635 497 aa17.06■□□□□ 0.32
SEMA3B-203ENST00000419007 EIF5P55010 431 aaKnown RBP17.06■□□□□ 0.32
SEMA3B-203ENST00000419007 OR8K1Q8NGG5 319 aa17.06■□□□□ 0.32
SEMA3B-203ENST00000419007 CWC15Q9P013 229 aaKnown RBP17.06■□□□□ 0.32
SEMA3B-203ENST00000419007 BCL9O00512 1426 aa17.06■□□□□ 0.32
SEMA3B-203ENST00000419007 BAZ2AQ9UIF9 1905 aaKnown RBP17.06■□□□□ 0.32
SEMA3B-203ENST00000419007 USP5P45974 858 aa17.06■□□□□ 0.32
SEMA3B-203ENST00000419007 CRKLP46109 303 aaKnown RBP17.06■□□□□ 0.32
SEMA3B-203ENST00000419007 TRIM14Q14142 442 aa17.06■□□□□ 0.32
SEMA3B-203ENST00000419007 SKIDA1Q1XH10 827 aa17.06■□□□□ 0.32
SEMA3B-203ENST00000419007 HINFPQ9BQA5 517 aa17.06■□□□□ 0.32
SEMA3B-203ENST00000419007 GBP3Q9H0R5 595 aa17.06■□□□□ 0.32
SEMA3B-203ENST00000419007 MAGEC2Q9UBF1 373 aaPredicted RBP17.06■□□□□ 0.32
SEMA3B-203ENST00000419007 LRRC10BA6NIK2 292 aa17.05■□□□□ 0.32
SEMA3B-203ENST00000419007 ZMYND10O75800 440 aa17.05■□□□□ 0.32
SEMA3B-203ENST00000419007 DDAH1O94760 285 aa17.05■□□□□ 0.32
SEMA3B-203ENST00000419007 C10orf67Q8IYJ2 551 aa17.05■□□□□ 0.32
SEMA3B-203ENST00000419007 CCDC87Q9NVE4 849 aa17.05■□□□□ 0.32
SEMA3B-203ENST00000419007 TIAM2Q8IVF5 1701 aa17.05■□□□□ 0.32
SEMA3B-203ENST00000419007 PMS1P54277 932 aaKnown RBP17.05■□□□□ 0.32
SEMA3B-203ENST00000419007 BICDL1Q6ZP65 573 aa17.05■□□□□ 0.32
SEMA3B-203ENST00000419007 ANKRD18AQ8IVF6 992 aa17.05■□□□□ 0.32
SEMA3B-203ENST00000419007 SHANK3Q9BYB0 1731 aa17.05■□□□□ 0.32
SEMA3B-203ENST00000419007 GTF2E1P29083 439 aaPredicted RBP17.04■□□□□ 0.32
SEMA3B-203ENST00000419007 CAGE1Q8TC20 777 aa17.04■□□□□ 0.32
SEMA3B-203ENST00000419007 REXO2Q9Y3B8 237 aaKnown RBP17.04■□□□□ 0.32
SEMA3B-203ENST00000419007 TULP2O00295 520 aa17.04■□□□□ 0.32
SEMA3B-203ENST00000419007 TRIM21P19474 475 aaKnown RBP17.04■□□□□ 0.32
SEMA3B-203ENST00000419007 UBA7P41226 1012 aa17.04■□□□□ 0.32
SEMA3B-203ENST00000419007 GOLGA5Q8TBA6 731 aa17.04■□□□□ 0.32
SEMA3B-203ENST00000419007 MYO1AQ9UBC5 1043 aa17.04■□□□□ 0.32
SEMA3B-203ENST00000419007 CCDC194A0A1B0GVG4 234 aa17.04■□□□□ 0.32
SEMA3B-203ENST00000419007 LRRIQ3A6PVS8 624 aaPredicted RBP17.04■□□□□ 0.32
SEMA3B-203ENST00000419007 H7C1D1 291 aa17.04■□□□□ 0.32
SEMA3B-203ENST00000419007 ACTN2P35609 894 aa17.04■□□□□ 0.32
SEMA3B-203ENST00000419007 MB21D1Q8N884 522 aa17.04■□□□□ 0.32
SEMA3B-203ENST00000419007 PYM1Q9BRP8 204 aaKnown RBP17.04■□□□□ 0.32
SEMA3B-203ENST00000419007 BRIP1Q9BX63 1249 aa17.04■□□□□ 0.32
SEMA3B-203ENST00000419007 LCMT1Q9UIC8 334 aa17.04■□□□□ 0.32
SEMA3B-203ENST00000419007 B4DLN1 442 aa17.03■□□□□ 0.32
SEMA3B-203ENST00000419007 IPO7O95373 1038 aaKnown RBP17.03■□□□□ 0.32
SEMA3B-203ENST00000419007 ATP1A1P05023 1023 aaKnown RBP17.03■□□□□ 0.32
SEMA3B-203ENST00000419007 MUM1L1Q5H9M0 696 aa17.03■□□□□ 0.32
SEMA3B-203ENST00000419007 DTHD1Q6ZMT9 781 aa17.03■□□□□ 0.32
SEMA3B-203ENST00000419007 IRF2BP1Q8IU81 584 aa17.03■□□□□ 0.32
SEMA3B-203ENST00000419007 GPIHBP1Q8IV16 184 aa17.03■□□□□ 0.32
SEMA3B-203ENST00000419007 BLIDQ8IZY5 108 aa17.03■□□□□ 0.32
SEMA3B-203ENST00000419007 SLIT2O94813 1529 aa17.03■□□□□ 0.32
SEMA3B-203ENST00000419007 NHSL1Q5SYE7 1610 aa17.03■□□□□ 0.32
SEMA3B-203ENST00000419007 STIM1Q13586 685 aa17.03■□□□□ 0.32
SEMA3B-203ENST00000419007 PFKFB3Q16875 520 aaPredicted RBP17.03■□□□□ 0.32
SEMA3B-203ENST00000419007 PARP10Q53GL7 1025 aa17.03■□□□□ 0.32
SEMA3B-203ENST00000419007 INTS5Q6P9B9 1019 aaKnown RBP17.03■□□□□ 0.32
SEMA3B-203ENST00000419007 ZNF384Q8TF68 577 aa17.03■□□□□ 0.32
SEMA3B-203ENST00000419007 TRIM34Q9BYJ4 488 aa17.03■□□□□ 0.32
SEMA3B-203ENST00000419007 FAM205AQ6ZU69 1335 aa17.03■□□□□ 0.32
SEMA3B-203ENST00000419007 TRIM66O15016 1216 aa17.02■□□□□ 0.32
SEMA3B-203ENST00000419007 FECHP22830 423 aa17.02■□□□□ 0.32
SEMA3B-203ENST00000419007 TUBB4BP68371 445 aa17.02■□□□□ 0.32
SEMA3B-203ENST00000419007 MMS19Q96T76 1030 aa17.02■□□□□ 0.32
SEMA3B-203ENST00000419007 ACBD3Q9H3P7 528 aa17.02■□□□□ 0.32
SEMA3B-203ENST00000419007 DISC1Q9NRI5 854 aa17.02■□□□□ 0.32
SEMA3B-203ENST00000419007 TFCP2L1Q9NZI6 479 aa17.02■□□□□ 0.32
SEMA3B-203ENST00000419007 SAR1BQ9Y6B6 198 aa17.02■□□□□ 0.32
SEMA3B-203ENST00000419007 NTSR2O95665 410 aa17.02■□□□□ 0.32
SEMA3B-203ENST00000419007 TRAPPC10P48553 1259 aa17.02■□□□□ 0.32
SEMA3B-203ENST00000419007 KAT14Q9H8E8 782 aa17.02■□□□□ 0.32
SEMA3B-203ENST00000419007 FEZ2Q9UHY8 353 aaPredicted RBP17.02■□□□□ 0.32
SEMA3B-203ENST00000419007 MACROD2A1Z1Q3 448 aa17.02■□□□□ 0.31
SEMA3B-203ENST00000419007 PSMA7O14818 248 aa17.02■□□□□ 0.31
SEMA3B-203ENST00000419007 LONP1P36776 959 aaKnown RBP17.02■□□□□ 0.31
SEMA3B-203ENST00000419007 AMPD2Q01433 879 aa17.02■□□□□ 0.31
SEMA3B-203ENST00000419007 INF2Q27J81 1249 aa17.02■□□□□ 0.31
SEMA3B-203ENST00000419007 GOLGA6L1Q8N7Z2 621 aa17.02■□□□□ 0.31
SEMA3B-203ENST00000419007 HAUS4Q9H6D7 363 aa17.02■□□□□ 0.31
SEMA3B-203ENST00000419007 AGPAT5Q9NUQ2 364 aa17.02■□□□□ 0.31
SEMA3B-203ENST00000419007 LGALS16A8MUM7 142 aa17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 CAMTA2O94983 1202 aa17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 KLRK1P26718 216 aa17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 KLK7P49862 253 aa17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 MECOMQ03112 1051 aa17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 C3orf67Q6ZVT6 689 aa17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 ADSSL1Q8N142 457 aa17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 CRNKL1Q9BZJ0 848 aaKnown RBP17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 JADE2Q9NQC1 790 aa17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 ZNHIT6Q9NWK9 470 aaKnown RBP17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 MCM9Q9NXL9 1143 aa17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 PHLPP1O60346 1717 aa17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 DOCK2Q92608 1830 aa17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 CALML3P27482 149 aa17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 KIF5BP33176 963 aa17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 CYP27A1Q02318 531 aa17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 HEATR3Q7Z4Q2 680 aa17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 GSPT2Q8IYD1 628 aaKnown RBP17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 STAG2Q8N3U4 1231 aa17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 CSGALNACT2Q8N6G5 542 aa17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 JAKMIP2Q96AA8 810 aa17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 FAM84BQ96KN1 310 aaPredicted RBP17.01■□□□□ 0.31
SEMA3B-203ENST00000419007 TMEM60Q9H2L4 133 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms