RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 ARHGEF6Q15052 776 aa12.42□□□□□ -0.42
RFC1-203ENST00000418436 RRP12Q5JTH9 1297 aaKnown RBP12.42□□□□□ -0.42
RFC1-203ENST00000418436 SPICE1Q8N0Z3 855 aa12.42□□□□□ -0.42
RFC1-203ENST00000418436 ANKRD13CQ8N6S4 541 aa12.42□□□□□ -0.42
RFC1-203ENST00000418436 GMCL1P1Q8NEA9 526 aa12.42□□□□□ -0.42
RFC1-203ENST00000418436 ARHGAP39Q9C0H5 1083 aa12.42□□□□□ -0.42
RFC1-203ENST00000418436 LSG1Q9H089 658 aaKnown RBP12.42□□□□□ -0.42
RFC1-203ENST00000418436 EFCC1Q9HA90 598 aa12.42□□□□□ -0.42
RFC1-203ENST00000418436 TXNRD2Q9NNW7 524 aa12.42□□□□□ -0.42
RFC1-203ENST00000418436 TOMM22Q9NS69 142 aa12.42□□□□□ -0.42
RFC1-203ENST00000418436 TRIM17Q9Y577 477 aa12.42□□□□□ -0.42
RFC1-203ENST00000418436 MYPNQ86TC9 1320 aa12.41□□□□□ -0.42
RFC1-203ENST00000418436 SPDYE16A6NNV3 312 aaPredicted RBP12.41□□□□□ -0.42
RFC1-203ENST00000418436 NDUFB10O96000 172 aa12.41□□□□□ -0.42
RFC1-203ENST00000418436 CYP21A2P08686 494 aa12.41□□□□□ -0.42
RFC1-203ENST00000418436 PSMC4P43686 418 aa12.41□□□□□ -0.42
RFC1-203ENST00000418436 KIAA1211Q6ZU35 1233 aa12.41□□□□□ -0.42
RFC1-203ENST00000418436 DOCK3Q8IZD9 2030 aa12.41□□□□□ -0.42
RFC1-203ENST00000418436 ESR2Q92731 530 aa12.41□□□□□ -0.42
RFC1-203ENST00000418436 TRIM47Q96LD4 638 aa12.41□□□□□ -0.42
RFC1-203ENST00000418436 HOXC10Q9NYD6 342 aa12.41□□□□□ -0.42
RFC1-203ENST00000418436 COL11A1P12107 1806 aaPredicted RBP12.41□□□□□ -0.42
RFC1-203ENST00000418436 CNMDO75829 334 aa12.4□□□□□ -0.42
RFC1-203ENST00000418436 PSEN2P49810 448 aa12.4□□□□□ -0.42
RFC1-203ENST00000418436 Q3C1V9 767 aa12.4□□□□□ -0.42
RFC1-203ENST00000418436 RCSD1Q6JBY9 416 aa12.4□□□□□ -0.42
RFC1-203ENST00000418436 FBXO46Q6PJ61 603 aaPredicted RBP12.4□□□□□ -0.42
RFC1-203ENST00000418436 CASC1Q6TDU7 716 aa12.4□□□□□ -0.42
RFC1-203ENST00000418436 LRRC47Q8N1G4 583 aaKnown RBP12.4□□□□□ -0.42
RFC1-203ENST00000418436 GPRC5AQ8NFJ5 357 aa12.4□□□□□ -0.42
RFC1-203ENST00000418436 TTC14Q96N46 770 aa12.4□□□□□ -0.42
RFC1-203ENST00000418436 KRT23Q9C075 422 aa12.4□□□□□ -0.42
RFC1-203ENST00000418436 TANGO6Q9C0B7 1094 aa12.4□□□□□ -0.42
RFC1-203ENST00000418436 CNNM2Q9H8M5 875 aa12.4□□□□□ -0.42
RFC1-203ENST00000418436 ADAMTS5Q9UNA0 930 aa12.4□□□□□ -0.42
RFC1-203ENST00000418436 STX8Q9UNK0 236 aa12.4□□□□□ -0.42
RFC1-203ENST00000418436 PTPN22Q9Y2R2 807 aa12.4□□□□□ -0.42
RFC1-203ENST00000418436 RABGAP1Q9Y3P9 1069 aa12.4□□□□□ -0.42
RFC1-203ENST00000418436 RBM8AQ9Y5S9 174 aaKnown RBP12.4□□□□□ -0.42
RFC1-203ENST00000418436 PLXNB2O15031 1838 aa12.39□□□□□ -0.43
RFC1-203ENST00000418436 B4E1Z4 1266 aa12.39□□□□□ -0.43
RFC1-203ENST00000418436 DPYSL4O14531 572 aa12.39□□□□□ -0.43
RFC1-203ENST00000418436 PEX10O60683 326 aa12.39□□□□□ -0.43
RFC1-203ENST00000418436 KDM4AO75164 1064 aa12.39□□□□□ -0.43
RFC1-203ENST00000418436 FLOT1O75955 427 aa12.39□□□□□ -0.43
RFC1-203ENST00000418436 FMNL1O95466 1100 aaPredicted RBP12.39□□□□□ -0.43
RFC1-203ENST00000418436 PRMT2P55345 433 aa12.39□□□□□ -0.43
RFC1-203ENST00000418436 FCGRTP55899 365 aa12.39□□□□□ -0.43
RFC1-203ENST00000418436 ERVK-9P63128 1117 aa12.39□□□□□ -0.43
RFC1-203ENST00000418436 ERVK-24P63145 666 aa12.39□□□□□ -0.43
RFC1-203ENST00000418436 NECTIN1Q15223 517 aa12.39□□□□□ -0.43
RFC1-203ENST00000418436 FAM83BQ5T0W9 1011 aa12.39□□□□□ -0.43
RFC1-203ENST00000418436 SLFN13Q68D06 897 aa12.39□□□□□ -0.43
RFC1-203ENST00000418436 ANKS1AQ92625 1134 aa12.39□□□□□ -0.43
RFC1-203ENST00000418436 ABHD8Q96I13 439 aa12.39□□□□□ -0.43
RFC1-203ENST00000418436 GMCL1Q96IK5 515 aa12.39□□□□□ -0.43
RFC1-203ENST00000418436 TMEM47Q9BQJ4 181 aa12.39□□□□□ -0.43
RFC1-203ENST00000418436 BTBD7Q9P203 1132 aa12.39□□□□□ -0.43
RFC1-203ENST00000418436 ZSWIM5Q9P217 1185 aa12.39□□□□□ -0.43
RFC1-203ENST00000418436 SRRDQ9UH36 339 aa12.39□□□□□ -0.43
RFC1-203ENST00000418436 TAF6LQ9Y6J9 622 aa12.39□□□□□ -0.43
RFC1-203ENST00000418436 E7EWF7 191 aa12.38□□□□□ -0.43
RFC1-203ENST00000418436 TOP1P11387 765 aaKnown RBP12.38□□□□□ -0.43
RFC1-203ENST00000418436 HOXD10P28358 340 aa12.38□□□□□ -0.43
RFC1-203ENST00000418436 CCDC178Q5BJE1 867 aa12.38□□□□□ -0.43
RFC1-203ENST00000418436 DMRTA1Q5VZB9 504 aa12.38□□□□□ -0.43
RFC1-203ENST00000418436 STOX1Q6ZVD7 989 aa12.38□□□□□ -0.43
RFC1-203ENST00000418436 DGKHQ86XP1 1220 aa12.38□□□□□ -0.43
RFC1-203ENST00000418436 MB21D1Q8N884 522 aa12.38□□□□□ -0.43
RFC1-203ENST00000418436 RNF166Q96A37 237 aaPredicted RBP12.38□□□□□ -0.43
RFC1-203ENST00000418436 ATG4CQ96DT6 458 aa12.38□□□□□ -0.43
RFC1-203ENST00000418436 NUP88Q99567 741 aaPredicted RBP12.38□□□□□ -0.43
RFC1-203ENST00000418436 PAGR1Q9BTK6 254 aa12.38□□□□□ -0.43
RFC1-203ENST00000418436 ANO2Q9NQ90 1003 aa12.38□□□□□ -0.43
RFC1-203ENST00000418436 FBXO28Q9NVF7 368 aa12.38□□□□□ -0.43
RFC1-203ENST00000418436 PPP1R9AQ9ULJ8 1098 aa12.38□□□□□ -0.43
RFC1-203ENST00000418436 TNPO2O14787 897 aaKnown RBP12.37□□□□□ -0.43
RFC1-203ENST00000418436 SLC27A2O14975 620 aa12.37□□□□□ -0.43
RFC1-203ENST00000418436 RAD21O60216 631 aa12.37□□□□□ -0.43
RFC1-203ENST00000418436 PLA2G6O60733 806 aa12.37□□□□□ -0.43
RFC1-203ENST00000418436 BMP3P12645 472 aa12.37□□□□□ -0.43
RFC1-203ENST00000418436 ADGRD1Q6QNK2 874 aa12.37□□□□□ -0.43
RFC1-203ENST00000418436 IQCA1Q86XH1 822 aa12.37□□□□□ -0.43
RFC1-203ENST00000418436 ZSCAN10Q96SZ4 725 aaPredicted RBP12.37□□□□□ -0.43
RFC1-203ENST00000418436 KCNK17Q96T54 332 aa12.37□□□□□ -0.43
RFC1-203ENST00000418436 ZKSCAN3Q9BRR0 538 aa12.37□□□□□ -0.43
RFC1-203ENST00000418436 PORCNQ9H237 461 aa12.37□□□□□ -0.43
RFC1-203ENST00000418436 FEM1BQ9UK73 627 aa12.37□□□□□ -0.43
RFC1-203ENST00000418436 HPS5Q9UPZ3 1129 aa12.37□□□□□ -0.43
RFC1-203ENST00000418436 HTTP42858 3142 aa12.36□□□□□ -0.43
RFC1-203ENST00000418436 TK2O00142 265 aa12.36□□□□□ -0.43
RFC1-203ENST00000418436 VWA5AO00534 786 aa12.36□□□□□ -0.43
RFC1-203ENST00000418436 MCCP23508 829 aa12.36□□□□□ -0.43
RFC1-203ENST00000418436 MAPK4P31152 587 aa12.36□□□□□ -0.43
RFC1-203ENST00000418436 CCNA1P78396 465 aa12.36□□□□□ -0.43
RFC1-203ENST00000418436 TRDNQ13061 729 aa12.36□□□□□ -0.43
RFC1-203ENST00000418436 CREB3L3Q68CJ9 461 aa12.36□□□□□ -0.43
RFC1-203ENST00000418436 CYB5R4Q7L1T6 521 aa12.36□□□□□ -0.43
RFC1-203ENST00000418436 ENAHQ8N8S7 591 aaPredicted RBP12.36□□□□□ -0.43
RFC1-203ENST00000418436 PRPF38AQ8NAV1 312 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms