RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.35■■□□□ 1.491e-6■■■□□ 16
PKNOX1-202ENST00000418336 NCAPG2Q86XI2 1143 aa24.35■■□□□ 1.49
PKNOX1-202ENST00000418336 CCAR1Q8IX12 1150 aaKnown RBP24.35■■□□□ 1.49
PKNOX1-202ENST00000418336 TRMT44Q8IYL2 757 aaKnown RBP24.35■■□□□ 1.49
PKNOX1-202ENST00000418336 TMEM232C9JQI7 657 aa24.34■■□□□ 1.49
PKNOX1-202ENST00000418336 TOP1P11387 765 aaKnown RBP24.34■■□□□ 1.49
PKNOX1-202ENST00000418336 PRKAR2AP13861 404 aaKnown RBP24.34■■□□□ 1.49
PKNOX1-202ENST00000418336 ZKSCAN1P17029 563 aaPredicted RBP24.34■■□□□ 1.49
PKNOX1-202ENST00000418336 NT5C2P49902 561 aa24.34■■□□□ 1.49
PKNOX1-202ENST00000418336 MNX1P50219 401 aaPredicted RBP24.34■■□□□ 1.49
PKNOX1-202ENST00000418336 KIFC2Q96AC6 838 aa24.34■■□□□ 1.49
PKNOX1-202ENST00000418336 TTC14Q96N46 770 aa24.34■■□□□ 1.49
PKNOX1-202ENST00000418336 TOMM22Q9NS69 142 aa24.34■■□□□ 1.49
PKNOX1-202ENST00000418336 CYP21A2P08686 494 aa24.33■■□□□ 1.49
PKNOX1-202ENST00000418336 SNHG28P0DPA3 235 aa24.33■■□□□ 1.49
PKNOX1-202ENST00000418336 SLC1A4P43007 532 aa24.33■■□□□ 1.49
PKNOX1-202ENST00000418336 BMP2KLQ5H9B9 411 aa24.33■■□□□ 1.49
PKNOX1-202ENST00000418336 KCTD1Q719H9 257 aa24.33■■□□□ 1.49
PKNOX1-202ENST00000418336 TRPV1Q8NER1 839 aa24.33■■□□□ 1.49
PKNOX1-202ENST00000418336 ANKS1AQ92625 1134 aa24.33■■□□□ 1.49
PKNOX1-202ENST00000418336 DEFB118Q96PH6 123 aa24.33■■□□□ 1.49
PKNOX1-202ENST00000418336 TEX13BQ9BXU2 312 aa24.33■■□□□ 1.49
PKNOX1-202ENST00000418336 CTNNA3Q9UI47 895 aa24.33■■□□□ 1.49
PKNOX1-202ENST00000418336 IVNS1ABPQ9Y6Y0 642 aa24.33■■□□□ 1.49
PKNOX1-202ENST00000418336 KDM4AO75164 1064 aa24.32■■□□□ 1.48
PKNOX1-202ENST00000418336 CCND3P30281 292 aaPredicted RBP24.32■■□□□ 1.48
PKNOX1-202ENST00000418336 STAT2P52630 851 aa24.32■■□□□ 1.48
PKNOX1-202ENST00000418336 IMMTQ16891 758 aaKnown RBP24.32■■□□□ 1.48
PKNOX1-202ENST00000418336 OLFML2BQ68BL8 750 aa24.32■■□□□ 1.48
PKNOX1-202ENST00000418336 BTNL9Q6UXG8 535 aa24.32■■□□□ 1.48
PKNOX1-202ENST00000418336 DCAF4Q8WV16 495 aa24.32■■□□□ 1.48
PKNOX1-202ENST00000418336 RUFY2Q8WXA3 655 aa24.32■■□□□ 1.48
PKNOX1-202ENST00000418336 ESR2Q92731 530 aa24.32■■□□□ 1.48
PKNOX1-202ENST00000418336 CHMP4CQ96CF2 233 aa24.32■■□□□ 1.48
PKNOX1-202ENST00000418336 ZKSCAN3Q9BRR0 538 aa24.32■■□□□ 1.48
PKNOX1-202ENST00000418336 ZSWIM5Q9P217 1185 aa24.32■■□□□ 1.48
PKNOX1-202ENST00000418336 FRMPD3Q5JV73 1810 aa24.31■■□□□ 1.48
PKNOX1-202ENST00000418336 B4E1Z4 1266 aa24.31■■□□□ 1.48
PKNOX1-202ENST00000418336 PDHBP11177 359 aa24.31■■□□□ 1.48
PKNOX1-202ENST00000418336 OAZ1P54368 228 aa24.31■■□□□ 1.48
PKNOX1-202ENST00000418336 LHX8Q68G74 356 aa24.31■■□□□ 1.48
PKNOX1-202ENST00000418336 SNRNP48Q6IEG0 339 aaKnown RBP24.31■■□□□ 1.48
PKNOX1-202ENST00000418336 TTBK2Q6IQ55 1244 aa24.31■■□□□ 1.48
PKNOX1-202ENST00000418336 DGKHQ86XP1 1220 aa24.31■■□□□ 1.48
PKNOX1-202ENST00000418336 MAP4K1Q92918 833 aa24.31■■□□□ 1.48
PKNOX1-202ENST00000418336 RAVER2Q9HCJ3 691 aaKnown RBP24.31■■□□□ 1.48
PKNOX1-202ENST00000418336 HMX1Q9NP08 348 aaPredicted RBP24.31■■□□□ 1.48
PKNOX1-202ENST00000418336 PLXNA1Q9UIW2 1896 aa24.3■■□□□ 1.48
PKNOX1-202ENST00000418336 ZNF792Q3KQV3 632 aa24.3■■□□□ 1.48
PKNOX1-202ENST00000418336 STOX1Q6ZVD7 989 aa24.3■■□□□ 1.48
PKNOX1-202ENST00000418336 FAM160B2Q86V87 743 aa24.3■■□□□ 1.48
PKNOX1-202ENST00000418336 MAML3Q96JK9 1138 aa24.3■■□□□ 1.48
PKNOX1-202ENST00000418336 LSG1Q9H089 658 aaKnown RBP24.3■■□□□ 1.48
PKNOX1-202ENST00000418336 CWC22Q9HCG8 908 aaKnown RBP24.3■■□□□ 1.48
PKNOX1-202ENST00000418336 PRR12Q9ULL5 1215 aa24.3■■□□□ 1.48
PKNOX1-202ENST00000418336 SMCHD1A6NHR9 2005 aa24.3■■□□□ 1.48
PKNOX1-202ENST00000418336 DNAJC25-GNG10A0A024R161 153 aa24.29■■□□□ 1.48
PKNOX1-202ENST00000418336 FCER1AP12319 257 aa24.29■■□□□ 1.48
PKNOX1-202ENST00000418336 CYBAP13498 195 aa24.29■■□□□ 1.48
PKNOX1-202ENST00000418336 CYP2C19P33261 490 aa24.29■■□□□ 1.48
PKNOX1-202ENST00000418336 COPB2P35606 906 aa24.29■■□□□ 1.48
PKNOX1-202ENST00000418336 CYB5R4Q7L1T6 521 aa24.29■■□□□ 1.48
PKNOX1-202ENST00000418336 ENAHQ8N8S7 591 aaPredicted RBP24.29■■□□□ 1.48
PKNOX1-202ENST00000418336 MMP19Q99542 508 aa24.29■■□□□ 1.48
PKNOX1-202ENST00000418336 ZBED4O75132 1171 aa24.28■■□□□ 1.48
PKNOX1-202ENST00000418336 PGK2P07205 417 aa24.28■■□□□ 1.48
PKNOX1-202ENST00000418336 DPP9Q86TI2 863 aa24.28■■□□□ 1.48
PKNOX1-202ENST00000418336 CPXCR1Q8N123 301 aa24.28■■□□□ 1.48
PKNOX1-202ENST00000418336 CHURC1Q8WUH1 139 aa24.28■■□□□ 1.48
PKNOX1-202ENST00000418336 FGD4Q96M96 766 aa24.28■■□□□ 1.48
PKNOX1-202ENST00000418336 ESYT1Q9BSJ8 1104 aa24.28■■□□□ 1.48
PKNOX1-202ENST00000418336 OGDHLQ9ULD0 1010 aa24.28■■□□□ 1.48
PKNOX1-202ENST00000418336 FDX1P10109 184 aa24.27■■□□□ 1.48
PKNOX1-202ENST00000418336 CAPN2P17655 700 aa24.27■■□□□ 1.48
PKNOX1-202ENST00000418336 SNAP25P60880 206 aa24.27■■□□□ 1.48
PKNOX1-202ENST00000418336 SEC23AQ15436 765 aa24.27■■□□□ 1.48
PKNOX1-202ENST00000418336 AGBL1Q96MI9 1066 aa24.27■■□□□ 1.48
PKNOX1-202ENST00000418336 ZSCAN10Q96SZ4 725 aaPredicted RBP24.27■■□□□ 1.48
PKNOX1-202ENST00000418336 RANBP17Q9H2T7 1088 aaKnown RBP24.27■■□□□ 1.48
PKNOX1-202ENST00000418336 U3KPZ7 1027 aaPredicted RBP24.27■■□□□ 1.48
PKNOX1-202ENST00000418336 SLC16A2P36021 539 aa24.26■■□□□ 1.47
PKNOX1-202ENST00000418336 ZNF543Q08ER8 600 aa24.26■■□□□ 1.47
PKNOX1-202ENST00000418336 COL9A3Q14050 684 aaPredicted RBP24.26■■□□□ 1.47
PKNOX1-202ENST00000418336 DIS3LQ8TF46 1054 aaKnown RBP24.26■■□□□ 1.47
PKNOX1-202ENST00000418336 KRT23Q9C075 422 aa24.26■■□□□ 1.47
PKNOX1-202ENST00000418336 DIS3Q9Y2L1 958 aaKnown RBP24.26■■□□□ 1.47
PKNOX1-202ENST00000418336 TNKSO95271 1327 aa24.26■■□□□ 1.47
PKNOX1-202ENST00000418336 FRMPD2Q68DX3 1309 aaPredicted RBP24.26■■□□□ 1.47
PKNOX1-202ENST00000418336 LCTP09848 1927 aa24.25■■□□□ 1.47
PKNOX1-202ENST00000418336 TAL1P17542 331 aaPredicted RBP24.25■■□□□ 1.47
PKNOX1-202ENST00000418336 MFSD14CQ5VZR4 134 aa24.25■■□□□ 1.47
PKNOX1-202ENST00000418336 CCDC136Q96JN2 1154 aa24.25■■□□□ 1.47
PKNOX1-202ENST00000418336 CNNM2Q9H8M5 875 aa24.25■■□□□ 1.47
PKNOX1-202ENST00000418336 MTMR7Q9Y216 660 aa24.25■■□□□ 1.47
PKNOX1-202ENST00000418336 RBM8AQ9Y5S9 174 aaKnown RBP24.25■■□□□ 1.47
PKNOX1-202ENST00000418336 ALPK3Q96L96 1907 aa24.25■■□□□ 1.47
PKNOX1-202ENST00000418336 FARP2O94887 1054 aaPredicted RBP24.24■■□□□ 1.47
PKNOX1-202ENST00000418336 TFRCP02786 760 aaKnown RBP24.24■■□□□ 1.47
PKNOX1-202ENST00000418336 KCTD2Q14681 263 aa24.24■■□□□ 1.47
PKNOX1-202ENST00000418336 CHST13Q8NET6 341 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms